LOCUS       NM_029384               1051 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus transmembrane protein 238 (Tmem238), mRNA.
ACCESSION   NM_029384 XM_973716 XM_976155
VERSION     NM_029384.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1051)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK008900.1 and AC162034.6.
            
            On or before Feb 2, 2007 this sequence version replaced
            XM_973716.1, XM_976155.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK008900.1, BC132101.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                AK008900.1         2-11
            11-471              AC162034.6         133585-134045       c
            472-1051            AK008900.1         476-1055
FEATURES             Location/Qualifiers
     source          1..1051
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 2.77 cM"
     gene            1..1051
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
                     /note="transmembrane protein 238"
                     /db_xref="GeneID:664968"
                     /db_xref="MGI:MGI:1922935"
     exon            1..556
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             19..549
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
                     /codon_start=1
                     /product="transmembrane protein 238"
                     /protein_id="NP_083660.1"
                     /db_xref="CCDS:CCDS51977.1"
                     /db_xref="GeneID:664968"
                     /db_xref="MGI:MGI:1922935"
                     /translation="MAAASPVCGSQASAVGASSPPAPAPAPAAGLGRCRMALLLAVAL
                     DVAGMAALLTGVFAQLQVRGRDFGDLLIYSGALLVFLSLLGWILWYTGNIEISRQELE
                     RDYGLRPSAIARLARKLSRRWSAPATASPRTTAGLRSARRANRAPQPSSSGSRRVRLQ
                     LATLEAGSVAAGTGSE"
     exon            557..1051
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      644..649
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
                     /note="hexamer: GATAAA"
     polyA_site      664
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
                     /note="major polyA site"
     regulatory      1028..1033
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      1048
                     /gene="Tmem238"
                     /gene_synonym="2210411K11Rik"
ORIGIN      
        1 ggcgggccac cgagggccat ggcggcagcg tcaccggtgt gcggctcgca ggcgtccgcg
       61 gtcggcgcct cgtccccacc cgcgcccgca ccggctccag cggccggctt gggccgctgc
      121 cgcatggcgc tgctgctggc cgtggccttg gacgtggcgg gcatggcggc gctgctgacc
      181 ggcgtgttcg cgcagctgca ggtgcgcggc cgcgacttcg gggacctgct catctactct
      241 ggggcgctgc tggtgttctt gagcctgctg ggctggattc tctggtacac cggcaacatc
      301 gagatctcgc gccaggagct ggagcgtgac tacggcctac gaccctcggc gattgcccgc
      361 ctggcgcgca agctgtcccg tcgctggtcg gcgcccgcca ccgccagtcc ccggaccaca
      421 gccggtctcc gctcagcacg cagagcgaac cgcgcgcccc agccctcctc ctccggctcc
      481 cgccgcgtgc gcctgcagct cgccacgctt gaggcggggt ccgtggcggc aggcacgggc
      541 agcgagtgag ccccagacca cctcatcctc cggacctgac tgagacatgc agcttccctg
      601 tgcatcacta ggccaccagg atatccacct gtcacctcac ttggataaat gtttctgttt
      661 tggagcagtg cttgcctgtc tggttaaggg gactgaaatg ccaggccaag acaccgttga
      721 tcttggggtc cctagggatg taggatttca actgcttact agcccttcac tagggacacc
      781 tgggaggcga gaagaaggat ctccagtgca tgcagagcca cccacccagc caggcttccc
      841 tagggaagtt taggtcttcc aagaacacac acaggggcac actgaacttg caagatattt
      901 actgcgggtt ggtcctgata tagaagatgg cattgatgca ggatgcctgc aagacgagga
      961 ggagagagag agagctaact gaactgaatg tgggcagact gaatctgagt gtagaccaca
     1021 cactttcaag aaaaggtttg gcagtggaga c
//
