LOCUS       NM_177260               3342 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus transmembrane protein 154 (Tmem154), mRNA.
ACCESSION   NM_177260 XM_001005808
VERSION     NM_177260.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3342)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AK081441.1.
            
            On or before May 4, 2006 this sequence version replaced
            XM_001005808.1, NM_177260.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK081441.1, BC096432.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849380, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3342
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 37.7 cM"
     gene            1..3342
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /note="transmembrane protein 154"
                     /db_xref="GeneID:320782"
                     /db_xref="MGI:MGI:2444725"
     exon            1..224
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             161..706
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /codon_start=1
                     /product="transmembrane protein 154 precursor"
                     /protein_id="NP_796234.1"
                     /db_xref="CCDS:CCDS38467.1"
                     /db_xref="GeneID:320782"
                     /db_xref="MGI:MGI:2444725"
                     /translation="MTVPCAALVLALGLAFGQSSQGNDEESEYSGQSITEEENSEDET
                     TRSALATVTTEALAENVNSTHTNDTSNQVEFILMVAIPLAALLILLFMVLIATYFKSK
                     RPKQEPSSQGSQSALQTHELGGETLKVPIFEEDTPSVMEIEMEELDKWMNSMNRNADY
                     ECLPTLKEEKEPNPSPSDNES"
     exon            225..479
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            480..518
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            519..546
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            547..632
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            633..690
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            691..3342
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1768..1773
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1787
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
     regulatory      3160..3165
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
                     /note="hexamer: AATAAA"
     polyA_site      3182
                     /gene="Tmem154"
                     /gene_synonym="9930117H01Rik"
ORIGIN      
        1 agtctgacag gctcctgcag agttacatca cttcctaaaa atcaggcaaa cacctctcct
       61 tcaagtgagc accgacccaa aggagcagga aacaggaaat gtgcgcgttg gagggaggcc
      121 ggggcttcgc agcatcctga gcgcaggcga gccagctgac atgaccgtgc cctgtgctgc
      181 gttggtcttg gccctggggc tcgcgtttgg tcaatccagc cagggaaatg acgaggagtc
      241 agaatactca ggacagagca tcacagaaga agaaaactcg gaggacgaga cgacgagaag
      301 tgctctggct acggtgacca cagaagcatt agctgaaaat gtgaattcta cccacaccaa
      361 cgacacctca aaccaggtgg aatttatatt aatggtggcg atcccactgg ctgcgctgct
      421 catccttcta ttcatggttc tcattgcgac ctactttaaa agcaagagac ctaagcaaga
      481 gccttctagc caaggatctc aaagtgcctt gcagacacat gaacttggag gtgaaaccct
      541 gaaagtccct atttttgaag aggacacacc ctctgttatg gaaatagaga tggaagagct
      601 tgataaatgg atgaacagca tgaacagaaa cgccgactat gagtgtttac ctactttgaa
      661 ggaagaaaag gaaccaaacc ccagcccaag tgacaatgaa tcctaagtcc aagaggcgtt
