LOCUS       NM_172600               5210 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus transmembrane protein 260 (Tmem260), transcript
            variant 1, mRNA.
ACCESSION   NM_172600
VERSION     NM_172600.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5210)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 5210)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK141246.1, AK032809.1 and BC059217.1.
            
            On Jul 16, 2015 this sequence version replaced NM_172600.3.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC059217.1, AK032809.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-30                AK141246.1         2-31
            31-2494             AK032809.1         2-2465
            2495-5210           BC059217.1         2271-4986
FEATURES             Location/Qualifiers
     source          1..5210
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 25.06 cM"
     gene            1..5210
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /note="transmembrane protein 260"
                     /db_xref="GeneID:218989"
                     /db_xref="MGI:MGI:2443219"
     exon            1..252
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            253..284
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            285..436
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            437..614
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            615..728
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            729..908
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            909..949
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            950..1033
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1034..1148
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1149..1318
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1319..1490
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1491..1639
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1640..1816
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1817..1870
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1871..1961
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1962..5189
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2962..2967
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2986
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /note="major polyA site"
     regulatory      3087..3092
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3113
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
     regulatory      3390..3395
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      3416
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
     regulatory      3610..3615
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3631
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
     regulatory      5159..5164
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      5179
                     /gene="Tmem260"
                     /gene_synonym="5930435P15; 6720456H20Rik"
ORIGIN      
        1 cctgctagac cggaagccgg cgcgggctgt gcgcgcctct cggccaggga aggtccgcac
       61 cgctgcgagg ggtcacggtc cgcgagctgc gcgcgtccgg gcccatgggt ctccatggcg
      121 acggcgggag cccggcagcc ggagcggggc cgtggcgctc cggggccctc cgcggcagcg
      181 tggccgtgtt cgcctccgtg gctgccgtgt tcaccctcac gctgccccgc tcgctgcctg
      241 ggggagactc gggggaactg atcacagccg cacatgagct tggagtcgcc catcccccgg
      301 gctatccgtt gttcacactg ttggctagcc tgacaatcac cctctttcca tttggctccg
      361 tcgcctaccg cgtcaatctc ctctgtggct tattcggggc ggtagccgcc tcgctcctct
      421 tctacaccgt tttcaggctt tctggctcac atgctggagg gattcttgct gcgggggtgt
      481 tttcattttc tcgcctaaca tggcagtggt ccattgcagc cgaggttttt agcttaaaca
      541 atctgttcgt ggggctgctc atggcgctta ctgtgcgttt tgaggaggca acagccgcaa
      601 aggagagatc aaagatagcg gccattggtg ctttctcgtg tggcctcagc ttgtgtaatc
      661 agcacacgat agtcctctat atattatgca taataccctg gattcttttc cgacttctca
      721 aagagaagga actcaccctc agcttgctgc tgaggctgac tctggccttc tctgctggcc
      781 tgctgcccta tgtctacctg cctgtctcgt cctacctcag tcgcgcccgc tggacctggg
      841 gagaccagac gacactgcga gggtttctga cacatttctt cagggaagaa tatggaacgt
      901 tcagcctggc caagtctgaa gtgggatcga gcgtgtctac agtactgctt tcacaggtaa
      961 taaatatgaa gaccgaactt tcattcaata tccaagctct tgcagtttgg gcaaatatat
     1021 gtttagctag aaaggacagg cggaagtcat cagtagtatg gcttttcact ggaatgcttt
     1081 gcctgtattc attattcttt gcttggagag caaatttaga tatttcaaaa ccacttttca
     1141 tgggtgtggt ggaacgattc tggctgcaga gcaatgcggt ggtggccgtt ctcgctggcc
     1201 tcggtttggc cacgcttgtg tctgagacta accgagtgct ccactgtact gggattcgga
     1261 acctggagtg gctgtcagca gccctttttg ttgcttatca agtatactca aattacagca
     1321 tttgtgacca aagaaccaat aacgtgattg atcagtttgc acgaaatctt ctggactcca
