LOCUS       XM_006522983            5991 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus T cell lymphoma invasion and metastasis 1
            (Tiam1), transcript variant X9, mRNA.
ACCESSION   XM_006522983
VERSION     XM_006522983.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006522983.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5991
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..5991
                     /gene="Tiam1"
                     /gene_synonym="D16Ium10; D16Ium10e"
                     /note="T cell lymphoma invasion and metastasis 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 mRNAs, 38 ESTs, 388 long SRA reads, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:21844"
                     /db_xref="MGI:MGI:103306"
     CDS             84..3980
                     /gene="Tiam1"
                     /gene_synonym="D16Ium10; D16Ium10e"
                     /codon_start=1
                     /product="rho guanine nucleotide exchange factor TIAM1
                     isoform X2"
                     /protein_id="XP_006523046.1"
                     /db_xref="GeneID:21844"
                     /db_xref="MGI:MGI:103306"
                     /translation="MGLCHLIISGRAGMVGCRRSELISTLQQDVNTGEGSEFADSGIE
                     GATTDTDLLSRRSNATNSSYSPPTGRAFVGSDSGSSSTGDAARQGVYENFRRELEMST
                     TNSESLEEAGSAHSDEQSSGTLSSPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKK
                     VESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVPEHPKK
                     DFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAAVARHHHKEDTLRLLKSEIKK
                     LEQKIDMDEKMKKMGEMQLSSVTDSKKKKTILDQIFVWEQNLEQFQMDLFRFRCYLAS
                     LQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSSFHALVAARTGEIGVRRRTQAMSRS
                     ASKRRSRFSSLWGLDTTSKKKQGRPTINQVFGEGTDAVKRSLEGIFDDTVPDGKREKE
                     VVLPSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVVRPGDTARDTLELICKTHQLD
                     HSAHYLRLKFLMENRVQFYIPQPEEDIYELLYKEIEICPKVTQNIHIEKSDAAADNYG
                     FLLSSVDEDGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAAGTLNSSMLKDFLSQ
                     PSLGLLVRTYPEPEGGVELLENPPHRVDGPVDLGESPLAFLTSNPGHSLSSEQGSSAE
                     TAPEEGEGPDLESSDETDHSSKSTEQVAAFCRSLHEMSPSDSSPSPQDATSPQLATTR
                     QLSDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKETFLTQDELDVLFGNLTEM
                     VEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKVLFSLGGSFLYYADRFKLYSAFCASH
                     TKVPKVLVKAKTDTAFKAFLDAQNPRQQHSSTLESYLIKPIQRVLKYPLLLRELFALT
                     DAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAVFDQLIAEQTGEKKEVADLSMG
                     DLLLHTSVIWLNPPASLGKWKKEPELAAFVFKTAVVLVYKDGSKQKKKLVGSHRLSIY
                     EEWDPFRFRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPE
                     SRKDFLKSVHSILRDKHRRQLLKTESLPSAQQYVPFGGKRLCALKGARPAMSRAVSAP
                     SKSLGRRRRRLARNRFTIDSDAISASSPEKEPQQPAGGGDTDRWVEEQFDLAQYEEQD
                     DIKETDILSDDDEFCESLKGASVDRDLQEQLQAASISQRARGRRTLDSHASRMTQLKK
                     QAALSGINGGLESASEEVIWVRREDFAPSRKLNTEI"
ORIGIN      
        1 ggtgtgctag gaatggcaat agagctatta agttcatact gggagactgc ctctcaactc
       61 agtccctcca caacacctcc ctgatgggac tctgtcacct aatcatctct ggacgagcag
      121 gcatggtggg ttgcaggcgc tcggagctca tatccacact gcagcaggat gttaacacag
      181 gcgagggcag cgagtttgcg gacagtggga tcgaaggggc caccaccgac acggacctct
      241 tgtccaggag atccaatgcc accaactcaa gctactcgcc ccccacaggc cgagcctttg
