LOCUS       NM_025435                991 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus THO complex 7 (Thoc7), transcript variant 1, mRNA.
ACCESSION   NM_025435 NM_177206 XM_905570
VERSION     NM_025435.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 991)
  AUTHORS   Sakuma T, Tonne JM and Ikeda Y.
  TITLE     Murine leukemia virus uses TREX components for efficient nuclear
            export of unspliced viral transcripts
  JOURNAL   Viruses 6 (3), 1135-1148 (2014)
   PUBMED   24618812
  REMARK    GeneRIF: These results imply that murine leukemia virus requires
            UAP56, THOC5 and THOC7, in addition to NXF1, for nuclear export of
            viral transcripts.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 991)
  AUTHORS   Wang L, Miao YL, Zheng X, Lackford B, Zhou B, Han L, Yao C, Ward
            JM, Burkholder A, Lipchina I, Fargo DC, Hochedlinger K, Shi Y,
            Williams CJ and Hu G.
  TITLE     The THO complex regulates pluripotency gene mRNA export and
            controls embryonic stem cell self-renewal and somatic cell
            reprogramming
  JOURNAL   Cell Stem Cell 13 (6), 676-690 (2013)
   PUBMED   24315442
REFERENCE   3  (bases 1 to 991)
  AUTHORS   Tascou S, Kang TW, Trappe R, Engel W and Burfeind P.
  TITLE     Identification and characterization of NIF3L1 BP1, a novel
            cytoplasmic interaction partner of the NIF3L1 protein
  JOURNAL   Biochem Biophys Res Commun 309 (2), 440-448 (2003)
   PUBMED   12951069
REFERENCE   4  (bases 1 to 991)
  AUTHORS   VanBuren V, Piao Y, Dudekula DB, Qian Y, Carter MG, Martin PR,
            Stagg CA, Bassey UC, Aiba K, Hamatani T, Kargul GJ, Luo AG, Kelso
            J, Hide W and Ko MS.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CK329337.1, AK005176.1 and CF949442.1.
            
            [WARNING] On Dec 4, 2023 this sequence was replaced by NM_025435.4.
            
            On Oct 23, 2013 this sequence version replaced NM_025435.2.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660817.563500.1, BC054419.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                CK329337.1         1-86
            87-867              AK005176.1         14-794
            868-991             CF949442.1         340-463
FEATURES             Location/Qualifiers
     source          1..991
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 7.08 cM"
     gene            1..991
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /note="THO complex 7"
                     /db_xref="GeneID:66231"
                     /db_xref="MGI:MGI:1913481"
     exon            1..129
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            130..247
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            248..375
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            376..462
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            463..520
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            521..587
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            588..657
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
     exon            658..973
                     /gene="Thoc7"
                     /gene_synonym="Nif3l1bp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcgccgcc gcctcctcct ccatgactgt ttacccggct gcattgtggg agtttgacct
       61 tcgccgccaa ccgccgcctc agctcggccg ccgccgccgc cgcgcacgcc atgggagccg
      121 tgactgacga cgaagttata cggaaacgtc ttctgattga tggagatggt gctggggatg
      181 atcggagaat taatctcctc gtgaaaagct tcattaaatg gtgcaactct ggatcccaag
      241 aggaagggta tagccagtac caacgcatgc tgagcactct gtcccagtgt gaattttcaa
      301 tgggcaaaac attgctggta tatgatatga atctcagaga aatggaaaat tatgaaaaaa
      361 tatacaaaga aatagaatgt agtattgctg gagcacatga aaaaattgct gagtgtaaaa
      421 agcagattct tcaagcaaaa cgaatacgaa aaaatcgaca agaatatgac gctttggcca
      481 aagtgatcca gcatcaccca gacaggcatg agacactgaa ggagctagag gctctgggca
      541 aagaattaga gcatctctca catattaaag aaagtgttga agataagctg gaattgagac
      601 ggaaacaatt tcacgttctt cttagtacca tccatgaact tcaacagaca ttggagaatg
      661 atgacaagct gtcagaggtg gatgaagctc aagaaagcac catggaagca gaccctaagc
      721 catagatgga ctgaccgtcg ccatttacag ggacagcgaa tagctgcatg ggcttcctgg
      781 gttcagtgtg ttgtactttt gggatatttc aacttcagca ttgaagtact ttgctttcaa
      841 gtattcatgt gtcgttcata tttcttcaca gaacggaaat gtatcccata tatatgtatt
      901 ttttaaatac atttttatcc ttaaacatag aaatcagcat ctgaaaatat ttaataaaat
      961 gtctcaaggt ggaaaaaaaa aaaaaaaaaa a
//
