LOCUS       NM_028135               2517 bp    mRNA    linear   ROD 28-JAN-2025
DEFINITION  Mus musculus transmembrane protein 163 (Tmem163), mRNA.
ACCESSION   NM_028135 XM_129450
VERSION     NM_028135.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Prajapat,M., Sala,L. and Vidigal,J.A.
  TITLE     The small noncoding RNA Vaultrc5 is dispensable to mouse
            development
  JOURNAL   RNA 30 (11), 1465-1476 (2024)
   PUBMED   39209555
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Forsyth,K.S., Toothacre,N.E., Jiwrajka,N., Driscoll,A.M.,
            Shallberg,L.A., Cunningham-Rundles,C., Barmettler,S., Farmer,J.,
            Verbsky,J., Routes,J., Beiting,D.P., Romberg,N., May,M.J. and
            Anguera,M.C.
  TITLE     Maintenance of X chromosome inactivation after T cell activation
            requires NF-kappaB signaling
  JOURNAL   Sci Immunol 9 (100), eado0398 (2024)
   PUBMED   39365876
REFERENCE   3  (bases 1 to 2517)
  AUTHORS   Mao,M., Kuo,Y.M., Yu,A.K., Labelle-Dumais,C., Ou,Y. and Gould,D.B.
  TITLE     TGFbeta Signaling Dysregulation May Contribute to COL4A1-Related
            Glaucomatous Optic Nerve Damage
  JOURNAL   Invest Ophthalmol Vis Sci 65 (5), 15 (2024)
   PUBMED   38717426
REFERENCE   4  (bases 1 to 2517)
  AUTHORS   Edwards,G.A. 3rd, Wood,C.A., He,Y., Nguyen,Q., Kim,P.J.,
            Gomez-Gutierrez,R., Park,K.W., Xu,Y., Zurhellen,C., Al-Ramahi,I.
            and Jankowsky,J.L.
  TITLE     TMEM106B coding variant is protective and deletion detrimental in a
            mouse model of tauopathy
  JOURNAL   Acta Neuropathol 147 (1), 61 (2024)
   PUBMED   38526616
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 2517)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   6  (bases 1 to 2517)
  AUTHORS   Grieshammer,U., Lewandoski,M., Prevette,D., Oppenheim,R.W. and
            Martin,G.R.
  TITLE     Muscle-specific cell ablation conditional upon Cre-mediated DNA
            recombination in transgenic mice leads to massive spinal and
            cranial motoneuron loss
  JOURNAL   Dev Biol 197 (2), 234-247 (1998)
   PUBMED   9630749
REFERENCE   7  (bases 1 to 2517)
  AUTHORS   Larsson,N.G., Wang,J., Wilhelmsson,H., Oldfors,A., Rustin,P.,
            Lewandoski,M., Barsh,G.S. and Clayton,D.A.
  TITLE     Mitochondrial transcription factor A is necessary for mtDNA
            maintenance and embryogenesis in mice
  JOURNAL   Nat Genet 18 (3), 231-236 (1998)
   PUBMED   9500544
REFERENCE   8  (bases 1 to 2517)
  AUTHORS   Meyers,E.N., Lewandoski,M. and Martin,G.R.
  TITLE     An Fgf8 mutant allelic series generated by Cre- and Flp-mediated
            recombination
  JOURNAL   Nat Genet 18 (2), 136-141 (1998)
   PUBMED   9462741
REFERENCE   9  (bases 1 to 2517)
  AUTHORS   Lewandoski,M. and Martin,G.R.
  TITLE     Cre-mediated chromosome loss in mice
  JOURNAL   Nat Genet 17 (2), 223-225 (1997)
   PUBMED   9326948
REFERENCE   10 (bases 1 to 2517)
  AUTHORS   Lewandoski,M., Meyers,E.N. and Martin,G.R.
  TITLE     Analysis of Fgf8 gene function in vertebrate development
  JOURNAL   Cold Spring Harb Symp Quant Biol 62, 159-168 (1997)
   PUBMED   9598348
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CA319657.1, AK042650.1 and AC130527.4.