     1381 tgcctcagga tgccatcatc ctactcagag gagacctgcc tggaaacgct ctccgttact
     1441 tgcattactg cgagggcttg agaccagatg tttcactggt ggatcaagaa atgatgacct
     1501 atgagtggta cttacccaag atggcgaggc atttgccagg agtgcacttt cctggggacc
     1561 ggtggaaccc tgtggaagga gtgttaccca gtgggatggt cacattcaac ctctatcact
     1621 ttcttgaaat gaataagcaa aaagaaacat ttgtttgcat aggaattcat gaaggcgacc
     1681 caacctggaa aaaggactat tcactttggc catggggatc ttgtgacaaa ttggtgcctt
     1741 caaagattgt attcaaccca gaggagtgga ttgaacgcac aagagccatc tataactgga
     1801 ctgaggccta tgaaagattt ggtccatctt cttgggaatc ggtggccaat gaggagatgt
     1861 ggcaagcaag aatgaagact ccattcttca tcttcagtct ggcagagtct gctgcagttc
     1921 ctgcagatgt gaaagcacaa ctctacacgc atgcatataa actttataag gagattgtgt
     1981 acttgcaaga ggaacaccca gtgaattggc acaagaacta tgccattgcc tgtgagcgca
     2041 tgttacgcct tccagggacc ggcatagacc ctgaagtcct gctgtctgaa gccatcagac
     2101 attttcatct ctacactcag aaagcacaaa atgatccaca gcgagcagac attatagctg
     2161 ctctcaagca tctaagaaga gaactgcaaa gtctaagaaa tataaaaaag gtctgagcca
     2221 gcaaagtgtg gtagccctgc ttaccgctct gctcccaaag tttctgaagt ccaagaattt
     2281 ttccttcaag tacagaagct gcatcaaaaa agtagaaatc tcatttatct cctggatatc
     2341 agtgtcacgt gcagcagaaa cgagctaatg gctgaaatgc aggccttatg caaaatcctg
     2401 tttatctcac gttgccaaat tagcatttcc atgagaagca tgcaaaaaca tctgtagtcc
     2461 tcagagcaac tgactgtagg ttctagctga gaaggaactg tctccacaga cattggagac
     2521 atgtctccat gcttattggg atccaagggt aaattcttaa gaaatattgc agaccaaagt
     2581 cattttctat ttcctgcaag tgagatagtt tctgaaaaac aattcttgtt atatacctca
     2641 ttacaattcc tttttccctt gttaactata actattttag tcttaagttt tatactatat
     2701 accaagtacc tggtttttta tttttaactt tgagttttat catcttagtt ctgcagccca
     2761 tgaaaaggaa agctaacttc aagttctctc atttctgttg cagaaatggg caaattaaaa
     2821 gggcatttta tatgtcctta attaatttca tatttatgtt gtccttctct ttggattcac
     2881 agatctagac ctagtaatta ggaagtagct gcccagatga acaaaggggc atgggcgaga
     2941 gtgggggtga ggacgtcgtt caataaattc atttctgttt caggcatctt ttatacatat
     3001 tactaaagag aacgtagcaa gaaatgcaga taataatagc tctttatttt attatgacag
     3061 ttaattaata gcaacctgtt ttaatgaata aagtcactca gagtccttca gcacttccta
     3121 agtagaggcc agaatctgta gggattcttt gcccctgatt gtatagctcc tagactccga
     3181 gcactatata ggcccctgta tagaaatgct cactaatgaa gagggagggc tagaagcttg
     3241 tctgcattca aagatcactg gtgagtcatt cagcaagaaa aggcccctta ccaggaatag
     3301 tcacagttcc gtggcattgt actagcaaaa gggtctgatc aaaggtctcc cgtggagctt
     3361 gcatggctcc ctttcatacc acgaccataa ttaaaaccac taattctctt ttaaaatgct
     3421 gcaggatgcc atgtaggcat ctgtccggag tgtcctttgt gatgtcataa gcggttaagg
     3481 accagtgccg agggcttttg agtgaaatgc cagtcatgat ggtgcttcaa gtcaagggtg
     3541 cctctaaaag cttgacaggg ccttgactgc acaattcgag ctgaatttgc cccttgtcag
     3601 ctgccagtaa ataaatctca aaggggggaa agctgaagtt tcattacctg atccgtgggg
     3661 ctttgttggt tttggcatca cacaggggaa gctcttgctc ctccattctc tggatttgaa
     3721 gatgtccatt ggagcctgca gtgcctggac agggttcaga gcggaacctt ttgaagagtg
     3781 tcaatagttg taacagttca gctgttagga agacaaatac atggaggggc tcattaatcc
     3841 gcttttggct ctcggtgcct tttgcccttt tatcacagcc ttattaggct cctgctcatc
     3901 ttgaaccaga aaaaaccgaa ttgaagttgt tgagtactaa ttggcaaaga cttttaatca
     3961 tgggccaaga actttcactg acttgaaagt aacttctccg cagggaagag ccagaaacct
     4021 ggttcacctt aaaacaaaaa cctgttggag ctcagggcgg tgtgaggctg ggaggaagca
     4081 ctgggaaatt gtctacggtt ccaaagaaat gataggaggt tatatccgcc tttccctttc
     4141 ctgggagaga agggcagtaa catccaagca tttcttcaga gagcctttat tggttcagaa
     4201 aaaccaattc ttgagtgtgt ttgtttccga acatcctgta tgtgtgatta ttcatctgag
     4261 actctatgta tacacacggt atttatttaa aaggaacagt gtctgtctag gctcacaagg
     4321 agcagccgag gcctctttga gaacaccttt taaatgtgta tcagcatgta gtaggcatgt
     4381 ccgctgccga gtgtgctttg cacatgagtc gtattagcac atggcatata gtttatctga
     4441 catttgtata gcagtgacat tagacctctt tgacaaagca ataatgtata tagcatgaga
     4501 cagataaaat cacaactatt taaactcctt aaaaccatcg gtaaatgaaa aaatttccaa
     4561 tggaagtatt atttaaggat ggttagcctt ggctaacctt catgcccagt cagcaacttg
     4621 gaaaagtctt ttcctttctc ctgtgtgaag caaaagttgc ttttcctaac ttgctattgc
     4681 ttttccttgg ctggagcata acagcataaa atcagataaa gggctccctt cagtccagcc
     4741 cccgaggctg aggagggcgt gaggagatgg cttcttatac aggatttggc cagcatcctc
     4801 ctccgtgtcc ctggtgtgcc atgggttggc agatctacag gaaccccaca aagccaactt
     4861 ctgcctggag gttagcccga ggaggaagta ggagccggca gagctgtctg tctctccaca
     4921 cactccagtg ccctgctgcc tggaccctaa ggccagccca ctccagaggg cacaggacaa
     4981 gggcattgtg gctgccatca tcactagcaa agcactgagc acgtcccact tcttaccctt
     5041 ctctggttcc tgctgtggga gcatgcgcag ttcctagagc ttagtccctc ttgtttttaa
     5101 aaagaatgtt ttaaaagtta catgttttgt tctgttactc agattgtagc cagaataaaa
     5161 gaaaattaat tataatgtat tcaaaaatga aaaaaaaaaa aaaaaaaaaa
//
