LOCUS       NM_001163357            1026 bp    mRNA    linear   ROD 23-AUG-2023
DEFINITION  Mus musculus T cell immunoglobulin and mucin domain containing 5
            (Timd5), mRNA.
ACCESSION   NM_001163357 XM_109910 XM_908317
VERSION     NM_001163357.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1026)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1026)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AL669948.8.
            
            On or before Jul 18, 2009 this sequence version replaced
            XM_908317.2, XM_109910.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN00849374, SAMN01164131
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-113               AL669948.8         100141-100253
            114-171             AL669948.8         102138-102195
            172-510             AL669948.8         104298-104636
            511-560             AL669948.8         109021-109070
            561-669             AL669948.8         111396-111504
            670-703             AL669948.8         112299-112332
            704-1026            AL669948.8         113724-114046
FEATURES             Location/Qualifiers
     source          1..1026
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 27.98 cM"
     gene            1..1026
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /note="T cell immunoglobulin and mucin domain containing
                     5"
                     /db_xref="GeneID:210535"
                     /db_xref="MGI:MGI:3650838"
     exon            1..113
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /inference="alignment:Splign:2.1.0"
     exon            114..171
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /inference="alignment:Splign:2.1.0"
     exon            172..510
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /inference="alignment:Splign:2.1.0"
     exon            511..560
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /inference="alignment:Splign:2.1.0"
     exon            561..669
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /inference="alignment:Splign:2.1.0"
     exon            670..703
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /inference="alignment:Splign:2.1.0"
     exon            704..1026
                     /gene="Timd5"
                     /gene_synonym="Gm12169"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggagataag ggtggaagac ttgtcttcat ccatgaagag ctttggaaga gttcagcagc
       61 agcagaggac ctgaaggaga gactaacaag aagttacttt ccctcaagta caggtcacca
      121 ccatgatgtc ccatcaagtc ctcatttcag gcctcctact cctcctccca gctgctgtgc
      181 atgctttccc agaagttcat ggagtggtgg gtcagcctgt cacacttcca tgtacctatc
      241 cggtgtctaa tggcttagca tccatgtgct ggggccgagg tgaatgcaca tctgatacat
      301 gtggacaaac actggtctgg actgatggaa accgagtcaa ctatcagaca agcaaccgct
      361 accagataaa ctcgcagctt cttcaaggaa atgcgtcctt gacaatcgag gacgcctatg
      421 agagcgacag tggtctctac tgctgtcgag tggaaatgaa gggatgggat ggcgtgcaga
      481 cactgaccac ctcactgcag gttcaaccag tttggattgc gactgtgacg tcttcaaacc
      541 acccttggaa taataatact gaagtggttc ctacagaaac tcccctgaag atccccatta
      601 gaggcctctt cattggaatc tctgtgtctg cctcactgct gatccttgcg agcatcccaa
      661 ccatcatacg gtgcagacac agagaaaaga agagtccaga aggcaactct gagtgcagct
      721 cagttttctt ccatgcttat cagaatggcg cctttcaaag tatagtgcaa cttcaagccg
      781 aagatataat ctacgttatt gaagacaatt ttcatccaag gattaaatcc cagttgccct
      841 ttgagatgac aacattccaa agctgcagga agtaatggac tgtaactgtg atgggcattc
      901 actaagctgc aaggctgttt tcttggtcag ttcatctcat gttcctactt cccagcagta
      961 ggggagagca tgaccttata gttgttcata tgcatagtga ctgttaatat agtattcatt
     1021 ctcacc
//
