LOCUS       NM_172383               1879 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus transmembrane protein 125 (Tmem125), mRNA.
ACCESSION   NM_172383
VERSION     NM_172383.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1879)
  AUTHORS   Shalom-Barak,T., Zhang,X., Chu,T., Timothy Schaiff,W., Reddy,J.K.,
            Xu,J., Sadovsky,Y. and Barak,Y.
  TITLE     Placental PPARgamma regulates spatiotemporally diverse genes and a
            unique metabolic network
  JOURNAL   Dev Biol 372 (1), 143-155 (2012)
   PUBMED   22967998
REFERENCE   2  (bases 1 to 1879)
  AUTHORS   Frankel,W.N., Yang,Y., Mahaffey,C.L., Beyer,B.J. and O'Brien,T.P.
  TITLE     Szt2, a novel gene for seizure threshold in mice
  JOURNAL   Genes Brain Behav 8 (5), 568-576 (2009)
   PUBMED   19624305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB653717.1, AK162907.1 and BU700816.1.
            
            On Jan 4, 2008 this sequence version replaced NM_172383.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BB653717.1, AK050146.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849376
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-329               BB653717.1         1-329
            330-1848            AK162907.1         1-1519
            1849-1879           BU700816.1         1-31                c
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 54.81 cM"
     gene            1..1879
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /note="transmembrane protein 125"
                     /db_xref="GeneID:230678"
                     /db_xref="MGI:MGI:1923409"
     exon            1..127
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            128..271
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            272..431
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            432..1862
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             571..1221
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /codon_start=1
                     /product="transmembrane protein 125"
                     /protein_id="NP_759015.2"
                     /db_xref="CCDS:CCDS51285.1"
                     /db_xref="GeneID:230678"
                     /db_xref="MGI:MGI:1923409"
                     /translation="MSQQASVGRGLPPDVLAEQVELWWSQQPRRSLLCFSVAVILVAG
                     CGAGGVALLSSTSSRSGEWRLAVGTVLCLLALLVLVKQLMSSAVQDMNCIRQAQHVAL
                     LRSGGGADAVVVLLSGFVLLVTGLTLAGLAAAPAPARPLAAMLSVGITLASLGSVLLL
                     GLLLYQVGVSGHCPPICTEAFSAQNGHGDNSSIFSISGQLSSGQRHETTSSIASLI"
     regulatory      1808..1813
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /note="hexamer: ATTAAA"
     regulatory      1835..1840
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1840
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /note="major polyA site"
     polyA_site      1862
                     /gene="Tmem125"
                     /gene_synonym="6330530A05Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtgccaggca acctctctgc aaagggcaga gcggtcccct actctgtctc gttggagtaa
       61 aaacgtggtc tcggcagtgt ggtccatgtg ggttctgatt caccccgagt ctctctggct
      121 caaaaaaaaa aagcctctaa gaggtgagct ggggcttccc tgccccactc ccgtccctcc
      181 tggactcgca gctgacacct acaggatcgg tctctcctgc tgccggaagt tgggttcctt
      241 gccggcagtg ctagctttat ttttacctga tcttccccca cccaggaccc agcagtgaca
      301 gctgaggcca tgtgagtctg atcctgaatg aggcattatc tctgacagtt tgtcctgtca
      361 tccactgtgg caccaccagc ttcctccgac agcctggatg gaacaggcca ccgagacagc
      421 ctgtgtgaga ggtgagggta accatagcct ggactaagaa gaggagactg ggcttctcgc
      481 tggcaaccag gtgatgggga cacagggtca cgacaaacac cctctgaacc ctgacagtga
      541 tcctctgtcc tgaccctgcc tgaccaagcc atgtcccagc aagcctcagt gggcaggggg
      601 ctgcccccag atgtgctggc agagcaggtg gagctatggt ggtcccagca gccccgtcgc
      661 tccttgctct gtttctccgt ggccgtgatc cttgtggctg gctgtggggc cggtggtgtg
      721 gcgctgctgt cctccaccag cagccgatcc ggcgaatggc gactagccgt gggcactgtg
      781 ctctgtctgc tggccctgct ggttctggtg aagcagctga tgagctctgc cgtgcaggat
      841 atgaactgca tacgccaggc ccagcacgtg gccttgctgc gcagcggcgg aggcgccgac
      901 gctgttgtag tgttgctcag tggctttgtg ctgctggtca ctggcctgac cctggctggg
      961 ctggctgctg ccccggcccc ggcacggcca ctggctgcca tgctgtctgt gggcattacc
     1021 ttggcttcct tgggctcagt cttgctgctg gggttgctac tgtaccaggt gggtgtgagt
     1081 ggacactgcc ctccgatctg tacagaggca ttctccgccc aaaatggcca cggtgataac
     1141 agtagcatct ttagcatctc aggacagttg tcttctggcc agcgtcatga gaccacctcc
     1201 agcattgcca gcctcatctg acagagatgg agcccttctt cccatgccct gcctcagtat
     1261 ccccagaact tgtggcagac attcacaggt gcacgcatat atgtgtgtcg cccccacccc
     1321 cgccatggca tttcatgata tgtgattagg agctcgtgtg caccctcata tccattccat
     1381 gagaaggtga gggatacctc cttggggctg tttgtatcat ggactgtcat gctctatgcc
     1441 tggtcctggg gtctctagag gatactcatc tggagtctct gaagacttga cccatatttc
     1501 caagacccta caactccagc cttgccctat gacatcatca aggatctcca cagaggtgac
     1561 tgttgcctat ccacaacgac actagtgatc actcttcaga gagtgactct cgggaaaact
     1621 gagagaaatg gcttccggat gagatggacc tgactgggga aacacctttg agcttgtaac
     1681 ctagcagctg gggccagtga gaggtgactc agacactcct gcctcagttt cttagaacag
     1741 tgttgctatt gatgcttaag aataattgcc tcttgggcaa gatgattggg ctcctggcaa
     1801 atgttcaatt aaaaagtgac tatagtgaaa atgaaataaa ttatggggga aaggtggctg
     1861 taaaaaaaaa aaaaaaaaa
//
