LOCUS       NM_001206661            3260 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus transmembrane protein 200C (Tmem200c), mRNA.
ACCESSION   NM_001206661 XM_001480132 XM_003085141 XM_003086079 XM_887086
VERSION     NM_001206661.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3260)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT573017.5.
            
            On Jun 15, 2021 this sequence version replaced NM_001206661.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.1850429.1,
                                           SRR7974084.22873.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-445               CT573017.5         77100-77544
            446-3260            CT573017.5         80335-83149
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 39.36 cM"
     gene            1..3260
                     /gene="Tmem200c"
                     /gene_synonym="EG622645; Gm6338"
                     /note="transmembrane protein 200C"
                     /db_xref="GeneID:622645"
                     /db_xref="MGI:MGI:3646281"
     exon            1..445
                     /gene="Tmem200c"
                     /gene_synonym="EG622645; Gm6338"
                     /inference="alignment:Splign:2.1.0"
     exon            446..3260
                     /gene="Tmem200c"
                     /gene_synonym="EG622645; Gm6338"
                     /inference="alignment:Splign:2.1.0"
     CDS             546..2459
                     /gene="Tmem200c"
                     /gene_synonym="EG622645; Gm6338"
                     /codon_start=1
                     /product="transmembrane protein 200C"
                     /protein_id="NP_001193590.1"
                     /db_xref="CCDS:CCDS57107.1"
                     /db_xref="GeneID:622645"
                     /db_xref="MGI:MGI:3646281"
                     /translation="MIATGGLLRISARKQDPLRPPSQVPKRKRKAKKRRKNDVVVVKG
                     KLKLCSISGLIALCGILVLLVGIAMAVVGYWPKANAANRGGSKQLLPVGSSHRIGAIS
                     NSSNGNKNPAKSHSGTPGGANSSSVGGPWSPPPARSAATSSSSSSSSSSSSSTSVGFF
                     FRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKIINLRDLYSTVIDV
                     HSLRAKDLAAAAAAAAAAAASSSAAAPGSASHGAAPLNGFLSYVQSRGLELKPGSCAG
                     SADAFGAAAMLARGSWPHPTGLDGGSGETQEAGSPPDLASSPRCPREPPSLTEAVYSI
                     YRERSSRAGHRRTTVAAVAAATATVTAAASGGSSPAPCSPTGSWGRQSTTSSLVGSSL
                     SAFALLPLQGDRDRDGDSEGASCSWHRPPGERGSRDLPRGELDLSLTDLRGAEGGARW
                     ASCEPGEPEGAKTARTARGQGGRLPRTRRYAAWRRRSTSGLPDYRAPPSPEPPPSSSA
                     ENLDSGPSATAATPSLPLRPEEDSPRVRRDSHSSQSDDQSSSNKGYTPLREADTSVES
                     VVDVVAKKRLDCEDVTDPSTEHSSPEGPSPGPTRAEPLSVQRQFTNKEKLFLISRSHT
                     PGVEDPELKKSSN"
ORIGIN      
        1 gtgtcatggc tccggtctct tagcaacagc cgccagtccg gccgcccgga gcagccgccg
       61 cgggctcaac tccacccggc ggagcccggc gcgccgcagc cacacaaaag aggcgcaggg
      121 ctggagagcg cgcggccgca gggtcggcag tgtgcgcagc gggaggggac cgtggcaaca
      181 gggaaggcgc gcccgaggga agaagggctc caggcggcgc gcgggatgcg gaggacctga
      241 cacttcttgg aaactcttgg aaatggcttc cgccaccgcg cctgagggga ctgcgagccc
      301 ctggcgcagg ttcgtcccca ccgggctgtc cagccgctct cgctcccggg gctccggggc
      361 gctgtccctg cgctccgccg tcggctcggg ctgaaaagtt tctccatggt tctttgtgtc
      421 tcccgagctg ccccggtctc cctgggagga ggtgaccaag cagctagtgg gcagctggcg
      481 ctccccccac acaagcttca gccgcagcag ccctacgggc tagccttgca ttccaccagt
