LOCUS       NM_001081310            3658 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus transmembrane protein 236 (Tmem236), mRNA.
ACCESSION   NM_001081310 XM_889841
VERSION     NM_001081310.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Skarnes,W.C., Rosen,B., West,A.P., Koutsourakis,M., Bushell,W.,
            Iyer,V., Mujica,A.O., Thomas,M., Harrow,J., Cox,T., Jackson,D.,
            Severin,J., Biggs,P., Fu,J., Nefedov,M., de Jong,P.J., Stewart,A.F.
            and Bradley,A.
  TITLE     A conditional knockout resource for the genome-wide study of mouse
            gene function
  JOURNAL   Nature 474 (7351), 337-342 (2011)
   PUBMED   21677750
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BY733764.1,
            AL845434.11 and AK008065.1.
            
            On May 23, 2007 this sequence version replaced NM_001081310.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript was available
            for the full length of the gene. The extent of this transcript is
            supported by transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK144489.1, BY733764.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849378
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-612               BY733764.1         2-613
            613-1113            AL845434.11        111093-111593
            1114-3206           AK008065.1         1-2093
            3207-3658           AL845434.11        113687-114138
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 10.42 cM"
     gene            1..3658
                     /gene="Tmem236"
                     /gene_synonym="2010003H20Rik; Fam23a; Gm613"
                     /note="transmembrane protein 236"
                     /db_xref="GeneID:625286"
                     /db_xref="MGI:MGI:1919309"
     exon            1..317
                     /gene="Tmem236"
                     /gene_synonym="2010003H20Rik; Fam23a; Gm613"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..1101
                     /gene="Tmem236"
                     /gene_synonym="2010003H20Rik; Fam23a; Gm613"
                     /note="family with sequence similarity 23, member A"
                     /codon_start=1
                     /product="transmembrane protein 236"
                     /protein_id="NP_001074779.1"
                     /db_xref="CCDS:CCDS38049.1"
                     /db_xref="GeneID:625286"
                     /db_xref="MGI:MGI:1919309"
                     /translation="MASGKIIKLVVFELLEFAAFSIPTLVIMEQFATANQRTKSERTH
                     YWLIVSCSIAYVAVVSLLIWVPVKVVLYKKRHLYKKIIGWRPVLVMCVVLTTLPSFSF
                     SIAVTEVQKNINGSANSLPESLPDLPVSLVLLSLIVVDIIEKLRQYPLRGSQKGYEDN
                     DICITSLQQIKTVTEQVVQSDGNPASAQAAKPTAMSQPRNHVAVLAGPLEPSFQSRIL
                     RTMSQRDVRAELFLRSFLMWADTVEMLRVAGHQAVYKSAWLYPVYIFSFISLLRMVFT
                     PKNPLLNSLGILMQDLPFVFLRLSLILALGTITPVLGLCKNVLVTISYIYFNYVTKLR
                     PFSAFETSPF"
     exon            318..390
                     /gene="Tmem236"
                     /gene_synonym="2010003H20Rik; Fam23a; Gm613"
                     /inference="alignment:Splign:2.1.0"
     exon            391..532
                     /gene="Tmem236"
                     /gene_synonym="2010003H20Rik; Fam23a; Gm613"
                     /inference="alignment:Splign:2.1.0"
     exon            533..3658
                     /gene="Tmem236"
                     /gene_synonym="2010003H20Rik; Fam23a; Gm613"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgtttatat gctgctcact gtgaacaggg gagtgccagg tcctcagctc cctactgctt
       61 ctcaggatgg cttctggcaa aataatcaag ctggtggttt ttgagcttct tgagtttgct
      121 gccttctcca ttcctaccct tgtgataatg gaacagtttg cgactgccaa tcagcgaaca
      181 aagtctgaaa ggactcacta ttggctcatt gtttcctgtt ccatcgccta tgtggctgta
      241 gtgagtctct tgatttgggt tccggtaaaa gttgtcctat acaagaaacg gcatctttac
      301 aagaaaatta taggatggcg acctgttctg gtgatgtgtg ttgtgctcac cactctcccc
      361 agcttcagct tctccatagc agtcaccgag gttcaaaaga atatcaatgg ctcagctaat