            
            On Oct 4, 2007 this sequence version replaced NM_028135.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC059048.1, AK042650.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-354               CA319657.1         1-354
            355-2336            AK042650.1         104-2085
            2337-2517           AC130527.4         37860-38040
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 55.77 cM"
     gene            1..2517
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /note="transmembrane protein 163"
                     /db_xref="GeneID:72160"
                     /db_xref="MGI:MGI:1919410"
     exon            1..591
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     exon            592..711
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     exon            712..755
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     exon            756..847
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     exon            848..944
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     exon            945..1056
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     exon            1057..1198
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..2517
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1942..1947
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /note="hexamer: AATAAA"
     regulatory      1950..1955
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /note="hexamer: ATTATA"
     polyA_site      1962
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
                     /note="major polyA site"
     polyA_site      1969
                     /gene="Tmem163"
                     /gene_synonym="2610024A01Rik; A-cre; Act-Cre; actin-cre;
                     cre<actin>; SV31; Tg(ACTB-cre)2Mrt"
ORIGIN      
        1 cgcgacgtga gtggggggcg cgtcctccgt cacgccctca cccagccctg cgctacccgc
       61 aggctggtcc ccacgccccc taacagttcc ctcagcttcc acgcgtctgg accgtccggg
      121 gccctccctc tccactcgcc tgggtgcatc gataccagtg cccgggctta gcgcctcggg
      181 gcgggtccct gccgcccgca cctgcccccg ggggcggagc gcagcggcga cagcgcggca
      241 ccagcctccg ccactcggtg tgctagcggc ggacctgccg ctcaccgcgg tacgggcgaa
      301 gctctctctc ggtgccctcg gtctctggca ctttggactt cgtgtctcca tcgtggtcgg
      361 cttcgcctcg ggggatctgc agccccggcg ccatggagcc ggctctgggc agcgagcgcc
      421 gcagcccccc tggccccgga gtcccgcggc cgccaccgcg gggccacgcg ccctcgaccg
      481 ccgcccccgc ccccagcccg gctccgatga gctcctctgt gcagtctgat gaggaaaggc
      541 agccacggat cagcgagagc ggccagttca gcgacgggtt ggaagaccga ggtttactag
      601 aaagcagcac ccggctgaaa cctcatgaag cccagaacta caggaagaag gcattgtggg
      661 tatcctggct gtccattatt gtcaccctgg ccctggcagt ggccgccttc actgtctccg
      721 tcatgaggta cagcgcctct gccttcgggt ttgcatttga tgccatcctg gatgtgctgt
      781 cctcggccat tgtcctctgg cgttacagca atgcggctgc tgtgcactct gcaaacaggg
      841 agtatatagc ctgtgtcatc ttgggggtga tctttcttct gtcatctata tgcatagtgg
      901 tcaaagccat ccatgacctc tcaactaggc tgctccctga agtggatgat ttcctgttca
      961 gcgtctccat tctaagcggg atcctttgca gcgtactggc tgtgctgaag tttatgctgg
     1021 ggaaggtcct gacaagcagg gctctcatca cagacgggtt caactccctt gttgggggcg
     1081 tgatgggctt ctccatcctt ctaagtgcag aagtgttcaa acacaacgca gcagtctggt
     1141 acctggacgg cagcattggt gtcctgattg gtctcaccat ctttgcctac ggggtcaaac
     1201 tcctcatcga catggtgccc agagtgagac agacgcgtca ttatgaaatg tttgagtgaa
     1261 ggcagcagga agggcggcag ggactgccag ccccgatgaa gagcgtcact tgacaagagg
     1321 tttccacgca ggcagatggt gccaacattc aactgcacat ccagtttcat tttgggaagt
     1381 tttcgttcat agagtctgtc atcatgggct ggggtctgcc agaggctgga cctgccctac
     1441 atcctcaccc agtcgcccac catcaaacat gttaggatga cgttgcccgt gggaggggcc
     1501 gccatgcttc ccaaccttga gccggaagtg acatttttct atttcctgga gtcaaacagt
     1561 tcttggaggc aggctagggt ctctgcttga caggaagcct gtggtgcaca ctgtcagcca
     1621 aaaccagata gtaactgact gggtcacctc cacctgacat gtggccgaac cacctctaga
     1681 gtcacactct cctagcagat gccatcggta cagcacttcc taactcctac caacacgttt
     1741 cctacacttt tactaatccc aacactaaac cggttcgttc agaaggaggc cattctattt
     1801 tttaaagtgt ttagtgatct tgagctttgc atggacaagc tacgtaagca cacagccctt
     1861 tccttcacgt ctagaaccca cacatctgta aaaacccagg agccattttt gagagatgtg
     1921 aacctctaaa catttatttg taataaataa ttataatcat caccccgaat ctgcatatct
     1981 ctatatgctg gtcacagtac ctcagtctgt gagacgtggg ccgctccttc agaaggaaca
     2041 agatgccctc agtttatgta acattagata tgtgctgtag acatgccctc attccaccat
     2101 gttctgtagc tctcacagta ctgcccacac gggcagccat gtcaggccta taaagacctt
     2161 taccatttgt acgatgtggg gaggttgtat ttgagagctg gtagtgtgtg tgccaacatg
     2221 tagggagtac acgttgtggg caggctcgct ctctctctct ctcctctgtt tcctttgtgt
     2281 gttcgcatgt ggagtttgtt tgtttattta tttatgaatg aaacagtccc tcacccaaac
     2341 tagagctcgc tggttcagcg agcctgtgag tcttgggaat ctgtttatct tgttttccca
     2401 gtattggggt ttcaccatca gaggcggctt cctgtgggtg ctgtggagct gacatcaggt
     2461 cttccttttt gtacagcaag tgttctgctc aatgagtcat tcccccatct ccagcag
//
