LOCUS       NM_027651               1382 bp    mRNA    linear   ROD 05-FEB-2024
DEFINITION  Mus musculus transmembrane protein 30C (Tmem30c), mRNA.
ACCESSION   NM_027651 XM_001479265 XM_001481138
VERSION     NM_027651.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1382)
  AUTHORS   Horiuchi,K., Perez-Cerezales,S., Papasaikas,P., Ramos-Ibeas,P.,
            Lopez-Cardona,A.P., Laguna-Barraza,R., Fonseca Balvis,N.,
            Pericuesta,E., Fernandez-Gonzalez,R., Planells,B., Viera,A.,
            Suja,J.A., Ross,P.J., Alen,F., Orio,L., Rodriguez de Fonseca,F.,
            Pintado,B., Valcarcel,J. and Gutierrez-Adan,A.
  TITLE     Impaired Spermatogenesis, Muscle, and Erythrocyte Function in U12
            Intron Splicing-Defective Zrsr1 Mutant Mice
  JOURNAL   Cell Rep 23 (1), 143-155 (2018)
   PUBMED   29617656
REFERENCE   2  (bases 1 to 1382)
  AUTHORS   Xu,P. and Ding,X.
  TITLE     Characterization and expression of mouse Cdc50c during
            spermatogenesis
  JOURNAL   Acta Biochim Biophys Sin (Shanghai) 39 (10), 739-744 (2007)
   PUBMED   17928922
  REMARK    GeneRIF: mRNA localized in pachytene spermatocytes and round and
            elongated spermatids; involved in spermatogenesis.  [Cdc50c]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK161475.1, AK016597.1 and CT025521.10.
            
            On or before Jun 25, 2009 this sequence version replaced
            XM_001479265.1, XM_001481138.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK016597.1, SRR5189685.133465.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                AK161475.1         2-58
            58-846              AK161475.1         1922-2710
            847-930             AK016597.1         861-944
            931-1382            CT025521.10        89832-90283         c
FEATURES             Location/Qualifiers
     source          1..1382
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 34.22 cM"
     gene            1..1382
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /note="transmembrane protein 30C"
                     /db_xref="GeneID:71027"
                     /db_xref="MGI:MGI:1918277"
     exon            1..57
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
     exon            58..274
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
     CDS             83..1111
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /codon_start=1
                     /product="cell cycle control protein 50C"
                     /protein_id="NP_081927.1"
                     /db_xref="CCDS:CCDS49876.1"
                     /db_xref="GeneID:71027"
                     /db_xref="MGI:MGI:1918277"
                     /translation="MEMMPQYDLSRLPENTALKQQTLPTQQLNLSASVVLSIFFITGG
                     FCLSIGIILLLSAKSTKKIEINYTKTCANCAQLRENSSNFDKACNCSLPFYLPEKMEG
                     DVYMYYKLYGFYQNLYQYILSRSNSQLVGKDIWDTTNCDPFQVSHNDTPIIPCGAIAN
                     SIFNDTITLSYNLNSSTQIEVPMLKSGLTWWTDKYVKFRNPRSSNFTSTFAGSSKPLH
                     WAKPIYELDLDDPGNNGFLNEDFIVWMRTAAFPTFKKLYRRLKRVHAFAEGLPAGNYS
                     LSISYNFPVTMFQGEKSIVLSTLTWIGGGGLFLGLTYTVTGALTLLASFAILTIHLML
                     KRSKLNFL"
     exon            275..385
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
     exon            386..487
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
     exon            488..575
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
     exon            576..716
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
     exon            717..926
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
     exon            927..1382
                     /gene="Tmem30c"
                     /gene_synonym="4933401B01Rik; 4933409A18Rik; Cdc50c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaactctac tgggacactg gctggactct gcagattggg acttcacctc tatactttat
       61 gtgagttacc cacaggacca agatggagat gatgccccag tatgacctgt ccagactgcc
      121 agaaaacaca gcattgaaac agcaaacgtt gcccacccag cagctaaatc tatctgcctc
      181 ggtggtcctc tctatctttt tcatcacagg aggattctgc ctctctatag gcatcatcct
      241 tctgttgtct gcaaagagca ccaagaaaat tgagataaat tacacaaaga cgtgtgcgaa
      301 ttgcgctcag ctccgggaaa atagttctaa ttttgacaaa gcatgcaact gttctcttcc
      361 tttttacctt ccggagaaaa tggagggtga tgtttatatg tactacaaac tgtatggttt
      421 ctatcagaat ctctatcaat atatcttatc aagaagcaat agccaattgg tgggtaagga
      481 tatttgggat actacgaact gtgatccgtt ccaagtgtcc cacaatgaca ctcccatcat
      541 tccttgtggt gcaattgcca acagcatatt caatgatacc ataactcttt catacaacct
      601 gaattcatct acacagatag aagtcccaat gctaaagagt gggcttacat ggtggacaga
      661 taagtatgtc aaatttcgga atccaagatc cagtaacttc accagtacat ttgcaggaag
      721 ttcgaagcct ctgcactggg ccaaacctat ctatgaactg gatctagatg acccagggaa
      781 caatggcttt ctcaatgagg acttcattgt gtggatgcgg acggctgcct ttcccacttt
      841 caaaaaactg taccgccgac tgaagcgcgt gcacgccttc gctgaaggct tacctgctgg
      901 taactacagt ttgagcatct cctacaactt tccagtaacc atgttccaag gagaaaagtc
      961 cattgtcctt tccactctga catggatcgg gggaggaggc cttttcttgg ggctgactta
     1021 cacagtgacg ggggcactga cgctgttggc ctcttttgcc atcctgacga ttcacttgat
     1081 gctgaaaagg agtaaactga atttcctgta gaggtggtgt ccagatttaa agagaagaag
     1141 agcagaaggc agcagcagac aatggagtga tagacccaaa gatccctggc aaagcttgaa
     1201 gagttcctga gccacctcaa ggaggagtgc tggattgatg gaatccaata taatcctaac
     1261 tacaaggata aatgacgagg ttcccagagt gtgtgtgggg ggggggggag gaggagcaaa
     1321 taaaaaaata tatgtacagt aaaatgttct tggaataaag atgagaaatg tttttgaact
     1381 ct
//
