LOCUS       XM_030242350            2288 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Tia1 cytotoxic granule-associated RNA
            binding protein-like 1 (Tial1), transcript variant X14, mRNA.
ACCESSION   XM_030242350
VERSION     XM_030242350.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2288
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..2288
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /note="Tia1 cytotoxic granule-associated RNA binding
                     protein-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 52 ESTs, 1053
                     long SRA reads, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     40 samples with support for all annotated introns"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
     CDS             979..1737
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /codon_start=1
                     /product="nucleolysin TIAR isoform X2"
                     /protein_id="XP_030098210.1"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
                     /translation="MDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ
                     IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF
                     SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
                     NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAW
                     MGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ"
ORIGIN      
        1 actttcccgg gaccgcaatt cccggagact tggtttcgcg gcttttctct ctgtgttggg
       61 tctctcttgg acccggatag gtcttgactg gccagcaggc ccacagcgac aacgtgctcc
      121 gtcgtgtcca gtcgcagggt gtactctttg gccgggcttt ctgtctcttt agctactttt
      181 gccggacagg ccgtcgcagc tggcctgagc agtgacctgg cgggccgcgc ctgcgccctg
      241 ccgcgtttcc tgcctggctg gtggtggcgg ccattttgtt catcctcctc ctcctcctgc
      301 tcctcctggt tggagcgcag tgtccggagc gggctggggg gagcggaccc gagagcgggg
      361 ttcagtacct tttcctctgt ccccagccgg cgcccggagc ccccctcccc ttccttcccg
      421 ccccctcccc tccccagccc tgccctcccc cttgtcccgg gatcactccg tcgcacccac
      481 catgatggaa gacgacggac agccccggac tctacacaca caagctaaga catatggtta
      541 tcttcagaaa acaatatggt gtttatagcc tagatacgta ggtaacctct ccagagatgt
      601 gacagaagtc cttattcttc agttattcag tcagatcgga ccctgtaaaa gctgtaaaat
      661 gataacagag catacaagca atgacccata ttgctttgtg gaattttatg aacacagaga
      721 tgcagctgct gcattagctg ctatgaatgg gagaaaaatt ttgggaaagg aggtcaaagt
      781 aaactgggca acaacaccaa gtagccagaa aaaagatact tccaatcact tccatgtgtt
      841 tgttggggat ttgagtccag aaattacaac agaagatatc aaatcagcat ttgccccctt
      901 tggtaaaata tcctgcccaa actccaaaat gatgatagag aattgaccaa gaaaaataaa
      961 gaaatctgtt aacaggccat ggatgcccgg gtagttaaag acatggcaac tggaaagtcc
     1021 aaaggctatg gttttgtatc tttttataac aaactggatg cagagaatgc aattgtgcat
     1081 atggggggtc agtggttggg aggtcgacaa atcagaacca attgggccac acgtaaacca
     1141 cctgccccta aaagtacaca agaaactaac actaagcagt tgagatttga agatgtagta
     1201 aaccagtcaa gtccaaaaaa ctgtactgtg tactgtggag gaattgcttc ggggctgaca
     1261 gatcaactta tgagacaaac attttcacca tttggacaaa ttatggaaat acgagttttt
     1321 ccagagaagg gctattcgtt tgtcagattt tccactcacg agagtgcggc ccacgccatt
     1381 gtctctgtga acggcactac aatcgaagga catgtggtga aatgctattg gggtaaagaa
     1441 tctcctgata tgactaaaaa cttccaacag gttgactaca gtcagtgggg ccagtggagc
     1501 caagtgtatg gaaacccaca acagtatgga cagtatatgg caaatgggtg gcaagtacca
     1561 ccctatggag tatatgggca gccgtggaac caacaaggat ttggagtaga tcaatcccct
     1621 tctgctgctt ggatgggtgg atttggtgct cagcctcctc aaggacaagc ccctccccct
     1681 gtaatacctc ctccaaacca agctgggtat ggaatggcaa gcttcccgac acagtgagct
     1741 gggactcgaa acacgattgt aattcaccac aggctgcagt ctcctgtcac actctgaaga
     1801 catgaaaagt aaacatcgga aaatgaaaat atttatttta aaaattgaaa tgtttggaac
     1861 ctttagcaca gctttgcttg gtgaaggaca catgtcttct agttctgcct ttttaagttt
     1921 ttgttcatga tggatatgaa catgattttt ctttgtgtac aaaaaactaa aataaagtca
     1981 ataaagacaa ttctgactat aaattttgat ataataggag aaatgggtaa tacacttcga
     2041 tccttagaca ctattccatt tttatcttgc tgttcagtat tttaactcac tgtgttttta
     2101 aaagagcaaa aaagggagta tcgtgaaaaa ctgagaatca catcagttcg tcctgaatcc
     2161 tgatactccc ctcccgtccc tgaggcggac cacatagaag gcagcaggag aaagtgtgat
     2221 ttcagaagaa gtccatgatg tgggagtcgc tgtggaagaa atatgttatt ctcttatgtt
     2281 aaagaaaa
//
