LOCUS       NM_177735               2734 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus transmembrane protein 130 (Tmem130), mRNA.
ACCESSION   NM_177735
VERSION     NM_177735.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2734)
  AUTHORS   Turrero Garcia,M., Stegmann,S.K., Lacey,T.E., Reid,C.M.,
            Hrvatin,S., Weinreb,C., Adam,M.A., Nagy,M.A. and Harwell,C.C.
  TITLE     Transcriptional profiling of sequentially generated septal neuron
            fates
  JOURNAL   Elife 10, e71545 (2021)
   PUBMED   34851821
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2734)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2734)
  AUTHORS   Loo,L., Simon,J.M., Xing,L., McCoy,E.S., Niehaus,J.K., Guo,J.,
            Anton,E.S. and Zylka,M.J.
  TITLE     Single-cell transcriptomic analysis of mouse neocortical
            development
  JOURNAL   Nat Commun 10 (1), 134 (2019)
   PUBMED   30635555
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2734)
  AUTHORS   Tang,T., Li,L., Tang,J., Li,Y., Lin,W.Y., Martin,F., Grant,D.,
            Solloway,M., Parker,L., Ye,W., Forrest,W., Ghilardi,N., Oravecz,T.,
            Platt,K.A., Rice,D.S., Hansen,G.M., Abuin,A., Eberhart,D.E.,
            Godowski,P., Holt,K.H., Peterson,A., Zambrowicz,B.P. and de
            Sauvage,F.J.
  TITLE     A mouse knockout library for secreted and transmembrane proteins
  JOURNAL   Nat Biotechnol 28 (7), 749-755 (2010)
   PUBMED   20562862
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC131728.4.
            
            On Nov 17, 2006 this sequence version replaced NM_177735.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC067004.1, SRR9219383.120115.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               AC131728.4         93263-93384
            123-428             AC131728.4         99325-99630
            429-588             AC131728.4         102394-102553
            589-755             AC131728.4         103859-104025
            756-840             AC131728.4         106100-106184
            841-1043            AC131728.4         111043-111245
            1044-1156           AC131728.4         116925-117037
            1157-2734           AC131728.4         117349-118926
FEATURES             Location/Qualifiers
     source          1..2734
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 84.76 cM"
     gene            1..2734
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /note="transmembrane protein 130"
                     /db_xref="GeneID:243339"
                     /db_xref="MGI:MGI:3607706"
     exon            1..122
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..1306
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /codon_start=1
                     /product="transmembrane protein 130 precursor"
                     /protein_id="NP_808403.2"
                     /db_xref="CCDS:CCDS19851.1"
                     /db_xref="GeneID:243339"
                     /db_xref="MGI:MGI:3607706"
                     /translation="MAKATDVLVFWFACLLLLGPARVAAGLYNLSLTADGPATVGTEV
                     TISASLEVKDNGSLPLPADTHLYRFHWIHTPLTLTAKNEKNLTSTIHVVGGVPGDFPI
                     SVWVTAVDCWVCQPLARSTLLLPIKESLVGNIVVTQNTSLSWPNSYITKRSLRLSFLL
                     HDPSDFFKSASFFYRWDFGDGTLLITDNPVVYYNYSSPGTFTVKVRVVAEWEQIKPDT
                     TKGTIQKTGDFSASLDLRESLQGIQILGPTLLQTFQKLTMNLNFFGSPPLHVCWGLKP
                     QCLPLEDRECHAVLVTRTSFNLTHVFQDPGDYCFIFRAENAISKAHQYHRIQVWPSSF
                     QPFVFAFPCATLITVLLVFLMYMTVRSAATQKDIVESPGATGLKCCCQVCCGSLFLDS
                     PSEYLEIVRENHGLLPPLYKPVKTYNV"
     exon            123..428
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     exon            429..588
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     exon            589..755
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     exon            756..840
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     exon            841..1043
