LOCUS       NM_199199               1353 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus transmembrane protein 199 (Tmem199), mRNA.
ACCESSION   NM_199199 XM_111087
VERSION     NM_199199.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1353)
  AUTHORS   Cheng,Y.S., Zhang,T., Ma,X., Pratuangtham,S., Zhang,G.C.,
            Ondrus,A.A., Mafi,A., Lomenick,B., Jones,J.J. and Ondrus,A.E.
  TITLE     A proteome-wide map of 20(S)-hydroxycholesterol interactors in cell
            membranes
  JOURNAL   Nat Chem Biol 17 (12), 1271-1280 (2021)
   PUBMED   34799735
REFERENCE   2  (bases 1 to 1353)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY255000.1 and BC050977.1.
            
            On Aug 18, 2009 this sequence version replaced NM_199199.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC050977.1, BU514718.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164143
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-37                BY255000.1         1-37
            38-1353             BC050977.1         1-1316
FEATURES             Location/Qualifiers
     source          1..1353
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 46.74 cM"
     gene            1..1353
                     /gene="Tmem199"
                     /note="transmembrane protein 199"
                     /db_xref="GeneID:195040"
                     /db_xref="MGI:MGI:2144113"
     exon            1..272
                     /gene="Tmem199"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..688
                     /gene="Tmem199"
                     /note="RE40914p"
                     /codon_start=1
                     /product="transmembrane protein 199"
                     /protein_id="NP_954669.2"
                     /db_xref="CCDS:CCDS25108.1"
                     /db_xref="GeneID:195040"
                     /db_xref="MGI:MGI:2144113"
                     /translation="MASSLLAGERLVRALGPGGELEREQLPRKLRAQLEAALGKKHAG
                     SDNATGPRRLVSFRLIRDLHQHLRERNSRLYLHELLEGSDIYFPEIVKPPRNPELVAR
                     LEKIKIQLANEEYKRITRNVTCQDAQCGGTLSDLGKQVRSVKALVVTIFNFIITVAAA
                     FVCTYLGSQYVFTEMASRVLAALIVASVVGLAELYVMVRAMEGELGEL"
     exon            273..346
                     /gene="Tmem199"
                     /inference="alignment:Splign:2.1.0"
     exon            347..436
                     /gene="Tmem199"
                     /inference="alignment:Splign:2.1.0"
     exon            437..479
                     /gene="Tmem199"
                     /inference="alignment:Splign:2.1.0"
     exon            480..592
                     /gene="Tmem199"
                     /inference="alignment:Splign:2.1.0"
     exon            593..1343
                     /gene="Tmem199"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1318..1323
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem199"
                     /note="hexamer: AATAAA"
     polyA_site      1343
                     /gene="Tmem199"
                     /note="major polyA site"
ORIGIN      
        1 atccggcgcc tgtgagcgga agtccgagtt tgggatcacc tgatcagagc gtgaggcaga
       61 aatggcgtct tccttgcttg ccggcgaacg actggttcgc gctttgggtc ctggcggaga
      121 actggaacgg gagcagctcc cccggaagct gcgtgcccag ctcgaggctg ctctgggaaa
      181 gaaacacgcg ggcagtgata atgccacggg accccggcgc ctggtttcat tccgtctcat
      241 ccgagatctg catcagcacc tgagagaaag aaattccagg ctgtatcttc atgaactcct
      301 agaaggcagt gacatctact ttccagagat tgtgaagcct ccccggaatc cagagctagt
      361 tgcccggcta gagaagatta agatacagct agccaatgag gagtataagc ggatcactcg
      421 caatgtcact tgtcaggatg cacagtgtgg ggggactctc agtgacctgg gaaagcaagt
      481 gaggtcagtg aaggctctgg tcgtcaccat cttcaacttc attatcacag tggcagctgc
      541 ctttgtctgc acttacctag gaagccagta tgtcttcaca gaaatggcct cgagagtgct
      601 ggctgcattg atcgttgcct cggtggtagg tctggcagaa ctgtacgtca tggtaagggc
      661 aatggaagga gaactgggcg agctgtaact ggtgtttcac catcagagtc tggaagaagt
      721 gtggggagcc ccagactcca ttgcccatca cagactctca gtcaacccac aatgctcttt
      781 gtattcagct ccagttagtc agaggaccag gtcaggttct ttggggagcc tgtctgctgt
      841 gaatttcctt ggggaggagt agaggagatt cagacagtgt ttctgtaaaa ctaaaaagac
      901 tgatctcagt aacttctgaa tccagtgccc atcatctgcc tttgctggtc cattttgggg
      961 tctactgagt ctggtttttc tcataaaagt aagtagaacc caggccttta ccccaaatgg
     1021 actctactgc cttgaactgg cccaatagtc agaagacagg catccataga agaaaaacca
     1081 gttgatacag gatggtggaa ctagaagcca ggcagctaac tctgtagaaa aggaaatggt
     1141 atcaggccat tttccagagc ttatatggcc tgagagaaat cagatgatca gtatggccct
     1201 catgttaaaa ggagccaaag atgtctgcat tgtcctactg tcttgttacg ttacactgtt
     1261 cagaacttag ataagttaaa gaatctgtct aaggcacttg aaagatgtta tttattcaat
     1321 aaatatttat cgtgttcact gtaaaaaaaa aaa
//