      421 tcgttgcctg aatccttacc tgatctgcca gtatctctgg ttctgttgtc cctgattgtg
      481 gttgacatta ttgaaaaact caggcaatat cctctaagag gcagtcaaaa gggttatgaa
      541 gacaatgaca tctgtataac ctcgttgcaa cagataaaaa ccgtgacaga acaggtagtt
      601 cagagtgacg gaaatcctgc atctgcccag gcggccaagc ccactgcgat gtcccagccc
      661 cggaaccatg tggcagtgct tgccgggccc ctggagccct cctttcagtc taggatcctt
      721 aggacgatgt ctcaaagaga tgttcgggcg gagctgttcc tgcgaagctt cctcatgtgg
      781 gccgacacgg tggaaatgct gcgtgtggct gggcaccagg cggtgtacaa gtcagcctgg
      841 ctgtacccgg tctacatatt cagttttatc tctctcctga gaatggtctt cactcctaag
      901 aatcctctcc ttaattccct ggggatcttg atgcaagatt tgccctttgt ttttcttaga
      961 ctcagtttaa tccttgccct gggaacgatc acgccagtac tgggcctttg taaaaatgtc
     1021 ctagtgacta tatcctatat ctacttcaat tatgtaacca aactcaggcc tttctctgcc
     1081 tttgaaacct ctccatttta aacagcaaat gtcaagatac taagtcctcc tgattatgca
     1141 tgtgaaatgt gtatttgtaa agtttttcta ggtataaacg tctgtggtat ataaaattaa
     1201 ccatttccta cccatatcat agctttaata cacacacaca cacacacaca cacacacaca
     1261 cacacacaca cacacacaca cgtatataat ggtgctacat ttaaacaaaa ctaactttag
     1321 acatgcatat tcatttcact ttcagttaaa acttactcct taataagcct tttaaaaaat
     1381 gacaggagtc atgacatcac ttaagaatga gatttttatc ttgagtccat tgaagaacat
     1441 tttgcggctt aattattcga aattagtttt agaaaataac ttgaggttat tgaatatatt
     1501 ttagagtttg tctgaaaact ggagttgtag ggtcttgttc aaacttaaaa ttatactctg
     1561 tgtgtgtgtg taaatgagtg ttttcagcag tgaggattga actcggggca caccatctta
     1621 gtagtagcac aaacctaaca atgagctaca tcccttagaa atacatttct tactctgttg
     1681 cagttaccgc tactaagtca ttagctacat agaaaactag ggtcttcagc acacatcagt
     1741 ttggcaaagc ttccttacag cttcttgggc tggtgcagct ggcagtgcgt cagtgttgag
     1801 gataatggag ccaaggtaca ttgtgattcc tagataaagc tttgtaatgg acaccataaa
     1861 caatgtgtaa gagtgtaaca taaacagagt ttgatgccat cataaaaaaa aaatcaagta
     1921 gtttgcactt agtatagatg ccaaaggttt cttacgttgt actaggtcct gagtatcttc
     1981 atgttacaat gatcatgcac acagtcatga actcttcatg tgctctgatg gcatagatac
     2041 tcatatccaa gcagagattc tttgtttata agagaaactt gtaagaagtt tatctctgca
     2101 gagtaatgtg gaagcaaata gcttatgaac agttagtaac tctgagtgtt cccggcctct
     2161 gtcctgtgcc ctcacccact ctgtgtgtat ctggcctcca tctttcgtcc ctcccccagt
     2221 ctcctttccc gttatgtctc atagttgttc tcacactgta gagacctact cgtaattgtt
     2281 aagccttgct taccagcttg gtgatttggg gctaggtcct tgaatgctgt gacccccact
     2341 ggtacaaaaa gatgaacaca cataagtact tatttagtag tgtcagggga ttgtaggatt
     2401 ggagtgctct caatgcagtt tcgaacaaat aatagcccct taaatgctgg gcacttaatg
     2461 ggaccatccc acatccctgc ccagcctttg agaataatag ttcatgcctg aaatttgtga
     2521 gatgtagcat gtaagatctc aaggttaccc cagactacag gtgtttatca atcactcttg
     2581 ttatcaatag caaattgagt tgtaaaatat ttagatgaaa gtgaatatgg aaagccattc
     2641 tttcacttga atagaacttc tgtaagctct caaagaattc agaccacagc actctatttc
     2701 tttcttttat tttaattttg gatgagggtc ttactatgta gcccaggctg ctctgaactc
     2761 actatgtagc ccaggtaagt ctgaacttga actcaccacc ctcctgcttc cacctcccag
     2821 atgctggaac tacagggatg tgcattgctg aggattaaaa acaccttcac cagcccacca
     2881 atgccacata agcacctgcc tcagagccat aaccctagat ggcagtttgt gtgtctgaaa
     2941 gcttttgatt atatatctac ttttcttgtt gtctcactaa cttgacaatc ccataagagg
     3001 aaacctgaga gtgtcttgct tagctacacc tctgtctcta cctgccaatc ctaggttagg
     3061 tactcacaat gtttctaaca ttaaatacat atcttctaaa attaagaaat tccttacaac
     3121 caagcaccca atttacaata ctcataaatg caaggcttgt ttacataaat gtatatattt
     3181 ttattttgca attttgagcg aatgcactca gtaaacttta aagtattaca tgaggttagt
     3241 ctgcattttg tgtctgacag tcaaacatgg atatgcctga tatctgggga tgttagcaat
     3301 gcttgaaaca ggtaatgaag gcatgtataa caaacagatc atataaggca gggaaagctt
     3361 tgagtttctg gcctaactga atgcacagat gtggataaag ctcaagcctg tgggacttaa
     3421 gagacattac aagaacttac gtaaatgtag catcgagagt tttacattat gtaattagaa
     3481 cctatatttt actaaaattg tactgtaatt cttataagct atttattatt gttggcatta
     3541 atgtttttgt cctaatataa agcttaattt ctgctgtaaa gtatgaatac agaaactgca
     3601 cagatctgta atagactatg tagtatttaa ctctgaataa aatctgaagc cacatgat
//
