LOCUS       XM_017316933            2150 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus thrombopoietin (Thpo), transcript variant
            X9, mRNA.
ACCESSION   XM_017316933
VERSION     XM_017316933.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017316933.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..2150
                     /gene="Thpo"
                     /gene_synonym="Mgdf; Ml; Mpllg; Tpo"
                     /note="thrombopoietin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 29 long SRA reads, and
                     97% coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:21832"
                     /db_xref="MGI:MGI:101875"
     CDS             322..1326
                     /gene="Thpo"
                     /gene_synonym="Mgdf; Ml; Mpllg; Tpo"
                     /codon_start=1
                     /product="thrombopoietin isoform X9"
                     /protein_id="XP_017172422.1"
                     /db_xref="GeneID:21832"
                     /db_xref="MGI:MGI:101875"
                     /translation="MLSEFSSRSQVLMSPGHETVPAIQILSRVCVGGGAGLYSWTMVQ
                     PWALVPVDRKRSRHFRGSLHLGLVALCSLIGRKWPGQACDPTTEEGLYPNQCLPTYLF
                     PRVLPAVHLGPEALLHPDRVLGPPLSHPTLPKEAQKLKPPPWPQERFRGEAPYREPLQ
                     LDTLARMELTDLLLAAMLLAVARLTLSSPVAPACDPRLLNKLLRDSHLLHSRLSQCPD
                     VDPLSIPVLLPAVDFSLGEWKTQTEQSKAQDILGAVSLLLEGVMAARGQLEPSCLSSL
                     LGQLSGQVRLLLGALQGLLGTQKRPDMWAYSLASGPSSALSFLYRAGPQLTRTPMPSS
                     "
ORIGIN      
        1 ctgtagctgt cttcagacac tccaggagag tcagatctcg atggttgtga gccaccatgt
       61 ggttgctggt atttgaactt cggaagagca gacgggtgct cttacccact gagccatctc
      121 accagcccct ctgggctcaa tcttaaccaa acacatatcc ctttacttcc cgggtcccac
      181 atattgtcca tactgtcttt ctgataacgt gatcattttc taatataggc aatacctact
      241 ttgccagttg gaaaggggaa atgccaggaa agacactcct ctggagcagg ggaatataga
      301 aggaaaagca agcaagccag catgctgtca gaattcagca gcaggtccca ggttctcatg
      361 tcgccaggac atgagacagt tcccgctata caaattctct ctagagtgtg tgtgggtgga
      421 ggagctgggc tctattcatg gaccatggtc cagccatggg ctctagtccc agtagacagg
      481 aaaagaagtc gtcatttccg ggggagcctt cacctgggct tggtggctct ctgctctctg
      541 attgggcgga agtggcctgg gcaggcttgt gaccctacta cagaggaggg gctgtacccc
      601 aaccagtgtc ttcctaccta cttgttcccc agagtgctgc ctgctgtgca cctgggtcct
      661 gaggcccttc tccacccgga cagagtcctt ggcccacctc tctcccaccc gactctgccg
      721 aaagaagcac agaagctcaa gccgcctcca tggccccagg aaagattcag gggagaggcc
      781 ccatacaggg agccacttca gttagacacc ctggccagaa tggagctgac tgatttgctc
      841 ctggcggcca tgcttcttgc agtggcaaga ctaactctgt ccagccccgt agctcctgcc
      901 tgtgacccca gactcctaaa taaactgctg cgtgactccc acctccttca cagccgactg
      961 agtcagtgtc ccgacgtcga ccctttgtct atccctgttc tgctgcctgc tgtggacttt
     1021 agcctgggag aatggaaaac ccagacggaa cagagcaagg cacaggacat tctaggggca
     1081 gtgtcccttc tactggaggg agtgatggca gcacgaggac agttggaacc ctcctgcctc
     1141 tcatccctcc tgggacagct ttctgggcag gttcgcctcc tcttgggggc cctgcagggc
     1201 ctcctaggaa cccagaagag gcctgatatg tgggcctact cactggcctc aggcccatcc
     1261 tctgccctca gcttcctcta cagggcagga ccacagctca caaggacccc aatgccctct
     1321 tcttgagctt gcaacaactg cttcggggaa aggtgcgctt cctgcttctg gtagaaggtc
     1381 ccaccctctg tgtcagacgg accctgccaa ccacagctgt cccaagcagt acttctcaac
     1441 tcctcacact aaacaagttc ccaaacagga cttctggatt gttggagacg aacttcagtg
     1501 tcacagccag aactgctggc cctggacttc tgagcaggct tcagggattc agagtcaaga
     1561 ttactcctgg tcagctaaat caaacctcca ggtccccagt ccaaatctct ggatacctga
     1621 acaggacaca cggacctgtg aatggaactc atgggctctt tgctggaacc tcacttcaga
     1681 ccctggaagc ctcagacatc tcgcccggag ctttcaacaa aggctccctg gcattcaacc
     1741 tccagggtgg acttcctcct tctccaagcc ttgctcctga tggacacaca cccttccctc
     1801 cttcacctgc cttgcccacc acccatggat ctccacccca gctccacccc ctgtttcctg
     1861 acccttccac caccatgcct aactctaccg cccctcatcc agtcacaatg taccctcatc
     1921 ccaggaattt gtctcaggaa acatagcgcg ggcactggcc cagtgagcgt ctgcagcttc
     1981 tctcggggac aagcttcccc aggaaggctg agaggcagct gcatctgctc cagatgttct
     2041 gctttcacct aaaaggccct ggggaaggga tacacagcac tggagattgt aaaattttag
     2101 gagctatttt tttttaacct atcagcaata ttcatcagag cagctagcga
//
