LOCUS       NM_001099319            1139 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus transmembrane protein 35B (Tmem35b), mRNA.
ACCESSION   NM_001099319 XM_001474551
VERSION     NM_001099319.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1139)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL606985.26.
            
            On Jun 1, 2013 this sequence version replaced NM_001099319.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV045754.1, AK156456.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-151               AL606985.26        179280-179430
            152-332             AL606985.26        181056-181236
            333-1139            AL606985.26        182091-182897
FEATURES             Location/Qualifiers
     source          1..1139
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 61.29 cM"
     gene            1..1139
                     /gene="Tmem35b"
                     /gene_synonym="Gm12942; Zmym6nb"
                     /note="transmembrane protein 35B"
                     /db_xref="GeneID:100039968"
                     /db_xref="MGI:MGI:3758095"
     exon            1..151
                     /gene="Tmem35b"
                     /gene_synonym="Gm12942; Zmym6nb"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..499
                     /gene="Tmem35b"
                     /gene_synonym="Gm12942; Zmym6nb"
                     /note="ZMYM6 neighbor protein"
                     /codon_start=1
                     /product="transmembrane protein 35B precursor"
                     /protein_id="NP_001092789.1"
                     /db_xref="CCDS:CCDS38882.1"
                     /db_xref="GeneID:100039968"
                     /db_xref="MGI:MGI:3758095"
                     /translation="MSFRVGVLRVLLGVFFALTGAAKLFQVSAPVSQQMRALFEQFAE
                     VFPLKVFGYQPDPISYQTAVGWLELLAGLLLVVGPPVLQEISNVLLILLMMGAVFTLV
                     VLKEPLSTYVPAAVCLGLLLLLDSCHFLARTKGAVRCPSKKIPPAHGN"
     exon            152..332
                     /gene="Tmem35b"
                     /gene_synonym="Gm12942; Zmym6nb"
                     /inference="alignment:Splign:2.1.0"
     exon            333..1139
                     /gene="Tmem35b"
                     /gene_synonym="Gm12942; Zmym6nb"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1105..1110
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem35b"
                     /gene_synonym="Gm12942; Zmym6nb"
                     /note="hexamer: AATAAA"
     polyA_site      1123
                     /gene="Tmem35b"
                     /gene_synonym="Gm12942; Zmym6nb"
                     /note="major polyA site"
ORIGIN      
        1 gtcttccggt agggaggaag agtcgtccag gaaggcgggc gctgctatgt cgttcagggt
       61 aggcgtgttg cgggttctgc ttggcgtctt cttcgcgctc accggggctg ccaagctctt
      121 tcaggtctcg gcccccgtgt cacaacagat gagagccttg ttcgagcagt ttgctgaggt
      181 gtttccattg aaggtgttcg gctaccagcc agaccctata agctaccaga cagctgtggg
      241 atggctggaa ctgctggctg ggttgctgct ggtcgtgggt ccacctgtgc tacaggagat
      301 cagtaacgtg ctcttgatcc tactcatgat gggggctgtc ttcactctgg tggttctgaa
      361 agagccactg agtacttacg tcccagctgc tgtctgtctg gggctcctgc tgctgctgga
      421 ttcctgccac ttcttagctc gtactaaggg agcggtcaga tgcccgagca agaagattcc
      481 tcctgcacac ggcaattgag tcttcagacc atgtagctac cacggcagga acagtcacag
      541 cacaccatct accactttgt caggtccaca gtcattcagt gtaaaagagc tgtcttgtct
      601 aggcctcagt ctcccctaat aactatgttg ctctgttttg agggcagcat taatactttt
      661 catgtgacat gaaaacagga agtaagtggg aaagaagcta aaaccactcc aaattctaat
      721 gccccatgag taatcttctc aatgttttgg tgtgactgtg cctcgccatc tttttctatg
      781 attatataaa gatgcatatt tttttaaatg aaatgagaca gtatagccta ttgtccaccg
      841 ttaagatcca gagttcttta acatgactca tgtttttatt tcatcaatgt tcatggcttt
      901 tactctgttc atcatgctga ggatgaagaa gtggctgaag cgctaggagc acttgctgct
      961 tgtgcaaagg gcctgggttc agttcccagc atcctcatgg cggctcataa ccctctacat
     1021 ctggtttcag aggatctggc accctctcct ggccttttgg agcaccagac atgctcatag
     1081 tatgcaaagc acttatgcac ataaaataaa cgtttttaaa ggctgtgttg tacttcgtc
//