      301 tgggcagcga cagcggcagc agttcaacag gggatgctgc gcgccagggg gtgtacgaga
      361 acttcaggcg ggaactggag atgagtacca ccaacagtga gagcctggag gaggctggct
      421 ctgcgcacag cgatgagcag agcagcggaa ccctcagttc cccgggccag tcggacatcc
      481 tgctaacggc tgcgcagggc actgtgcgga aggctggagc gctggcagtc aagaacttcc
      541 tggtccacaa gaagaataag aaggtggagt cggctacccg gaggaagtgg aagcactact
      601 gggtgtccct gaaaggttgc acgctctttt tctatgagac tgatggcagg tctgggatag
      661 accacaacag tgtccccaag cacgccgtct gggtggagaa cagcatcgtg caggctgtgc
      721 ctgagcaccc caagaaagac ttcgtcttct gcctcagcaa ctccctgggt gacgccttcc
      781 tcttccagac cacgagccag acagagctgg agaactggat caccgccatc cactctgcct
      841 gcgcagctgc cgtcgcaagg caccaccaca aggaggacac gctccgcctc ctcaagtcgg
      901 aaatcaagaa gctggagcag aagatcgaca tggacgagaa gatgaagaag atgggggaga
      961 tgcagctgtc ttccgtcacc gactcgaaga agaagaagac catcctagac cagatcttcg
     1021 tttgggagca gaacctcgaa cagttccaga tggacctgtt ccgattccgc tgttacctcg
     1081 ccagcctcca gggcggggag ctgccaaacc ccaaaaggct gcttgctttt gcgagccggc
     1141 ccacgaaggt ggccatgggc cgcctcggga tcttctccgt gtcatctttt catgccctgg
     1201 tggcagcccg gactggtgag atcggagtga gaaggcgtac tcaggccatg tccaggtctg
     1261 caagcaagcg aaggagcagg ttttcttctc tctggggcct agacactacc tccaaaaaga
     1321 agcagggacg cccaaccatc aaccaggtgt ttggagaggg gactgatgct gtaaagagat
     1381 ctttagaggg aatatttgat gacactgttc cagatggcaa gagggagaag gaagtggtct
     1441 tacccagtgt ccaccagcac aaccccgact gtgacatttg ggtccatgaa tatttcactc
     1501 catcctggtt ctgtctaccc aacaaccagc cagccttgac ggttgtccgg ccaggggaca
     1561 ctgcgaggga caccttggag ctcatttgca agacacatca actggatcat tccgcccatt
     1621 acctgcgcct gaaattccta atggagaaca gagtgcagtt ctacatcccg cagcccgagg
     1681 aggacattta cgagctgctt tacaaagaaa ttgaaatctg tccaaaagtc acccagaata
     1741 tccacattga gaagtcagac gcggccgctg ataattacgg gtttttgctt tcttctgtgg
     1801 atgaagatgg cattcgaagg ctctacgtga acagtgtcaa ggaaaccggg ttagcttcca
     1861 agaaaggcct gaaggcgggg gatgagattc tcgagatcaa taatcgtgct gctggtaccc
     1921 tgaactcatc tatgctcaaa gatttcctct cacagccctc cctgggcctc ctggtgagga
     1981 cctaccctga gccagaggga ggcgtggagc tgctggagaa ccctccgcac cgagtggacg
     2041 gccctgtgga ccttggcgag agccccctcg ccttcctcac cagcaaccca gggcacagcc
     2101 tctccagtga gcagggcagc agtgctgaga cagctccaga agagggcgaa ggaccggact
     2161 tggagtcttc tgatgagaca gatcacagca gcaagagcac agaacaggtt gcagcgtttt
     2221 gccggagtct gcacgagatg agcccctctg actcaagccc gtcccctcag gatgccacaa
     2281 gccctcagct ggcaaccaca cgacagctgt cggatgcgga taagctgcgc aaggtgatct
     2341 gtgaactgct ggagactgaa cgcacctatg tgaaagactt aaactgcctc atggagagat
     2401 acctgaagcc ccttcagaag gagacctttc tcacccagga tgagcttgat gtactttttg
     2461 gaaatttaac cgaaatggtg gagtttcaag tcgagttcct taagactcta gaagatggag
     2521 taagactggt ccctgacttg gaaaagctgg agaaggttga ccagttcaag aaagtgctct
     2581 tctctctggg gggatccttc ctgtactacg cggaccgctt caagctctac agtgccttct
     2641 gtgcgagcca cacaaaagtc cccaaggtcc tggtgaaagc caagacggac acagccttca
     2701 aggcgttcct cgatgcccag aacccgaggc agcagcactc atccacgctg gagtcttacc
     2761 tcatcaagcc catccagagg gtcctcaagt acccgcttct gctcagggag ctgtttgcgc
     2821 tgaccgatgc ggagagcgag gaacactacc acctggacgt ggccatcaag actatgaaca
     2881 aggtcgccag tcacatcaat gagatgcaga agatccacga agagtttggt gctgtgtttg
     2941 accagctgat tgctgagcag acgggagaga agaaagaggt tgcagatctg agcatgggtg
     3001 acctgctctt gcacaccagc gtcatctggc tgaacccacc cgcctcactg ggaaagtgga
     3061 aaaaggagcc agaattagca gccttcgtct tcaaaacggc cgtggtcctt gtatataaag
     3121 acggttccaa gcagaagaag aaacttgttg gctctcacag gctgtcaatc tacgaggagt