      721 gatgttttcc aagagcgtac ttccggaggg cacctgccag cctgccaggg gaggatgaag
      781 aagagacaag tttaattaat ttcaaatcag tgtagacaca agagcatttt agtgtttctt
      841 ccactgtccc ctctccggac gatgacatcc cctggacttg gaagaatgag ggactgaagt
      901 cttggaaagg cctggctgcc tgccagccca ctcatggtga gggagccctg tgtggtgctg
      961 gcttcagatc agtgggggtc cctccccatt gtctcctcct caatcattct ggtcacccta
     1021 agatcacagc actggtctgc tttactccca gtgtttgaat caggaagctg atcttcttcc
     1081 gggtcacctt actgcctaac aggcttggat aatatcctct cactgttcat ggcctctcag
     1141 gtcgactcta gccgtctgga actttcctca aggacagttg tgttatggaa aacatgacaa
     1201 acaaagccgg tgtttcatag ccgcaccatc ccggtgagtc gttaagcttg ttccttacct
     1261 gctaagaaaa cacaacaaga aagtccacag tcctcttggg agattcttgc actcagccac
     1321 atctgagtca cttttgaaaa cttcgcagaa gaaatagcca tctttaaaga gagaagcaac
     1381 tttttccttc tcggctaaaa tcacctctgc ttgcaacatc tcaaaactgc tgatcttgtg
     1441 tcaagccgca ggcctggcct gtgcagtgtg ggcttggaat gcccgcagat tggggtcatc
     1501 tgttgtcctt ctgtatcttg gagatcttca aggctgagca agaaagagct gtacccgtgg
     1561 cagcttcggc tcactgtgct gtgtggtctc tctgcacttt acatgcggcc tttcctgtag
     1621 gctgggaaga gtctccaatc ctcagcactc caggaggtgg ctatcaggcc atcagaaatg
     1681 acattctatg taaaattagt tgacgtccat gtactaaaaa acaatggagt aaaaaaatgc
     1741 agaaaacccc actaacctct cctccgcaat aaagccagtc catttaatcc ttcgttctct
     1801 aattctgacc tttaaacggc cgtctagcaa attgaatctc tggttctcct gggatgcctg
     1861 gtattttatt ccaggaaaga aacaaagaat gaaattttta ttttgctaac cacatataaa
     1921 ctgaggggag atgaggttaa ccaaactctt tgctgctgaa ttggggttct gtggttgaaa
     1981 ggctgccctc atgctccaca gagagccttc tcctgccccc ttggggcccc tttaatgagc
     2041 tcttgccttc tgagatatgc agataatttt ataggcagag ccgcaggcca gggtggtctc
     2101 tctacataga atacgtcctg aatcccggct ctcctactgt cttgggactg tgcagttctc
     2161 agacaaaagg ctgtgctttg acagtgtatc ctcaacagac ttgatctgtc tcagtgttct
     2221 cactcagaca ggactcggag gcattgccct gtggacactg ccctgactct cagacagtca
     2281 cccggcaggc agatgcagcc ttctgagtca tcactcgtct accctgcccg taacggctac
     2341 ttttaatttg tttctctttc tctgaaaagt ctagttcctt ctttcttggg gtgtctaaga
     2401 tcctccatga ttacccaggc ctttgacctt gatccaaccc tgcccaatac cagacttcaa
     2461 aatttctcag aagtgtatga ggtgtcgggc tgttactttt gataaaggcg tgtcttgtga
     2521 gatgataaca cagttctcat tcgatatgtc aaataacctc agactcctga agaaacaaat
     2581 tgaccagcat gctcttgagt ttacatctga gaactgtgtt gacttttcta gctacatagg
     2641 aactttctac agagctatgt tgttctggca agactcgtgc cattagcatg ggccaagcag
     2701 tcaaattaag cctatggtcc tgattatgac tgtataatct gagcacacca agtgtgtgtg
     2761 acaactccat gaattcttaa gacagaaata tttatttttt tacattatta gtaggagaag
     2821 aaaccctcat caatttgcct tagctggata gctaatcaga acaaatcaga ttttaaaata
     2881 aagaaggccg tggaatttat ctctgttcct gggttgtttg ccttacgttc ccagagctct
     2941 gggtttgacc tctagcactg tataaactgg gcatggttgc agaaagacca ttcctacaag
     3001 cacaagttta ttcacagata catagtgagt ttgaggtcac cctggaatat gtaagcctgt
     3061 gactcaaaaa caattttttt aagacacatg cttttgtgta tttttttttt ttaaagcaca
     3121 gtagcattgc ttagctgaac ttcttcagaa acttgtttca ataaacatgt ttttaaaatc
     3181 catttgggac tcctttttaa aaagaactta ctgaatttat tctttgacag tttcatatat
     3241 gtacgtatat gtatgaagtg cgttctgatt tctgtagccc cagcctctct aatctccttc
     3301 tcaccccctc acccttccta caaataaatc tcttctacac at
//
