LOCUS       XM_011240720            3094 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus toll-like receptor 1 (Tlr1), transcript
            variant X1, mRNA.
ACCESSION   XM_011240720
VERSION     XM_011240720.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000071.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011240720.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3094
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="5"
     gene            1..3094
                     /gene="Tlr1"
                     /note="toll-like receptor 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 5 ESTs, 41 long SRA reads, 70 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 7 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:21897"
                     /db_xref="MGI:MGI:1341295"
     CDS             544..2931
                     /gene="Tlr1"
                     /codon_start=1
                     /product="toll-like receptor 1 isoform X1"
                     /protein_id="XP_011239022.1"
                     /db_xref="GeneID:21897"
                     /db_xref="MGI:MGI:1341295"
                     /translation="MTKPNSLIFYCIIVLGLTLMKIQLSEECELIIKRPNANLTRVPK
                     DLPLQTTTLDLSQNNISELQTSDILSLSKLRVLIMSYNRLQYLNISVFKFNTELEYLD
                     LSHNELKVILCHPTVSLKHLDLSFNAFDALPICKEFGNMSQLQFLGLSGSRVQSSSVQ
                     LIAHLNISKVLLVLGDAYGEKEDPESLRHVSTETLHIVFPSKREFRFLLDVSVSTTIG
                     LELSNIKCVLEDQGCSYFLRALSKLGKNLKLSNLTLNNVETTWNSFINILQIVWHTPV
                     KYFSISNVKLQGQLAFRMFNYSDTSLKALSIHQVVTDVFSFPQSYIYSIFANMNIQNF
                     TMSGTHMVHMLCPSQVSPFLHVDFTDNLLTDMVFKDCRNLVRLKTLSLQKNQLKNLEN
                     IILTSAKMTSLQKLDISQNSLRYSDGGIPCAWTQSLLVLNLSSNMLTGSVFRCLPPKV
                     KVLDLHNNRIMSIPKDVTHLQALQELNVASNSLTDLPGCGAFSSLSVLVIDHNSVSHP
                     SEDFFQSCQNIRSLTAGNNPFQCTCELRDFVKNIGWVAREVVEGWPDSYRCDYPESSR
                     GTALRDFHMSPLSCDTVLLTVTIGATMLVLAVTGAFLCLYFDLPWYVRMLCQWTQTRH
                     RARHIPLEELQRNLQFHAFVSYSGHDSAWVKNELLPNLEKDDIQICLHERNFVPGKSI
                     VENIINFIEKSYKSIFVLSPHFIQSEWCHYELYFAHHNLFHEGSDNLILILLAPIPQY
                     SIPTNYHKLKTLMSRRTYLEWPTEKNKHGLFWANLRASINVKLVNQAEGTCYTQQ"
ORIGIN      
        1 ctgccggacg ggtaaggttg tcttggtgtt tttgattttt ggacacggtt gttttgattt
       61 ttaaatgacc ttcccaacca tcctcctctc cgtgaaatgt tcatgaagac ggaacacgtt
      121 gtgacccaca tacacttgag tgtgtttact aagagcccac gtgttggata ccttctctga
      181 ggcatgaaga gagcggaagc tcaggctgac catggcattt gggggtggtc cttttcgagg
      241 aaactaggat tggattccat cagatcacca gagtagctag cttcatcgaa gcagagatgc
      301 aaccggaagg catacacgtg tccccatctc tcgccggatg ctgcgctggg attctgctct
      361 cagggtcatc gcaggatgtg actgacccct tgtcggtaga gcagaactag tgtttgtgaa
      421 tgcagttggt gaagaactca ggcgagcaga ggcaattgtg gacaccccta cagaaacgtc
      481 ctatacccat gtggcaatgc tctgaagaat agcagggacc tcaggaatgt ctatggccat
      541 acaatgacta aaccaaattc cctcatcttc tactgtatca ttgttttagg actgacactt
      601 atgaaaatcc aattatctga ggaatgtgag cttatcataa agaggccaaa cgcaaacctt
