LOCUS       NM_026211               1463 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Mus musculus transmembrane p24 trafficking protein 9 (Tmed9), mRNA.
ACCESSION   NM_026211
VERSION     NM_026211.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1463)
  AUTHORS   Liu,L., Fujino,K. and Nishimura,M.
  TITLE     Pre-synaptic localization of the gamma-secretase-inhibiting protein
            p24alpha2 in the mammalian brain
  JOURNAL   J Neurochem 133 (3), 422-431 (2015)
   PUBMED   25438880
REFERENCE   2  (bases 1 to 1463)
  AUTHORS   Jerome-Majewska,L.A., Achkar,T., Luo,L., Lupu,F. and Lacy,E.
  TITLE     The trafficking protein Tmed2/p24beta(1) is required for
            morphogenesis of the mouse embryo and placenta
  JOURNAL   Dev Biol 341 (1), 154-166 (2010)
   PUBMED   20178780
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY334399.1, AK010259.1 and CF382327.1.
            
            On Apr 27, 2007 this sequence version replaced NM_026211.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK152496.1, AK153383.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-27                BY334399.1         2-28
            28-1430             AK010259.1         2-1404
            1431-1463           CF382327.1         200-232
FEATURES             Location/Qualifiers
     source          1..1463
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 30.06 cM"
     gene            1..1463
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /note="transmembrane p24 trafficking protein 9"
                     /db_xref="GeneID:67511"
                     /db_xref="MGI:MGI:1914761"
     exon            1..223
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..747
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /note="transmembrane emp24 domain-containing protein 9;
                     glycoprotein 25L2; p24alpha2; p24 family protein alpha-2;
                     transmembrane emp24 protein transport domain containing 9"
                     /codon_start=1
                     /product="transmembrane emp24 domain-containing protein 9
                     precursor"
                     /protein_id="NP_080487.2"
                     /db_xref="CCDS:CCDS49277.1"
                     /db_xref="GeneID:67511"
                     /db_xref="MGI:MGI:1914761"
                     /translation="MAAVRGVRVVGSSPGLLLGRGMRAFLLLLWLAARGSALYFHIGE
                     TEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGLGMFVEVKDPEDKVILARQY
                     GSEGRFTFTSHTPGEHQICLHSNSTKFSLFAGGMLRVHLDIQVGEHANDYAEIAAKDK
                     LSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQTLILVAIG
                     VWQMRHLKSFFEAKKLV"
     exon            224..324
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            325..450
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            451..597
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            598..1454
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1435..1440
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /note="hexamer: AAGAAA"
     polyA_site      1454
                     /gene="Tmed9"
                     /gene_synonym="2400003B06Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggctcggcag tctgcgcctg cgcaggcagg tggggcaaga tggctgcggt gcgaggcgtg
       61 cgggttgtcg gaagctcacc gggtctcttg ctggggagag ggatgcgggc cttcctgcta
      121 ctgctgtggc ttgcagcccg cggaagcgcg ctgtatttcc acatcggaga aacagaaaag
      181 aagtgcttca ttgaggagat tccggacgag accatggtca tcggaaatta ccggacgcag
      241 ctgtatgaca aacagcggga ggagtaccag ccagccaccc ctgggcttgg catgttcgta
      301 gaggtaaaag accccgagga caaggtcatc ctggcccggc agtatggctc tgagggcagg
      361 ttcaccttca cctcccacac ccctggtgag caccagatct gtcttcactc aaattccacc
      421 aagttctccc tctttgccgg agggatgctg agggttcacc ttgacatcca agtgggcgaa
      481 catgcaaacg actatgcaga aattgctgcc aaggacaagc tgagcgagct gcagctgagg
      541 gtgcgacagc tggtggagca agtggagcag atccaaaagg agcagaacta ccagcggtgg
      601 cgagaagagc gcttcagaca aaccagcgaa agcaccaacc agcgagtgct atggtggtcc
      661 atcctgcaga ctctcatcct cgtggccatt ggcgtctggc agatgcggca cctcaagagc
      721 ttttttgaag ccaagaagtt ggtgtagcag ctgtcccaag cctcacaggc gatctttctt
      781 ccaggctgtg ggaagtagga ggaggactgg ttttcagccg cagatgttct ggaggagaga
      841 gggactgtaa gcgtgtcccc gttcctcagg ctcaggtgga ggacagcagc ctggctggct
      901 aatgctgagc cagtagtggg acaagccctc ccacctccac tcctggacct tttgcagtaa
      961 tcactcaggg gctggcgatg cccttggtgt ctcagaatct cagtgttact gatcagggat
     1021 atgaggttgc tgtctggggt aggttttggg agggaagtgg gtggggcagc aagctgattt
     1081 tccttctgtc ttcctttgtt aatgtgggat tttgagcagg tcagggtgta tcagtgactc
     1141 cttgctattc cagaaacttt gcttttcttg cctttggctt agaaccagcc tgcttatata
     1201 gggtgtgttt gctgcgtgtc agtttaaggg tgtggagggg ttgcagtgca caaaaggggc
     1261 ccagaggttg attttagttt gttacaattg tcctttctgg ggcttgaaca actggtatca
     1321 aaccaagcag agactttggt gctggttgga aacagagcct acagagtctt agttactgag
     1381 tttattttca atgaatgtgg gtttgttaca ttggtttccc aataaaaaag aaaaaagaaa
     1441 aaaaggaaga aaaaaaaaaa aaa
//
