LOCUS       XM_030241970            1585 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus transmembrane 6 superfamily member 1
            (Tm6sf1), transcript variant X3, mRNA.
ACCESSION   XM_030241970
VERSION     XM_030241970.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..1585
                     /gene="Tm6sf1"
                     /gene_synonym="C630016D09Rik"
                     /note="transmembrane 6 superfamily member 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 5 ESTs, 666 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 24 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:107769"
                     /db_xref="MGI:MGI:1933209"
     CDS             249..917
                     /gene="Tm6sf1"
                     /gene_synonym="C630016D09Rik"
                     /codon_start=1
                     /product="transmembrane 6 superfamily member 1 isoform X3"
                     /protein_id="XP_030097830.1"
                     /db_xref="GeneID:107769"
                     /db_xref="MGI:MGI:1933209"
                     /translation="MSIVVFVPGNIVGKYGTRICPAFFLSIPYTCLPVWAGFRIYNQP
                     SENYNYPSKVLQEAQAKALLRRPFDLVLVLCLFLATGFCLFRGLIALDCPAELCRLYT
                     QFQEPYLKDPAAYPKIQMLAYMFYSVPYFVIALYGLVVPGCSWMPDITLVHAGGLAQA
                     QFSHIGASLHARTAYVYRVPEEAKIFFLALNIAYGVLPQLLAYRCTYNPEFFLRTKAD
                     EKLE"
ORIGIN      
        1 ttcctggacc attgttgggg ttgctgccct catcctgctc ctggtggccc ttttggcccg
       61 ggtccttgtc agaagaaaac caccgaggga ccctctgttc tacgtgtatg cagtgtttgg
      121 atttaccagt gtggtgaacc ttatcatagg cttggagcaa gatggcatca ttgatggatt
      181 catgacgcac tacttgagag agggaaagct acagaaccat tggcctatac tgggtcggat
      241 ccattataat gagcatcgtg gtttttgtgc ctggaaacat cgtaggaaag tatgggacac
      301 ggatttgccc tgcatttttc ttaagcatac catatacatg tcttccggtc tgggctggct
      361 tcagaatcta taatcaacca tcagaaaact ataattatcc ctcaaaggtt cttcaagaag
      421 cccaagcaaa ggccctgctg agaagaccgt ttgacttagt gttggttttg tgtcttttct
      481 tggcaactgg attttgcctg ttcagaggct tgattgcttt ggattgccca gctgagctct
      541 gccgactcta cacgcagttt caagagccct acctaaagga ccctgctgct tatcctaaga
      601 ttcagatgct ggcatacatg ttctattccg tcccttactt tgtgattgcc ctttatggct
      661 tagtggtccc tggatgctca tggatgcctg atataacgct ggtccatgct ggaggtctag
      721 ctcaggctca gttttctcac attggtgcgt cccttcatgc tagaactgct tatgtctaca
      781 gagtccccga agaagcgaaa atcttttttc tagcactaaa catagcatat ggagttcttc
      841 ctcagctctt ggcctaccgt tgtacctaca atcccgagtt cttcctaaga actaaggcag
      901 atgagaagtt ggaataaaca aacatacctc acagttctct ctgacctgtt aatgggactg
      961 gcgctctcct ttatcccctc catacaggaa tactcacaag aacacacttg ttctgcagca
     1021 tacatgtgag tgaaactaag ggtagtatct gggtatattc tcagttttga aagaaaatta
     1081 aagttgagaa acagcttttt taaggaaata tatcaccatt tgtctatgaa tgtgaccatt
     1141 gattttagca ttgtttgcac atagtatgtg tgaaaattac aactctagtg cctacaaaaa
     1201 gcataaaaat gaaactattc agaagtaact aaccatacta tgcataagaa ataattcaaa
     1261 acagcaattg caggttggag aaatggcttc atatgaaatg tatgagttgt tgacaatctt
     1321 aatataaatg ccagatcatc acaatatttt taaattgatt caagtgtttt cacaaggaaa
     1381 gcatattatt tattgccatt ttaaaaattg ctgtcaaaac ttctattgtg aatttgaata
     1441 gctaagatga cacaaatcaa ctttattagt tgccttaatg aacacttgtt ttattggttg
     1501 ataatatttc tcttgtgttt ctgtgtatac cttcaatact gtgtatacct tcaataaaat
     1561 tatttttggt gtttatgaag ataaa
//
