LOCUS       XM_017316928            2130 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus thrombopoietin (Thpo), transcript variant
            X4, mRNA.
ACCESSION   XM_017316928
VERSION     XM_017316928.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000082.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="16"
     gene            1..2130
                     /gene="Thpo"
                     /gene_synonym="Mgdf; Ml; Mpllg; Tpo"
                     /note="thrombopoietin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 6 ESTs, 46 long
                     SRA reads, 2 Proteins, and 97% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:21832"
                     /db_xref="MGI:MGI:101875"
     CDS             324..1880
                     /gene="Thpo"
                     /gene_synonym="Mgdf; Ml; Mpllg; Tpo"
                     /codon_start=1
                     /product="thrombopoietin isoform X4"
                     /protein_id="XP_017172417.1"
                     /db_xref="GeneID:21832"
                     /db_xref="MGI:MGI:101875"
                     /translation="MLSEFSSRSQVLMSPGHETVPAIQILSRVCVGGGAGLYSWTMVQ
                     PWALVPVDRKRSRHFRGSLHLGLVALCSLIGRKWPGQACDPTTEEGLYPNQCLPTYLF
                     PRVLPAVHLGPEALLHPDRVLGPPLSHPTLPKEAQKLKPPPWPQERFRGEAPYREPLQ
                     LDTLARMELTDLLLAAMLLAVARLTLSSPVAPACDPRLLNKLLRDSHLLHSRLSQCPD
                     VDPLSIPVLLPAVDFSLGEWKTQTEQSKAQDILGAVSLLLEGVMAARGQLEPSCLSSL
                     LGQLSGQVRLLLGALQGLLGTQGRTTAHKDPNALFLSLQQLLRGKVRFLLLVEGPTLC
                     VRRTLPTTAVPSSTSQLLTLNKFPNRTSGLLETNFSVTARTAGPGLLSRLQGFRVKIT
                     PGQLNQTSRSPVQISGYLNRTHGPVNGTHGLFAGTSLQTLEASDISPGAFNKGSLAFN
                     LQGGLPPSPSLAPDGHTPFPPSPALPTTHGSPPQLHPLFPDPSTTMPNSTAPHPVTMY
                     PHPRNLSQET"
ORIGIN      
        1 cactgtagct gtcttcagac actccaggag agtcagatct cgatggttgt gagccaccat
       61 gtggttgctg gtatttgaac ttcggaagag cagacgggtg ctcttaccca ctgagccatc
      121 tcaccagccc ctctgggctc aatcttaacc aaacacatat ccctttactt cccgggtccc
      181 acatattgtc catactgtct ttctgataac gtgatcattt tctaatatag gcaataccta
      241 ctttgccagt tggaaagggg aaatgccagg aaagacactc ctctggagca ggggaatata
      301 gaaggaaaag caagcaagcc agcatgctgt cagaattcag cagcaggtcc caggttctca
      361 tgtcgccagg acatgagaca gttcccgcta tacaaattct ctctagagtg tgtgtgggtg
      421 gaggagctgg gctctattca tggaccatgg tccagccatg ggctctagtc ccagtagaca
      481 ggaaaagaag tcgtcatttc cgggggagcc ttcacctggg cttggtggct ctctgctctc
      541 tgattgggcg gaagtggcct gggcaggctt gtgaccctac tacagaggag gggctgtacc
      601 ccaaccagtg tcttcctacc tacttgttcc ccagagtgct gcctgctgtg cacctgggtc
      661 ctgaggccct tctccacccg gacagagtcc ttggcccacc tctctcccac ccgactctgc
      721 cgaaagaagc acagaagctc aagccgcctc catggcccca ggaaagattc aggggagagg
      781 ccccatacag ggagccactt cagttagaca ccctggccag aatggagctg actgatttgc
      841 tcctggcggc catgcttctt gcagtggcaa gactaactct gtccagcccc gtagctcctg
      901 cctgtgaccc cagactccta aataaactgc tgcgtgactc ccacctcctt cacagccgac
      961 tgagtcagtg tcccgacgtc gaccctttgt ctatccctgt tctgctgcct gctgtggact
     1021 ttagcctggg agaatggaaa acccagacgg aacagagcaa ggcacaggac attctagggg
     1081 cagtgtccct tctactggag ggagtgatgg cagcacgagg acagttggaa ccctcctgcc
     1141 tctcatccct cctgggacag ctttctgggc aggttcgcct cctcttgggg gccctgcagg
     1201 gcctcctagg aacccagggc aggaccacag ctcacaagga ccccaatgcc ctcttcttga
     1261 gcttgcaaca actgcttcgg ggaaaggtgc gcttcctgct tctggtagaa ggtcccaccc
     1321 tctgtgtcag acggaccctg ccaaccacag ctgtcccaag cagtacttct caactcctca
     1381 cactaaacaa gttcccaaac aggacttctg gattgttgga gacgaacttc agtgtcacag
     1441 ccagaactgc tggccctgga cttctgagca ggcttcaggg attcagagtc aagattactc
     1501 ctggtcagct aaatcaaacc tccaggtccc cagtccaaat ctctggatac ctgaacagga
     1561 cacacggacc tgtgaatgga actcatgggc tctttgctgg aacctcactt cagaccctgg
     1621 aagcctcaga catctcgccc ggagctttca acaaaggctc cctggcattc aacctccagg
     1681 gtggacttcc tccttctcca agccttgctc ctgatggaca cacacccttc cctccttcac
     1741 ctgccttgcc caccacccat ggatctccac cccagctcca ccccctgttt cctgaccctt
     1801 ccaccaccat gcctaactct accgcccctc atccagtcac aatgtaccct catcccagga
     1861 atttgtctca ggaaacatag cgcgggcact ggcccagtga gcgtctgcag cttctctcgg
     1921 ggacaagctt ccccaggaag gctgagaggc agctgcatct gctccagatg ttctgctttc
     1981 acctaaaagg ccctggggaa gggatacaca gcactggaga ttgtaaaatt ttaggagcta
     2041 ttttttttta acctatcagc aatattcatc agagcagcta gcgatctttg gtctattttc
     2101 ggtataaatt tgaaaatcac taattctcta
//
