LOCUS       XM_030242348            3347 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus Tia1 cytotoxic granule-associated RNA
            binding protein-like 1 (Tial1), transcript variant X7, mRNA.
ACCESSION   XM_030242348
VERSION     XM_030242348.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242348.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3347
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..3347
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /note="Tia1 cytotoxic granule-associated RNA binding
                     protein-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 mRNAs, 52 ESTs, 1065
                     long SRA reads, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     47 samples with support for all annotated introns"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
     CDS             2330..3088
                     /gene="Tial1"
                     /gene_synonym="5330433G13Rik; mTIAR; TIAR"
                     /codon_start=1
                     /product="nucleolysin TIAR isoform X2"
                     /protein_id="XP_030098208.1"
                     /db_xref="GeneID:21843"
                     /db_xref="MGI:MGI:107913"
                     /translation="MDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQ
                     IRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTF
                     SPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTK
                     NFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVDQSPSAAW
                     MGGFGAQPPQGQAPPPVIPPPNQAGYGMASFPTQ"
ORIGIN      
        1 cagaaggcca ctggagaagg gcttccccca ctttcccggg accgcaattc ccggagactt
       61 ggtttcgcgg cttttctctc tgtgttgggt ctctcttgga cccggatagg tcttgactgg
      121 ccagcaggcc cacagcgaca acgtgctccg tcgtgtccag tcgcagggtg tactctttgg
      181 ccgggctttc tgtctcttta gctacttttg ccggacaggc cgtcgcagct ggcctgagca
      241 gtgacctggc gggccgcgcc tgcgccctgc cgcgtttcct gcctggctgg tggtggcggc
      301 cattttgttc atcctcctcc tcctcctgct cctcctggtt ggagcgcagt gtccggagcg
      361 ggctgggggg agcggacccg agagcggggt tcagtacctt ttcctctgtc cccagccggc
      421 gcccggagcc cccctcccct tccttcccgc cccctcccct ccccagccct gccctccccc
      481 ttgtcccggg atcactccgt cgcacccacc atgatggaag acgacggaca gccccggact
      541 ctacacacac aagctaagac atatggttat cttcagaaaa caatatggtg tttatagcct
      601 agatacgtag gtaacctctc cagagatgtg acagaagtcc ttattcttca gttattcagt
      661 cagatcggac cctgtaaaag ctgtaaaatg ataacagagc atacaagcaa tgacccatat
      721 tgctttgtgg aattttatga acacagagat gcagctgctg cattagctgc tatgaatggg
      781 agaaaaattt tgggaaagga ggtcaaagta aactgggcaa caacaccaag tagccagaaa
      841 aaagatactt ccaatcactt ccatgtgttt gttggggatt tgagtccaga aattacaaca
      901 gaagatatca aatcagcatt tgcccccttt ggtaaaatat cgtaagtatc gtaagcagtg
      961 ttagactcag tagtggcagg caggactggt gaggaacatg gagtagagtc atggttttct
     1021 ttctctagtt agtgtgtttt tctttggttt ttacttttct tttggtttgt tttgtttttt
     1081 gagtagatgt tgttgcaaat gttgatgtca tttcaatgtt tggggtcttg ttttcagata
     1141 atcttgtgta taatatgttt aaaaatttta agtgattctg tttgttacat ttaaagcaaa
     1201 tatttagatg gtaaaacttc tagctctttg tcaaatgttt tcaaatattg atggttaaga
     1261 atattgggtt aatgaaaact aaatgttatc ttaattgtgt attaaatttt tattgaagga
     1321 gtttttaagt ggtgggggat ctaggcaaat ccttgtattt tatggttaaa ttgcaaatgt
     1381 tcatatataa tgataaatgc attttaagat ttaactttga gaatatataa tacaattgca
     1441 atattaaaat gttttcatgt ctagataata gatatgagat taaattgact tttgttagtg
     1501 acatttgatt ttgctagtga ggggacaaat atgggttgat tttttttttt ttaaatatgc
     1561 tcaaattttg ttatttgatt aaatatattg gaaaattaaa gatggttgca agttctataa
     1621 aatgtcataa ttttgattaa aatgaattgg ttatatattt gtcgatttaa attaaatgta
     1681 taactacaga aatgttttaa gaacaacaac ttttctatta acttataact tgttgttcta
     1741 tagatttaac ttattgtaag aaagatttaa ttcttaattt tctattttga tatttgcttt
     1801 gctttttaat ctaaatgtgg taagtaatac tgttgtaaaa ttagtgtaaa atgatacagg
     1861 ttgctgtttt tgatctttat ttatacctga gacctgcagt ttttctacag tccaagtcac
     1921 aattaaaagt aatagcattc tggttatttt gcagaattgc tcataagaat ggacaggatc
     1981 ttgaaggcta actgcaagga actgtgcaca ctggaactca gttgtagatt ttttttctca
     2041 tttctattta ttcttattat acattattta tatatacata ttttagtatt tacattttaa
     2101 cattctatat tcagtggagt tctatatttc caatcatttt aacttactca ctaaaatttc
     2161 tgtgtaaatt tgttgttttc gtactggtgt gcttagcgtt gttgttagtt ttttattctc
     2221 ctttcttaaa tttctgaaaa tgtcaatttt tcaaaattta cagctgccca aactccaaaa
     2281 tgatgataga gaattgacca agaaaaataa agaaatctgt taacaggcca tggatgcccg
     2341 ggtagttaaa gacatggcaa ctggaaagtc caaaggctat ggttttgtat ctttttataa
     2401 caaactggat gcagagaatg caattgtgca tatggggggt cagtggttgg gaggtcgaca
     2461 aatcagaacc aattgggcca cacgtaaacc acctgcccct aaaagtacac aagaaactaa
     2521 cactaagcag ttgagatttg aagatgtagt aaaccagtca agtccaaaaa actgtactgt
     2581 gtactgtgga ggaattgctt cggggctgac agatcaactt atgagacaaa cattttcacc
     2641 atttggacaa attatggaaa tacgagtttt tccagagaag ggctattcgt ttgtcagatt
     2701 ttccactcac gagagtgcgg cccacgccat tgtctctgtg aacggcacta caatcgaagg
     2761 acatgtggtg aaatgctatt ggggtaaaga atctcctgat atgactaaaa acttccaaca
     2821 ggttgactac agtcagtggg gccagtggag ccaagtgtat ggaaacccac aacagtatgg
     2881 acagtatatg gcaaatgggt ggcaagtacc accctatgga gtatatgggc agccgtggaa
     2941 ccaacaagga tttggagtag atcaatcccc ttctgctgct tggatgggtg gatttggtgc
     3001 tcagcctcct caaggacaag cccctccccc tgtaatacct cctccaaacc aagctgggta
     3061 tggaatggca agcttcccga cacagtgagc tgggactcga aacacgattg taattcacca
     3121 caggctgcag tctcctgtca cactctgaag acatgaaaag taaacatcgg aaaatgaaaa
     3181 tatttatttt aaaaattgaa atgtttggaa cctttagcac agctttgctt ggtgaaggac
     3241 acatgtcttc tagttctgcc tttttaagtt tttgttcatg atggatatga acatgatttt
     3301 tctttgtgta caaaaaacta aaataaagtc aataaagaca attctga
//
