LOCUS       NM_026909               1164 bp    mRNA    linear   ROD 18-JUN-2024
DEFINITION  Mus musculus THAP domain containing 7 (Thap7), mRNA.
ACCESSION   NM_026909
VERSION     NM_026909.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1164)
  AUTHORS   Vong,K.I., Lee,S., Au,K.S., Crowley,T.B., Capra,V., Martino,J.,
            Haller,M., Araujo,C., Machado,H.R., George,R., Gerding,B.,
            James,K.N., Stanley,V., Jiang,N., Alu,K., Meave,N., Nidhiry,A.S.,
            Jiwani,F., Tang,I., Nisal,A., Jhamb,I., Patel,A., Patel,A.,
            McEvoy-Venneri,J., Barrows,C., Shen,C., Ha,Y.J., Howarth,R.,
            Strain,M., Ashley-Koch,A.E., Azam,M., Mumtaz,S., Bot,G.M.,
            Finnell,R.H., Kibar,Z., Marwan,A.I., Melikishvili,G., Meltzer,H.S.,
            Mutchinick,O.M., Stevenson,D.A., Mroczkowski,H.J., Ostrander,B.,
            Schindewolf,E., Moldenhauer,J., Zackai,E.H., Emanuel,B.S.,
            Garcia-Minaur,S., Nowakowska,B.A., Stevenson,R.E., Zaki,M.S.,
            Northrup,H., McNamara,H.K., Aldinger,K.A., Phelps,I.G., Deng,M.,
            Glass,I.A., Morrow,B., McDonald-McGinn,D.M., Sanna-Cherchi,S.,
            Lamb,D.J. and Gleeson,J.G.
  CONSRTM   Spina Bifida Sequencing Consortiumdouble dagger
  TITLE     Risk of meningomyelocele mediated by the common 22q11.2 deletion
  JOURNAL   Science 384 (6695), 584-590 (2024)
   PUBMED   38696583
REFERENCE   2  (bases 1 to 1164)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 1164)
  AUTHORS   Racedo,S.E., McDonald-McGinn,D.M., Chung,J.H., Goldmuntz,E.,
            Zackai,E., Emanuel,B.S., Zhou,B., Funke,B. and Morrow,B.E.
  TITLE     Mouse and human CRKL is dosage sensitive for cardiac outflow tract
            formation
  JOURNAL   Am J Hum Genet 96 (2), 235-244 (2015)
   PUBMED   25658046
REFERENCE   4  (bases 1 to 1164)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1164)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC113006.9.
            
            On Nov 17, 2006 this sequence version replaced NM_026909.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC018221.1, AK154641.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                AC113006.9         179736-179763       c
            29-108              AC113006.9         179489-179568       c
            109-264             AC113006.9         178941-179096       c
            265-405             AC113006.9         177646-177786       c
            406-1164            AC113006.9         176693-177451       c
FEATURES             Location/Qualifiers
     source          1..1164
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 10.86 cM"
     gene            1..1164
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /note="THAP domain containing 7"
                     /db_xref="GeneID:69009"
                     /db_xref="MGI:MGI:1916259"
     exon            1..28
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             29..958
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /codon_start=1
                     /product="THAP domain-containing protein 7"
                     /protein_id="NP_081185.1"
                     /db_xref="CCDS:CCDS28004.1"
                     /db_xref="GeneID:69009"
                     /db_xref="MGI:MGI:1916259"
                     /translation="MPRHCSAAGCCTRDTRETRNRGISFHRLPKKDNPRRGLWLANCQ
                     RLDPSGQGLWDPTSEYIYFCSKHFEENCFELVGISGYHRLKEGAVPTIFESFSKLRRT
                     AKTKGHGYPPGLPDVSRLRRCRKRCSERQGPTTPFSPPPRADIICFPVEEASAPATLP
                     ASPAVRLDPGLNSPFSDLLGPLGAQADEAGCSTQPSPEQHPSPLEPQPASPSAYMLRL
                     PPPAGAYIQNEHSYQVGSALLWKRRAEAALDALDKTQRQLQACKRREQRLRLRLTKLQ
                     QERAREKRAQADARQTLKDHVQDFAMQLSSSMA"
     exon            29..108
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            109..264
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            265..405
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            406..1164
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1045..1050
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1068
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
                     /note="major polyA site"
     polyA_site      1164
                     /gene="Thap7"
                     /gene_synonym="1810004B07Rik"
ORIGIN      
        1 attttggcgg cgcagcaatg gcaagaccat gccgcgacac tgctccgccg ccggctgctg
       61 cacacgggat acgcgcgaga ctcgcaaccg cggcatctcc ttccacagac ttcccaagaa
      121 agacaacccc aggcgcggct tgtggctggc caactgtcag cggctggacc ccagcggcca
      181 gggcctgtgg gatccgacct ctgagtacat ctacttctgc tccaaacact tcgaggaaaa
      241 ctgctttgag ctggtgggaa tcagtgggta tcacaggctg aaggaggggg cagtccccac
      301 catatttgag tctttctcca agttgcgtcg aacagccaag accaaggggc atggttatcc
      361 acctggcctg cctgacgtca gccggctccg gcgatgcagg aagcgctgct ccgaaagaca
      421 aggacccaca actccctttt ctccacctcc tcgtgccgat atcatctgct tccctgtgga
      481 agaagcctca gcacctgcca ctctgcccgc atccccagct gtgaggctgg accctggcct
      541 taacagcccc ttctcagatc tcctgggccc tctaggtgct caggcggatg aagcgggctg
      601 tagcacacag ccctcaccag agcagcaccc ctcccctctt gagccacagc ctgcctcccc
      661 atctgcatac atgttacggc tgccacctcc tgctggagcc tacatccaga atgagcacag
      721 ctaccaagtg gggagcgcct tgctctggaa gaggcgagct gaagcagctc ttgatgctct
      781 ggacaagacc cagcgccagc tgcaggcctg caagcggcgg gagcagcggc ttaggctgcg
      841 actgaccaag ctgcagcagg aacgggcacg ggagaagcga gcacaggcag atgcccgcca
      901 gactctgaag gaccatgtac aggactttgc tatgcagttg agcagcagta tggcctgaga
      961 gagggactac atgcccaggc tctggcttct ttttctcaga gacacttgac cagaactgca
     1021 tccactgggc tggccaaatg ttacaataaa gtggatgcta gaaagagact gctgtttggc
     1081 ttggctggag gtgcccggct cctccccaga ccatggccaa aaccctagag agctcagatc
     1141 ctggcatgcc acctcttgac cctg
//