      661 accagagtgc ccaaggacct acccttgcaa acaactactt tagatctatc acaaaacaat
      721 atatctgagc ttcagacttc tgacatcctc tcattgtcca agctgagggt cctgataatg
      781 tcctacaaca gactccagta tcttaatatc agtgttttca aattcaacac agagctggaa
      841 tatttggatt tgtcccacaa tgagctaaag gtgatcttgt gccacccaac agtcagcctc
      901 aagcatttgg acctctcctt taatgccttt gatgccctgc ctatatgcaa agaatttggc
      961 aacatgtccc aactacagtt cctggggttg agcggttctc gggtacaaag ttcaagtgtg
     1021 cagctgattg ctcatttgaa catcagtaag gttttgctgg tgttaggaga tgcttatggg
     1081 gaaaaagaag accccgaatc tcttcggcac gttagcactg agactctgca tattgttttc
     1141 ccgtcgaaaa gagaattccg ttttcttctg gatgtgtccg tcagcactac gatcggtttg
     1201 gaactgtcta acatcaagtg tgtgcttgaa gaccagggct gctcttattt cttacgtgct
     1261 ttgtcaaagc ttggaaagaa tctgaagctc tcaaatctta ccctgaacaa tgtggaaaca
     1321 acgtggaatt ccttcattaa tatcctccag atagtttggc atacgccagt caaatatttc
     1381 tcaatttcaa atgtgaagct acaaggtcaa cttgccttca ggatgttcaa ttattctgac
     1441 acttctctga aggctttgtc gatacatcaa gttgtcactg atgtcttcag cttcccccaa
     1501 agttacatat acagtatctt tgccaatatg aacatccaaa actttacaat gtctggaaca
     1561 cacatggtcc acatgctgtg cccgtcccaa gttagcccat ttctgcatgt ggactttaca
     1621 gataaccttt taacagacat ggtttttaaa gactgtagaa acttagttag attgaaaaca
     1681 cttagtttac aaaagaatca gttaaaaaac cttgagaata taatcctcac atctgcaaag
     1741 atgacatccc tacaaaaact agacattagc cagaattctc taaggtacag cgatggggga
     1801 atcccatgcg cctggaccca gagtttgtta gttttaaatt tgtcttcgaa tatgcttaca
     1861 ggctctgtct tcagatgctt acctcccaaa gtcaaggtcc ttgaccttca caacaacagg
     1921 ataatgagca tccctaaaga tgtcacccac ctgcaggctt tgcaggaact caatgtagca
     1981 tccaactcct taactgacct tcctgggtgc ggggccttca gcagcctttc tgtgctggtc
     2041 atcgaccata actcagtttc ccatccctct gaggatttct tccagagctg tcagaatatt
     2101 agatccctaa cagcgggaaa caacccattc caatgcacat gtgagctgag ggactttgtc
     2161 aagaacatag gctgggtagc aagagaagtg gtggagggct ggcctgactc ttacaggtgt
     2221 gactacccag aaagctctag gggaactgca ctgagggact tccacatgtc tccactatcc
     2281 tgtgatactg ttctgctgac tgtcaccatc ggggccacta tgctggtgct ggctgtcact
     2341 ggggctttcc tctgtctcta ctttgacctg ccctggtatg tgaggatgct gtgtcagtgg
     2401 acacagacca ggcacagggc caggcacatc cccttagagg aactccagag aaacctccag
     2461 ttccatgctt ttgtctcata cagtgggcat gattctgcct gggtgaagaa cgaattacta
     2521 cccaacctag agaaagatga catccagatt tgcctccatg agaggaactt tgtccctggc
     2581 aagagcattg tggagaacat catcaatttc attgagaaga gttacaagtc catctttgtg
     2641 ctgtctcccc acttcatcca gagtgagtgg tgtcattatg aactctattt tgcccatcac
     2701 aatctcttcc atgaaggctc tgataactta atcctcatct tgctggcacc cattccccag
     2761 tactccatcc ctaccaatta ccacaagctc aaaactctca tgtcacgaag gacctatctg
     2821 gaatggccca cagagaagaa caagcatgga cttttttggg caaacctaag agcatccatt
     2881 aatgttaagc tggttaacca ggcagaagga acgtgttaca cacagcaata agaatatcca
     2941 cctcaatgat gttgctgctc tggggagttc taataatagt accattcata tcagcaagaa
     3001 cctaaaaatg gttctgactt tacaatgtgg gaatttgtgc tttttagccc aagtttaccg
     3061 ctagtgtttt ctaataaaaa ttagtgggat acta
//
