LOCUS       XM_036159871            1275 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus thrombopoietin (Thpo), transcript variant
            X10, mRNA.
ACCESSION   XM_036159871
VERSION     XM_036159871.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..1275
                     /gene="Thpo"
                     /gene_synonym="Mgdf; Ml; Mpllg; Tpo"
                     /note="thrombopoietin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 long SRA reads, 1
                     Protein, and 94% coverage of the annotated genomic feature
                     by RNAseq alignments, including 15 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:21832"
                     /db_xref="MGI:MGI:101875"
     CDS             583..1275
                     /gene="Thpo"
                     /gene_synonym="Mgdf; Ml; Mpllg; Tpo"
                     /codon_start=1
                     /product="thrombopoietin isoform X10"
                     /protein_id="XP_036015764.1"
                     /db_xref="GeneID:21832"
                     /db_xref="MGI:MGI:101875"
                     /translation="MENPDGTEQGTGHSRGSVPSTGGSDGSTRTVGTLLPLIPPGTAF
                     WAGSPPLGGPAGPPRNPASSTGQDHSSQGPQCPLLELATTASGKGALPASGRRSHPLC
                     QTDPANHSCPKQYFSTPHTKQVPKQDFWIVGDELQCHSQNCWPWTSEQASGIQSQDYS
                     WSAKSNLQVPSPNLWIPEQDTRTCEWNSWALCWNLTSDPGSLRHLARSFQQRLPGIQP
                     PGWTSSFSKPCS"
ORIGIN      
        1 atgctgtcag aattcagcag caggtcccag gttctcatgt cgccaggaca tgagacagtt
       61 cccgctatac aaattctctc tagagtgtgt gtgggtggag gagctgggct ctattcatgg
      121 accatggtcc agccatgggc tctagtccca gtagacagga aaagaagtcg tcatttccgg
      181 gggagccttc acctgggctt ggtggctctc tgctctctga ttgggcggaa gtggcctggg
      241 caggcttgtg accctactac agaggagggg ctgtacccca accagtgtct tcctacctac
      301 ttgttcccca gagtgctgcc tgctgtgcac ctgggtcctg aggcccttct ccacccggac
      361 agagtccttg gcccacctct ctcccacccg actctgccga aagaagcaca gaagctcaag
      421 ccgcctccat ggccccagga aagattcagg ggagaggccc catacaggga gccacttcag
      481 ttagacaccc tggccagaat ggagctgact gagtcagtgt cccgacgtcg accctttgtc
      541 tatccctgtt ctgctgcctg ctgtggactt tagcctggga gaatggaaaa cccagacgga
      601 acagagcaag gcacaggaca ttctaggggc agtgtccctt ctactggagg gagtgatggc
      661 agcacgagga cagttggaac cctcctgcct ctcatccctc ctgggacagc tttctgggca
      721 ggttcgcctc ctcttggggg ccctgcaggg cctcctagga acccagcttc ctctacaggg
      781 caggaccaca gctcacaagg accccaatgc cctcttcttg agcttgcaac aactgcttcg
      841 gggaaaggtg cgcttcctgc ttctggtaga aggtcccacc ctctgtgtca gacggaccct
      901 gccaaccaca gctgtcccaa gcagtacttc tcaactcctc acactaaaca agttcccaaa
      961 caggacttct ggattgttgg agacgaactt cagtgtcaca gccagaactg ctggccctgg
     1021 acttctgagc aggcttcagg gattcagagt caagattact cctggtcagc taaatcaaac
     1081 ctccaggtcc ccagtccaaa tctctggata cctgaacagg acacacggac ctgtgaatgg
     1141 aactcatggg ctctttgctg gaacctcact tcagaccctg gaagcctcag acatctcgcc
     1201 cggagctttc aacaaaggct ccctggcatt caacctccag ggtggacttc ctccttctcc
     1261 aagccttgct cctga
//
