LOCUS       NM_153596               1370 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus transmembrane protein 17 (Tmem17), mRNA.
ACCESSION   NM_153596
VERSION     NM_153596.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Chih,B., Liu,P., Chinn,Y., Chalouni,C., Komuves,L.G., Hass,P.E.,
            Sandoval,W. and Peterson,A.S.
  TITLE     A ciliopathy complex at the transition zone protects the cilia as a
            privileged membrane domain
  JOURNAL   Nat Cell Biol 14 (1), 61-72 (2011)
   PUBMED   22179047
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL731818.6.
            
            On May 1, 2007 this sequence version replaced NM_153596.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC030386.1, FO713962.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-301               AL731818.6         136968-137268
            302-405             AL731818.6         141873-141976
            406-519             AL731818.6         142093-142206
            520-1370            AL731818.6         143066-143916
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 14.17 cM"
     gene            1..1370
                     /gene="Tmem17"
                     /note="transmembrane protein 17"
                     /db_xref="GeneID:103765"
                     /db_xref="MGI:MGI:2144205"
     exon            1..301
                     /gene="Tmem17"
                     /inference="alignment:Splign:2.1.0"
     CDS             202..798
                     /gene="Tmem17"
                     /codon_start=1
                     /product="transmembrane protein 17"
                     /protein_id="NP_705824.1"
                     /db_xref="CCDS:CCDS24470.1"
                     /db_xref="GeneID:103765"
                     /db_xref="MGI:MGI:2144205"
                     /translation="MELPDPVRQRLSNLSLTVFGDSSRTGPESSDAADNEMVSSLALQ
                     MSLYFNSYFFPLWWVSCIVMLHLKYSILPDYYKFIVVTVVILITLIEAIRLYLGCMGN
                     LQEKVPELAGFWLLSLLLQLPLILFLLLNDGLRNLPLEKAIHIIFTIFLTFQVISAFL
                     TLKKMVNQLAARFHLQDFDQLSSSSAAVRRVRQCTEEL"
     exon            302..405
                     /gene="Tmem17"
                     /inference="alignment:Splign:2.1.0"
     exon            406..519
                     /gene="Tmem17"
                     /inference="alignment:Splign:2.1.0"
     exon            520..1370
                     /gene="Tmem17"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1172..1177
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem17"
                     /note="hexamer: TATAAA"
     polyA_site      1192
                     /gene="Tmem17"
     regulatory      1353..1358
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem17"
                     /note="hexamer: ATTAAA"
     polyA_site      1370
                     /gene="Tmem17"
                     /note="major polyA site"
ORIGIN      
        1 cactaggcca cgttaggctg cgggcccgtg gccctggctc gcctctccaa ggggaagcct
       61 ctggaggatt ctgtagcgtt cggggaagcc caggtaccag gtccctaggg gccccgcact
      121 gcccggttgc caagggaacc gccacgcgcc gctgtgcccg ccgactagcg ggtgtgtgag
      181 aggccagcgg gcaggccagg catggagctg ccggaccctg ttcgccagcg cctgagcaac
      241 ctcagcctca ccgtgttcgg cgactccagc cgcaccgggc cagagtccag tgatgcggcc
      301 gataatgaaa tggtctccag cctggccttg cagatgtccc tttattttaa ctcttacttt
      361 ttcccactgt ggtgggtgag ctgcattgtg atgctgcacc tgaagtattc catcttgcct
      421 gactactaca aattcattgt ggttactgtc gtcatcctca taaccttgat tgaagcgatc
      481 cggttatacc tgggctgcat gggtaacctt caggagaagg ttcctgagct agctggcttt
      541 tggcttctga gccttctact gcagttgcct ttaatccttt tcttgctcct taatgatggc
      601 ctaaggaatc tgcccctgga gaaagcaata catatcatct tcaccatctt tcttactttc
      661 caagtcatct cagcatttct gaccctaaag aaaatggtca accagctggc agcccgtttc
      721 cacctccagg actttgatca gctgtcttca agcagtgcag ctgtaaggag ggtaagacaa
      781 tgcacggaag agctctgacc acctgctgac catatgctga gtggtgaacg acagaaagat
      841 gatacaagag gaccaggaag tgagagagtg acaggacatc tgagtcgggc ccgagaaagg
      901 ggacatacgt gctggggtgt gtcctccagc tctgaaatcc ccatggaggc aatgccaagg
      961 ctcactcata tcaaccctgc agctgagggg atattcctga tgttggatga gtctgttggc
     1021 agtttcatac caccgtttct ataatatttc tgattataat ctgtgacaag aaatgtatgg
     1081 cacttcagac gaaattgctt tgttcagtgg aatctcacca agtgtgacaa caccctccag
     1141 gacatgtcct agctcagggg gagtcagcta atataaaatg aactccgtgg tattcttgtg
     1201 gactttttgt tttattttgc tttggttttg gcatttctgt cttattatta aagagtaaaa
     1261 agatgagatg gagttgggaa aggggaaaac atgaaaaata tatggtatga agaaaagaat
     1321 taatagaagg ccataaaaca taagctattg atattaaaat atccacaaca
//
