LOCUS       XM_036152890            1989 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Tia1 cytotoxic granule-associated RNA
            binding protein-like 1 (Tial1), transcript variant X17, mRNA.
ACCESSION   XM_036152890
VERSION     XM_036152890.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..1989
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /note="Tia1 cytotoxic granule-associated RNA binding
                     protein-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 53 ESTs, 1004
                     long SRA reads, 2 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     42 samples with support for all annotated introns"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
     CDS             680..1438
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /codon_start=1
                     /product="nucleolysin TIAR isoform X2"
                     /protein_id="XP_036008783.1"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
                     /translation="MDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ
                     IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF
                     SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
                     NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAW
                     MGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ"
ORIGIN      
        1 ctcctcctgc tcctcctggt tggagcgcag tgtccggagc gggctggggg gagcggaccc
       61 gagagcgggg ttcagtacct tttcctctgt ccccagccgg cgcccggagc ccccctcccc
      121 ttccttcccg ccccctcccc tccccagccc tgccctcccc cttgtcccgg gatcactccg
      181 tcgcacccac catgatggaa gacgacggac agccccggac tctatacgta ggtaacctct
      241 ccagagatgt gacagaagtc cttattcttc agttattcag tcagatcgga ccctgtaaaa
      301 gctgtaaaat gataacagag caacccgata gcagaagggt caactcttct gttggatttt
      361 ctgttttgca gcatacaagc aatgacccat attgctttgt ggaattttat gaacacagag
      421 atgcagctgc tgcattagct gctatgaatg ggagaaaaat tttgggaaag gaggtcaaag
      481 taaactgggc aacaacacca agtagccaga aaaaagatac ttccaatcac ttccatgtgt
      541 ttgttgggga tttgagtcca gaaattacaa cagaagatat caaatcagca tttgccccct
      601 ttggtaaaat atcctgccca aactccaaaa tgatgataga gaattgacca agaaaaataa
      661 agaaatctgt taacaggcca tggatgcccg ggtagttaaa gacatggcaa ctggaaagtc
      721 caaaggctat ggttttgtat ctttttataa caaactggat gcagagaatg caattgtgca
      781 tatggggggt cagtggttgg gaggtcgaca aatcagaacc aattgggcca cacgtaaacc
      841 acctgcccct aaaagtacac aagaaactaa cactaagcag ttgagatttg aagatgtagt
      901 aaaccagtca agtccaaaaa actgtactgt gtactgtgga ggaattgctt cggggctgac
      961 agatcaactt atgagacaaa cattttcacc atttggacaa attatggaaa tacgagtttt
     1021 tccagagaag ggctattcgt ttgtcagatt ttccactcac gagagtgcgg cccacgccat
     1081 tgtctctgtg aacggcacta caatcgaagg acatgtggtg aaatgctatt ggggtaaaga
     1141 atctcctgat atgactaaaa acttccaaca ggttgactac agtcagtggg gccagtggag
     1201 ccaagtgtat ggaaacccac aacagtatgg acagtatatg gcaaatgggt ggcaagtacc
     1261 accctatgga gtatatgggc agccgtggaa ccaacaagga tttggagtag atcaatcccc
     1321 ttctgctgct tggatgggtg gatttggtgc tcagcctcct caaggacaag cccctccccc
     1381 tgtaatacct cctccaaacc aagctgggta tggaatggca agcttcccga cacagtgagc
     1441 tgggactcga aacacgattg taattcacca caggctgcag tctcctgtca cactctgaag
     1501 acatgaaaag taaacatcgg aaaatgaaaa tatttatttt aaaaattgaa atgtttggaa
     1561 cctttagcac agctttgctt ggtgaaggac acatgtcttc tagttctgcc tttttaagtt
     1621 tttgttcatg atggatatga acatgatttt tctttgtgta caaaaaacta aaataaagtc
     1681 aataaagaca attctgacta taaattttga tataatagga gaaatgggta atacacttcg
     1741 atccttagac actattccat ttttatcttg ctgttcagta ttttaactca ctgtgttttt
     1801 aaaagagcaa aaaagggagt atcgtgaaaa actgagaatc acatcagttc gtcctgaatc
     1861 ctgatactcc cctcccgtcc ctgaggcgga ccacatagaa ggcagcagga gaaagtgtga
     1921 tttcagaaga agtccatgat gtgggagtcg ctgtggaaga aatatgttat tctcttatgt
     1981 taaagaaaa
//
