LOCUS       NM_144525               2832 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus transmembrane protein 214 (Tmem214), mRNA.
ACCESSION   NM_144525
VERSION     NM_144525.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC109606.11 and AK034883.1.
            
            On Oct 13, 2017 this sequence version replaced NM_144525.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK143078.1, BC029150.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-68                AC109606.11        93397-93464
            69-2830             AK034883.1         3-2764
            2831-2832           AC109606.11        101286-101287
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 16.9 cM"
     gene            1..2832
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /note="transmembrane protein 214"
                     /db_xref="GeneID:68796"
                     /db_xref="MGI:MGI:1916046"
     exon            1..240
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            241..440
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            441..591
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            592..726
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            727..809
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            810..915
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            916..997
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1099
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1100..1241
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1242..1333
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1334..1382
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1383..1496
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1497..1614
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1615..1711
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1712..1880
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1881..2026
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2027..2832
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2808..2813
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2826
                     /gene="Tmem214"
                     /gene_synonym="1110039B18Rik; 4921530J21Rik"
                     /note="major polyA site"
ORIGIN      
        1 agggtgcctt gcggcggcgg aggcagcaga cgtggcaccg cgcggaggtt gtccggggcc
       61 gaaagccggg aggtggtgga gctgaagtca tggcggccag atcagcgggt agcggtggct
      121 gggaggtggt gaagaggggc cggcgacctg gagcaagcag cggtgggcga ggcggcggcg
      181 gtggcagtga ccgccgggcg ctcggggagg caaatggagt gttgaaatac gacctgagct
      241 caccaatcca gactacaagc actctttatg agcgtggctt tgagaaaatc atgaaacggc
      301 agaataaaga gcaagttcca ccccctgctg cagagtctaa gaaaccgata aacaagaagc
      361 aaccaaagaa ggtgacagct gttcctagcc aaaaccagaa acagggccca ttccgacgcc
      421 tggaggacgc actgaaagcg ctggatgtgg cagctctgca gaaggaactg gacaagagcc
      481 agagcgtgtt cactgggaac ccctccgtgt ggctgaagga cctggccagc tatctcaact
      541 acaagctcca gactccacgg atggagccca ctctgagcca gtatccacat gattatccct
      601 acagccttgt gagccgagag ctacgtggga tcatccgggg gctcctgacc aaagctgcag
      661 ggtctgtgga gctctttttt gaccactgtc tattcaccat gctgcaagag ctggataaaa
      721 caccagggga gtcgctacat gggtaccgca tctgtattca agccgttctg caagacaagc
      781 ctaagattgt cacctcaaac ctggacaagt tcctagagct tctgcggtcc caccagagcc
      841 gaccagcaaa gtgcctgacc atcatgtggg ccctggggca agcgggtttc accaacctca
      901 ctgagggact gaaagtgtgg ctggggatca tgctgcctgt gctgggcatc aaggctctgt
      961 ctccctttgc catcgcatac ctggaccggc tgctcctgat gcatcccaac ctcaccaaag
     1021 gctttggcat gattggcccc aaggacttct tcccccttct ggactttgcc tatatgccca
     1081 acaattccct gagccccagc ctgcaggagc agctgtgcca gctcttcccc cgattgaagg
     1141 tgctggcatt tggggccaag ccggaatctt ccctgcacac ctacttcccg tcattcctgt
     1201 ccagagccac ccctagctgt cctgctgcca tgaagaaaga gctcctggcc agcctgaccc
     1261 agtgcctgac tgtggacccc cttagcacta gtgtctggag acagctgtac cccaagcatc
     1321 tgtcacagtc cagcctgctg ctggagcacc tactcaagtc ctgggagcac atccccaaga
     1381 aggcacggaa atctttacaa gaaaccatcc agtccttgaa ggttaccaac caggagcttc
     1441 tgaagaaggg cagtggtggc agtgagcatg ttctcacctg tgacacagcc tgcaagggct
     1501 tgttgcaacg ggcacggggt cctcggccac cctgggcccg gctattcctg ctgcttctgg
     1561 tctttgcagt aggattccta tgtcatgact tgcggtcaaa cagctctttg caggcctccc
     1621 tcactggccg gctgcttcga tcctccggtc tcttgcctgt tggccagcaa gtgtgtgcga
     1681 gactctcctc ctacagcctg cagagctaca actggctgca ggagaccttg ccagcctgtg
     1741 gctcccacct gcttgctgtg gtacagccca gtctgcagct ggcctggaca cacatctatg
     1801 ccatattcag cttcctttct gcccactgtg cctcctacct tgcctgcttc agtgatagcc
     1861 tggctggctt ctttcagagg gtccagctcc ctgaggccct gcagcagctc ttccacgcct
     1921 tgaaggaact gctgctgctc ttctgccata gcgtgctgct gcccacatgg cacttgctgc
     1981 ttgcagccct ggcccaagtc caggagcatt gccatgaggc ctgcagaggg gacgtgacct
     2041 gggactgcat taagacacag ttgagcagag ctgcccaatg gacctggctc tgcctgcagg
     2101 atgtcacagt ggctttcttg gactgggcac tcaccatgat atcccagcaa tagaccctgc
     2161 ctgcctggcc actggttctg tggtgggcta cctatcggag tagaggaggc agccctcttc
     2221 acttggtgcc tgacttctgc ctcctaggca agagaccagg tatctgcctc acttctccat
     2281 cttcaggaga ctggacagga gcatcccagc ctcctgtcca caggcctgtg aggtctctca
     2341 ggcccagttg cacagcatcc aagcctcttc taggctggga gcctctccac ttctccctgt
     2401 ggtcctccca tcatcactca agcagccaca gtccacctcc aaagaagaga agtaactgcc
     2461 tttccttgtc cctggtcatg acttaaatca cagcagagaa aaggaaagca cttcaggagg
     2521 gccagcacca cagtgggcag cagcagtgtc acttctacca gcagcctagg tgactgtcag
     2581 tggacatgca ggccatgtgg acagcctgtt acctcaaaac acccagaaca agcacgcctt
     2641 cccaggaggc cacttgtccc ctactctgtc agagccttgg cttctcaact ccattctgct
     2701 cgctgctggg gctcctctct atcagcttgg ttcacagcac agcccacctg aagagcagcg
     2761 ccctctgtca gcctgctgaa gggggtcagc atatggctcc tggggagaat aaagacacag
     2821 actggatttc ta
//
