LOCUS       NM_001085535            1820 bp    mRNA    linear   ROD 04-FEB-2024
DEFINITION  Mus musculus transmembrane protein 235 (Tmem235), mRNA.
ACCESSION   NM_001085535 XM_621267 XM_911377
VERSION     NM_001085535.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Maher,G.J., Hilton,E.N., Urquhart,J.E., Davidson,A.E.,
            Spencer,H.L., Black,G.C. and Manson,F.D.
  TITLE     The cataract-associated protein TMEM114, and TMEM235, are
            glycosylated transmembrane proteins that are distinct from claudin
            family members
  JOURNAL   FEBS Lett 585 (14), 2187-2192 (2011)
   PUBMED   21689651
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Mineta,K., Yamamoto,Y., Yamazaki,Y., Tanaka,H., Tada,Y., Saito,K.,
            Tamura,A., Igarashi,M., Endo,T., Takeuchi,K. and Tsukita,S.
  TITLE     Predicted expansion of the claudin multigene family
  JOURNAL   FEBS Lett 585 (4), 606-612 (2011)
   PUBMED   21276448
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL591433.6.
            
            On or before Jul 25, 2007 this sequence version replaced
            XM_911377.2, XM_621267.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN00849384,
                              SAMN01164136 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-175               AL591433.6         37095-37269
            176-256             AL591433.6         38571-38651
            257-394             AL591433.6         39218-39355
            395-1820            AL591433.6         40461-41886
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 82.96 cM"
     gene            1..1820
                     /gene="Tmem235"
                     /gene_synonym="Cldn27; Gm12581"
                     /note="transmembrane protein 235"
                     /db_xref="GeneID:546519"
                     /db_xref="MGI:MGI:3651706"
     CDS             1..636
                     /gene="Tmem235"
                     /gene_synonym="Cldn27; Gm12581"
                     /note="transmembrane protein ENSP00000364084 homolog;
                     claudin-27"
                     /codon_start=1
                     /product="transmembrane protein 235 precursor"
                     /protein_id="NP_001079004.1"
                     /db_xref="CCDS:CCDS36383.1"
                     /db_xref="GeneID:546519"
                     /db_xref="MGI:MGI:3651706"
                     /translation="MALLATLLLSAALGALLSFALLAAAVASDYWYILEVADAGGLGG
                     VQLFSHSGLWRTCEGQNSCVPLIDPFASAGLEVSPSVQHLLSLHRTVMVVLPLSLVLI
                     VCGWVCGLLSSLSQSVPLLLATGCYFLLGGALTLAGLSIYISYSHLAFVEAARTYGVT
                     HVQNVHISFGWSLALAWASCASEVLSGALLLAAARLLSLSQRPGVPHSVIL"
     exon            1..175
                     /gene="Tmem235"
                     /gene_synonym="Cldn27; Gm12581"
                     /inference="alignment:Splign:2.1.0"
     exon            176..256
                     /gene="Tmem235"
                     /gene_synonym="Cldn27; Gm12581"
                     /inference="alignment:Splign:2.1.0"
     exon            257..394
                     /gene="Tmem235"
                     /gene_synonym="Cldn27; Gm12581"
                     /inference="alignment:Splign:2.1.0"
     exon            395..1820
                     /gene="Tmem235"
                     /gene_synonym="Cldn27; Gm12581"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggccctgc tagccacctt gctcctgagc gcagccctgg gcgccttact cagcttcgcg
       61 ctgctggcag cggctgtcgc cagcgactac tggtacatcc tggaggtggc ggacgctggc
      121 ggcctcggtg gcgtgcagct cttctcgcat tccgggctct ggcgcacctg tgaagggcag
      181 aacagctgcg tgcccctgat tgacccattt gccagtgccg gcctggaagt ttctccctcc
      241 gtacagcacc tgctctccct gcatcgcaca gtcatggtag tcttgcctct gagcctcgtc
      301 ctcatcgtat gtggttgggt ctgcggcttg ctcagctccc tatcccagag tgtccctctg
      361 ctgctggcca ctggctgcta cttcttgcta gggggtgccc tgaccctggc agggctcagc
      421 atctacatca gctactcaca cctggcattc gtggaggcgg cccgcacgta cggcgtgacg
      481 cacgtgcaga acgtgcacat cagcttcggc tggtcactgg ccctggcctg ggcctcctgc
      541 gcctcggagg tgctcagcgg ggccctcctg ctcgcagctg cccggctcct cagcctgagc
      601 cagcgcccag gagtgcccca ctctgtgatc ctctgagtcc cagtgtaaca gggtgctggg
      661 gagaaggaag ccccagacac ctttgacatt tgtcggaatc ctggctggga agggccttgg
      721 agatgggggg ggggcgtggg gagggcgtgg ggggggggag tgctccattc tactccattt
      781 gaacatgaga agggcaggtg ggtagccggt gcctcgaatc atgagctctt tttgggacag
      841 tctggtgggg tgcctcaggg ttctgtgtgt ccagaaggtg ttcttgctct gggggatgta
      901 gcccactcca acctagggag ctgagacagt cctcccctgt gctaggtgcc tgctgagtgt
      961 tccgcttcct ctccatcccc cacaagctag gcaatagtaa ccactcaccg aatgccacag
     1021 agtgggagac tgaggccaga aggcccaaga acagatggca ggtctgggtg tcactgctct
     1081 ttggcgggac ccatgggttc agttttgttc cctttcccaa ggggaagttg gtggggagga
     1141 agcttggggc tggtgagagg cacatcttcc aggcaaagtg gacctttggg tctcagtcct
     1201 catccccagc aggctgctgc ccatgctggc ctggaacttc ctctttatag cagcaaccag
     1261 gggaatgtct gaggctggcc ccattaacag tgaattggag ccatgcctgg ccagccccct
     1321 gggttgtctg gctagaggaa ctcctcagag ggacgcagaa gcctggcctg gagacttggc
     1381 tgcagatgtg gatgggtcag ctcacaggcc caggcctgca gccctctccc tgcctgggac
     1441 agcacagatg agaactggat cagctctggc cacatacaag gggacagacc tgtgtttatg
     1501 tatttggaca ataggcagct gtaagttagg ggctgtacag taccccaaaa gccccaaaca
     1561 gccctgattc tggtgtgggc tcttcctgag tttgggacat atactaggga aggtagtatc
     1621 tctcaaggtt tggtcccagc agtgtcccca agctacttag attgcttcta aggatctggg
     1681 gagcttctga ggagcagggt tagtgggacc cactgagggc aaaggactgg agctgatgga
     1741 gaccctgccc tccagtttgt gttcagacct ttgccattcc atgtaagagc acttccaggt
     1801 gtctgaataa atcagctgtg
//