      541 tcaccatgat cgccaccggt ggcctactga gaatatctgc gagaaagcag gatcctctcc
      601 ggccccccag ccaggtccct aagcgcaaga ggaaagccaa gaagaggcgt aaaaacgacg
      661 tggtggtggt gaaaggcaaa ctgaagctgt gctccatctc ggggctcatt gccctttgtg
      721 ggatcctagt gctattggtg ggcatagcca tggccgtggt gggctactgg ccaaaagcca
      781 acgccgccaa cagaggtggg agcaagcagt tactgcctgt gggcagtagc catcgcattg
      841 gggccatcag caacagcagc aatggcaaca aaaacccagc caagagccac tctgggaccc
      901 cagggggtgc caactccagt tctgtgggcg ggccctggag tccgcctcct gcaagatctg
      961 cagccacctc ctcttcctct tcctcttcct cttcctcttc ctcctccacg tcggtgggct
     1021 tcttcttccg aatcttctca ggctacttgc actcagacaa gctaaaggtc ttcgggcccc
     1081 tcatcatggg tataggcatc ttcctcttca tttgcgccaa cgcggtgctc catgagaaca
     1141 gggacaaaaa aactaagatc atcaacctgc gggacctcta ttccactgtc atcgacgtgc
     1201 acagtctccg cgccaaagat ctggcagcag ctgctgctgc ggccgccgcg gctgcggctt
     1261 cctcctccgc ggctgccccc ggctccgcgt cccacggggc agcgccgctc aatggctttc
     1321 tcagctacgt gcaatctcga ggcctggagc tgaagccagg cagctgcgcg ggctctgcgg
     1381 acgcctttgg ggctgctgca atgctggcca ggggttcatg gccccacccc actgggctgg
     1441 acggaggcag cggtgagact caggaggcag ggtccccgcc ggacctggct tcatctccgc
     1501 gctgtccacg ggagccccca agtctgacag aggccgtgta cagcatctac cgcgagcgct
     1561 ccagtagggc tggccatcgc cggaccacag ttgccgcggt ggctgcggcc actgccactg
     1621 tcaccgcggc tgccagcggc ggcagcagcc cggcgccctg cagcccaacc gggagttggg
     1681 ggcgccagag caccaccagc tccctcgtgg gctcctcgct gagcgccttc gccctgttgc
     1741 ccttgcaagg ggatcgggac agagacgggg actcggaggg cgcaagctgc agctggcata
     1801 gacctcccgg ggaacgcggc tcccgggatc tccccagggg agaactggac ctgagcctga
     1861 ccgacctccg gggagccgag ggaggagcgc gctgggcttc ctgcgagccc ggggagcccg
     1921 agggcgcgaa gacagcacgc accgccaggg ggcagggcgg ccgcttgccc aggacccgca
     1981 ggtacgcggc ctggcggcgc cgcagcacca gtgggctccc ggactatcgg gctccaccgt
     2041 cgcccgagcc cccaccctcc tcgagcgcag agaacctgga ctcaggcccc tctgctacag
     2101 ccgccacgcc ctcgctccct ctgcgccccg aggaggactc gccccgcgtc cggcgggatt
     2161 cccacagttc tcagtcggat gaccagtcca gcagcaataa gggctacacc cccctgaggg
     2221 aggctgacac ctctgtagag tcggtcgtgg atgtggtggc caagaaaagg ctagactgtg
     2281 aggatgttac agatcccagt actgagcaca gctcccccga gggtcccagt ccagggccaa
     2341 ctagggcgga gcctctgtct gtgcagaggc agtttacaaa caaggagaaa ctcttcctca
     2401 tttccaggtc tcacacccca ggagtagaag accccgaatt gaaaaagtct tccaactagg
     2461 gagggcggga cagggaaagg agacacgctg gtagagtccc actggactct gcattaaaag
     2521 ccccacccac ccaccctacc ccgattcccc tgtggacagg tccgaggaaa ccattcaata
     2581 tccaaagagc tgcagaatat tatccttgaa ttacgttcac aagcttcctg tagataactc
     2641 aagcaatttt ttttaaagaa acaaagtcgt ctttttacgt ccgatggtga ttgtacgttc
     2701 gatgaaaacc aaatgtatta aaagatcaca atctagttca ttagatgaaa ctctcttaat
     2761 tttcttagga tcaaaataat atatttttga cagtaactct gtactttact cctatttttc
     2821 tttgtccagc cccgcccagc ttccctcgct cctggactct gctgctgact tcatccgtag
     2881 ctgcttgtaa aggaataaca agctttttat ttctgccctc ttgcagagtc tagaagagtt
     2941 tgtgtcaatt ctcttagaat tgaactttct aggtggagtc aaagccccaa agcatgagta
     3001 ttcgggaacg agggccccct tgcctcaccc cacgcttatc tacagctgtc caaaggattc
     3061 tattttttaa aagggatatt tgaattttgc taccagggta tgtgaagacc agagggcgcc
     3121 agcaactaca ctggattgtg acattcttaa actcacaaga ccaagtacac catgcattac
     3181 tgagtattat cacacttgta tggaaaataa cattaatatt taaagtcttt ttttaataaa
     3241 aagttcccaa acagttaaac
//
