LOCUS       XM_030242354            3398 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Tia1 cytotoxic granule-associated RNA
            binding protein-like 1 (Tial1), transcript variant X16, mRNA.
ACCESSION   XM_030242354
VERSION     XM_030242354.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242354.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3398
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..3398
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /note="Tia1 cytotoxic granule-associated RNA binding
                     protein-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 53 ESTs, 1070
                     long SRA reads, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     45 samples with support for all annotated introns"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
     CDS             2381..3139
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /codon_start=1
                     /product="nucleolysin TIAR isoform X2"
                     /protein_id="XP_030098214.1"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
                     /translation="MDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ
                     IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF
                     SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
                     NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAW
                     MGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ"
ORIGIN      
        1 cagaaggcca ctggagaagg gcttccccca ctttcccggg accgcaattc ccggagactt
       61 ggtttcgcgg cttttctctc tgtgttgggt ctctcttgga cccggatagg tcttgactgg
      121 ccagcaggcc cacagcgaca acgtgctccg tcgtgtccag tcgcagggtg tactctttgg
      181 ccgggctttc tgtctcttta gctacttttg ccggacaggc cgtcgcagct ggcctgagca
      241 gtgacctggc gggccgcgcc tgcgccctgc cgcgtttcct gcctggctgg tggtggcggc
      301 cattttgttc atcctcctcc tcctcctgct cctcctggtt ggagcgcagt gtccggagcg
      361 ggctgggggg agcggacccg agagcggggt tcagtacctt ttcctctgtc cccagccggc
      421 gcccggagcc cccctcccct tccttcccgc cccctcccct ccccagccct gccctccccc
      481 ttgtcccggg atcactccgt cgcacccacc atgatggaag acgacggaca gccccggact
      541 ctacacacac aagctaagac atatggttat cttcagaaaa caatatggtg tttatagcct
      601 agatacgtag gtaacctctc cagagatgtg acagaagtcc ttattcttca gttattcagt
      661 cagatcggac cctgtaaaag ctgtaaaatg ataacagagc aacccgatag cagaagggtc
      721 aactcttctg ttggattttc tgttttgcag catacaagca atgacccata ttgctttgtg
      781 gaattttatg aacacagaga tgcagctgct gcattagctg ctatgaatgg gagaaaaatt
      841 ttgggaaagg aggtcaaagt aaactgggca acaacaccaa gtagccagaa aaaagatact
      901 tccaatcact tccatgtgtt tgttggggat ttgagtccag aaattacaac agaagatatc
      961 aaatcagcat ttgccccctt tggtaaaata tcgtaagtat cgtaagcagt gttagactca
     1021 gtagtggcag gcaggactgg tgaggaacat ggagtagagt catggttttc tttctctagt
     1081 tagtgtgttt ttctttggtt tttacttttc ttttggtttg ttttgttttt tgagtagatg
     1141 ttgttgcaaa tgttgatgtc atttcaatgt ttggggtctt gttttcagat aatcttgtgt
     1201 ataatatgtt taaaaatttt aagtgattct gtttgttaca tttaaagcaa atatttagat
     1261 ggtaaaactt ctagctcttt gtcaaatgtt ttcaaatatt gatggttaag aatattgggt
     1321 taatgaaaac taaatgttat cttaattgtg tattaaattt ttattgaagg agtttttaag
     1381 tggtggggga tctaggcaaa tccttgtatt ttatggttaa attgcaaatg ttcatatata
     1441 atgataaatg cattttaaga tttaactttg agaatatata atacaattgc aatattaaaa
     1501 tgttttcatg tctagataat agatatgaga ttaaattgac ttttgttagt gacatttgat
     1561 tttgctagtg aggggacaaa tatgggttga tttttttttt tttaaatatg ctcaaatttt
     1621 gttatttgat taaatatatt ggaaaattaa agatggttgc aagttctata aaatgtcata
     1681 attttgatta aaatgaattg gttatatatt tgtcgattta aattaaatgt ataactacag
     1741 aaatgtttta agaacaacaa cttttctatt aacttataac ttgttgttct atagatttaa
     1801 cttattgtaa gaaagattta attcttaatt ttctattttg atatttgctt tgctttttaa
     1861 tctaaatgtg gtaagtaata ctgttgtaaa attagtgtaa aatgatacag gttgctgttt
     1921 ttgatcttta tttatacctg agacctgcag tttttctaca gtccaagtca caattaaaag
     1981 taatagcatt ctggttattt tgcagaattg ctcataagaa tggacaggat cttgaaggct
     2041 aactgcaagg aactgtgcac actggaactc agttgtagat tttttttctc atttctattt
     2101 attcttatta tacattattt atatatacat attttagtat ttacatttta acattctata
     2161 ttcagtggag ttctatattt ccaatcattt taacttactc actaaaattt ctgtgtaaat
     2221 ttgttgtttt cgtactggtg tgcttagcgt tgttgttagt tttttattct cctttcttaa
     2281 atttctgaaa atgtcaattt ttcaaaattt acagctgccc aaactccaaa atgatgatag
     2341 agaattgacc aagaaaaata aagaaatctg ttaacaggcc atggatgccc gggtagttaa
     2401 agacatggca actggaaagt ccaaaggcta tggttttgta tctttttata acaaactgga
     2461 tgcagagaat gcaattgtgc atatgggggg tcagtggttg ggaggtcgac aaatcagaac
     2521 caattgggcc acacgtaaac cacctgcccc taaaagtaca caagaaacta acactaagca
     2581 gttgagattt gaagatgtag taaaccagtc aagtccaaaa aactgtactg tgtactgtgg
     2641 aggaattgct tcggggctga cagatcaact tatgagacaa acattttcac catttggaca
     2701 aattatggaa atacgagttt ttccagagaa gggctattcg tttgtcagat tttccactca
     2761 cgagagtgcg gcccacgcca ttgtctctgt gaacggcact acaatcgaag gacatgtggt
     2821 gaaatgctat tggggtaaag aatctcctga tatgactaaa aacttccaac aggttgacta
     2881 cagtcagtgg ggccagtgga gccaagtgta tggaaaccca caacagtatg gacagtatat
     2941 ggcaaatggg tggcaagtac caccctatgg agtatatggg cagccgtgga accaacaagg
     3001 atttggagta gatcaatccc cttctgctgc ttggatgggt ggatttggtg ctcagcctcc
     3061 tcaaggacaa gcccctcccc ctgtaatacc tcctccaaac caagctgggt atggaatggc
     3121 aagcttcccg acacagtgag ctgggactcg aaacacgatt gtaattcacc acaggctgca
     3181 gtctcctgtc acactctgaa gacatgaaaa gtaaacatcg gaaaatgaaa atatttattt
     3241 taaaaattga aatgtttgga acctttagca cagctttgct tggtgaagga cacatgtctt
     3301 ctagttctgc ctttttaagt ttttgttcat gatggatatg aacatgattt ttctttgtgt
     3361 acaaaaaact aaaataaagt caataaagac aattctga
//