     3181 gggacccttt ccggtttcgc cacatgatcc ctaccgaagc tttgcaggtc cgagctctgc
     3241 ccagtgcaga tgcagaggca aatgcggtat gcgaaattgt ccacgtgaaa tcagagtcag
     3301 aagggaggcc cgagcgggtt ttccacctct gctgcagttc cccagagagc agaaaggact
     3361 ttctgaagtc tgtgcattcg atcctgcgag ataaacacag aagacagctc ctcaaaacgg
     3421 aaagccttcc gtcagcccag cagtatgtcc cctttggagg caagagattg tgtgcgctta
     3481 aaggcgccag gccggccatg agcagggcag tgtctgcccc aagcaagtct cttgggagga
     3541 ggaggcggcg actggcccga aacaggttta ccatcgattc agacgccatc tcagccagca
     3601 gcccggagaa agagccccag cagcccgccg gtggtgggga cactgaccga tgggtagagg
     3661 aacagttcga tcttgctcag tacgaggagc aggatgacat caaggagaca gacatcctca
     3721 gtgacgatga cgaattctgt gagtccctga agggcgcctc agtggacaga gaccttcagg
     3781 agcagcttca ggctgcctcc atcagtcagc gggcccgagg ccggagaacc ctcgatagcc
     3841 acgcctcccg catgacacag ctcaagaagc aagcggccct ctcgggcatc aacgggggcc
     3901 tggagagtgc gagcgaggaa gtcatttggg tcaggcgcga agactttgcc ccctccagga
     3961 aactgaacac ggagatatga cttccttgtc cctgtagaga atatgtgtgt agatatgatg
     4021 ccggccccac cctcactccg cccaccctcc tgtgccgtcc acgagaatgt ccccttaggt
     4081 cgcactcttg acacagattt tggcagctga cttgggtctg aagccatgta gccacccacc
     4141 ttcatcattc ttaatgacac cagagagaat cgttcagaat cccagacaaa caagcttgag
     4201 tcctttcctc tgtgccaagg gctttctttt atttattctc aattcatcgg ggcctgaaga
     4261 tttagaacga agaaccgata gcgctagaaa tcaaaccgtc cccaccccag cagtcaaaac
     4321 agggacagga cggtgtgcac agattgtccc agctccacct ctctaaatcc agtctcgcag
     4381 ctgaggaaca accaccttca aacacacata gagaaacgga acagatggaa acacctgtac
     4441 agcgtgcagt gttctgactc ctcccctctt cagcgtccga gaatatctgt gtatcttaag
     4501 aatgtgtgag gaaagggtgg tcgtctctgt acgatgagcc tttattctta tttttttttt
     4561 cttctgttca tgtctatagc tggtcttact ctgtgtcagt gtctggaagc tctagttttg
     4621 cagagaatta taaagatgcc aaactcttgg aaaagagatc caaatttatc acttagaggg
     4681 agagagaaga aaaaaaagaa acactatttt ttgtattttc cttgagatgc aggggcacaa
     4741 atagatgaga attttacagt gttaggtgta actcagtctg aaaatgagga tataaccttt
     4801 tgcagagcaa gcggggcacg atgactttat atttatacac aaacggccaa caagaagctc
     4861 atgctaagaa taaacttttc tgagaaacag attttttttt taaatgtatg aatctatatt
     4921 tgagatggga gtttggttgg attacaggga caggaaatgg ggcagtgtgt gcgtgtgtct
     4981 gttgttcatg gtgggggagg ggagcctcct catggggttg ccatggcaat cattggtttt
     5041 cccatcaaac ttgcatcttc atccacagat gacctcccct tccctgagag tccacggcag
     5101 aatcttagaa cctcttcaga gacgtccttt gtggttaata tttcctccat gccaatgaga
     5161 cagggtaaac tcgctacggg gcctaacctt ctaaatggat gtccagacag gaagaacaaa
     5221 acccattcta gcactttcat ttttaaaaaa aaaaaggttt atagcttttt gttccgccct
     5281 cctcctcccc atttcacaat gtccattcct taagaagggt ttaaataata tgaaaacttt
     5341 gtttttggaa ataaaaaaat atctatatat ctatatatct atatatctat ttggtgtttg
     5401 atacatcggt aggtacttta aagacctgaa ttttatagta gctttagcaa ttatatttta
     5461 taagaatcag ttatgacttt atatttccag atagagagtt cagaacacca tgctctaaag
     5521 cctcccccac cccggcttgc tttcctgctt tcctgacctc tctccccccc ccccctttcg
     5581 ggtttccagg gctttgagct tgatcttttg aaagttttat tctattacag tttttgctat
     5641 taccttctgg ttttcttaag aagctttaga gtggtttcta tgccctttgt accactgcac
     5701 tgttcgtaac atctcggggt cgattgcgtc cggatgggaa actgaagcag aggtgtcgga
     5761 tagtcacatt ttctggtctc cctgcaacac gtccatcgga aaaaaaaata ctggaaagtc
     5821 tggtgcttag agagggtgcc attgtctctt gtatatacgg tcatgatgtg tctatgtcaa
     5881 aagttcttat atatttcttt tataagctga aagaaggtct atttttatgt ttttaggtct
     5941 atgaatggaa cgttgtaaat gcctgtccaa caataaaagt actgaaaagg g
//