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     exon            1044..1156
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     exon            1157..2734
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2713..2718
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /note="hexamer: AATAAA"
     polyA_site      2734
                     /gene="Tmem130"
                     /gene_synonym="C130036G08"
                     /note="major polyA site"
ORIGIN      
        1 gctccctgag catcctcccc gcgcccctcg gtatccacgc ttcgccatgg ccaaggccac
       61 cgacgtcctc gtcttctggt tcgcttgcct cctgctcttg ggtccggcga gggtggcggc
      121 aggtctctat aatcttagtc ttactgctga cggtcctgct accgtgggca ccgaagtgac
      181 catctcagcc agcctggagg tcaaggacaa tggaagcctg cccctgcctg cagacaccca
      241 cctctaccgt ttccactgga tccacacacc tctgacactc actgccaaga atgagaagaa
      301 tctaacctcg accatccacg tggtgggcgg cgtgcctggg gacttcccaa tctctgtctg
      361 ggttactgct gtcgactgtt gggtgtgcca gccattagcc aggagcactc tactcctccc
      421 cattaaagag tcccttgtgg gaaacattgt cgttacccag aacacctccc tgtcttggcc
      481 gaactcctac atcaccaaga gaagtcttag actgtccttt cttctccatg acccaagcga
      541 cttcttcaag tccgcttcct tcttttaccg atgggacttt ggagacggga ccttgttgat
      601 aactgacaac cctgtggtgt attacaacta ctcgagccct ggaaccttca cagtgaaagt
      661 cagggtggtg gcagaatggg agcagataaa gccagacacc acaaagggca ctatacagaa
      721 gactggtgac ttctcagcat cgttggatct gcgggagtcg cttcaaggca tccagatttt
      781 ggggcccacc ctcctgcaga cattccaaaa gctgacaatg aacctgaact tcttcggaag
      841 cccaccgctg catgtgtgct ggggtctcaa gccgcagtgt ctcccactgg aggacagaga
      901 atgccacgct gtgttggtga ctcggacatc ttttaacctg acccacgtct tccaggaccc
      961 cggggactac tgcttcatct tccgtgctga gaatgctatc agcaaggctc accagtacca
     1021 caggattcag gtgtggccct ccagcttcca gccatttgtc tttgctttcc cgtgtgccac
     1081 gctaatcacc gtgctgctgg tttttctcat gtatatgact gtgcggagcg ctgcaaccca
     1141 gaaggacatc gtggagagcc caggggccac tgggctcaag tgttgctgcc aggtgtgctg
     1201 tggatccctc tttctggact ccccgtctga gtacctggaa atcgtccgag agaaccacgg
     1261 gctgcttcca cccctctaca aacctgtgaa aacttacaat gtgtgaactc ccatcccata
     1321 cctctcagta ttcaccgatc acccatcggg agcttcgggc agggtggcct atgctactga
     1381 gcaggagggg tttacaccgg ggtgaccgtt tgcccagacg ggtcaccgat ctgtacagtc
     1441 cagctgacat cattcgtcct ttgtgtcgcc tccccactgt catctactca tccgtacagt
     1501 ctagtcagtg ctgtaagctg ttcccagtca ccctccccca ccccctctac caagcaggat
     1561 tctgatcttt ggtgtgttgt gttaagactc tcccaagtgg gtctggctgc cccttgccca
     1621 ttgctcactg gggactactg aggtccctgg caatgcagct ccgcccaagc cagaaggaac
     1681 gaggaaggag gtcacagatg gttaaggaca gatagtgaaa gataacacga tcagatagat
     1741 gggctcgatt acagcaagga agggcacacg tggaggtgat ggagcacctg agatgatttg
     1801 ctgcgtatct ggaaggcttg ttgctgggat ggatttgaac tagacctcaa aggtggcacc
     1861 cgagcctggc ctcccttgcc ctctgtcctt tgtctctaca gtcccatgac caggccattc
     1921 tgtacccccc ccccccgcct gcttgctgga agctgggtgg ggggtggggg cagaatgagc
     1981 accctgtgag tgtagaatgt tttgtaagtg gatcctcttt ccttgaaatc tgtaagctca
     2041 atgtccaccg aggaaaaagt aattgggggc aaataaaaga aaggttgaga tagagaggat
     2101 ttgggatagc agcctcgtac tactcagtct tgatgtctgc ccccctctct ctgtctctct
     2161 ttctctttct gtgtgtgggt gtgtatgtgc ttgtgtgtgt gtagtgtagt gtgatacctt
     2221 acccactcag ttactcccaa ggtagcagaa gaaaaaaagc aggaggcaga cgatgctttg
     2281 aaagatgata aaagatgatc aggagaagcc tggcatggtg gtgcacacct ttaacctcag
     2341 cactcgggca gcaaaggccg gtagatatca gatcagagtt caaggtcagc ctgctctaca
     2401 tagtgagttc caggacgtcc agagtcacat agggagttcc tgtctcaaaa aaagggaggg
     2461 aggaaggaag gaaggaagga aggaaggaag gaaggaagga aggaaggaaa catggtacgt
     2521 aggtgtggct gtaagcttcc aggcttcccc tggtacccgg catgccaggg tagcctgcac
     2581 ctgcaggata aggatgatca agtctgggaa ggtagatctc gtgtcactgt aactgttggc
     2641 ccttggatat cctgctgaaa tagtattgtc tcttgtaccg ttcattccca tgacatgcca
     2701 ccattgttct tgaataaagg ctccaccaag caca
//
