LOCUS       NM_175152               1133 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus THAP domain containing, apoptosis associated protein 3
            (Thap3), transcript variant 1, mRNA.
ACCESSION   NM_175152
VERSION     NM_175152.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1133)
  AUTHORS   Taher,L., Collette,N.M., Murugesh,D., Maxwell,E., Ovcharenko,I. and
            Loots,G.G.
  TITLE     Global gene expression analysis of murine limb development
  JOURNAL   PLoS One 6 (12), e28358 (2011)
   PUBMED   22174793
REFERENCE   2  (bases 1 to 1133)
  AUTHORS   Huttenhofer,A., Kiefmann,M., Meier-Ewert,S., O'Brien,J.,
            Lehrach,H., Bachellerie,J.P. and Brosius,J.
  TITLE     RNomics: an experimental approach that identifies 201 candidates
            for novel, small, non-messenger RNAs in mouse
  JOURNAL   EMBO J 20 (11), 2943-2953 (2001)
   PUBMED   11387227
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY013572.1, BC094395.1 and BC059091.1.
            
            On Mar 21, 2009 this sequence version replaced NM_175152.3.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC094395.1, AK050740.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-19                BY013572.1         1-19
            20-1112             BC094395.1         1-1093
            1113-1133           BC059091.1         996-1016
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 82.8 cM"
     gene            1..1133
                     /gene="Thap3"
                     /gene_synonym="2010013E08Rik; 2210418H06Rik"
                     /note="THAP domain containing, apoptosis associated
                     protein 3"
                     /db_xref="GeneID:69876"
                     /db_xref="MGI:MGI:1917126"
     exon            1..104
                     /gene="Thap3"
                     /gene_synonym="2010013E08Rik; 2210418H06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            105..297
                     /gene="Thap3"
                     /gene_synonym="2010013E08Rik; 2210418H06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            298..399
                     /gene="Thap3"
                     /gene_synonym="2010013E08Rik; 2210418H06Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            400..1114
                     /gene="Thap3"
                     /gene_synonym="2010013E08Rik; 2210418H06Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1093..1098
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Thap3"
                     /gene_synonym="2010013E08Rik; 2210418H06Rik"
                     /note="hexamer: AATAAA"
     polyA_site      1114
                     /gene="Thap3"
                     /gene_synonym="2010013E08Rik; 2210418H06Rik"
                     /note="major polyA site"
ORIGIN      
        1 ttttttaggg gcagtgggcc catctccgag atgccgaagt cttgcgcggc ccggcaatgc
       61 tgcaaccgct acagcagccg caggaagcag ctcaccttcc accggttccc cttcagccgc
      121 ccggagctgt tgagggagtg ggtgctcaac atcggccggg ctgacttcaa gcctaagcag
      181 cacacagtca tctgctcgga acacttcaga cccgagtgct tcagcgcctt tgggaaccgc
      241 aagaacctga aacacaatgc tgtgcccacg gtgttcgctt ttcagaaccc cacagaggtc
      301 tgccctgagg tgggggctgg tggggacagc tcagggagga acatggacac cacactggaa
      361 gaacttcagc ctccaacccc ggaaggcccc gtgcagcagg tcttaccaga tcgagaagca
      421 atggaggcca cggaggccgc tggcctgcct gccagccctc tggggttgaa gaggcccctt
      481 ccgggacagc cgtctgatca cagctatgcc ctttcggact tggataccct caaaaaaaaa
      541 ctctttctca cactgaagga aaacaagagg cttcggaagc ggctgaaagc ccagaggctg
      601 ctgttgcgga ggacatgtgg ccgcctgaga gcctacagag agggacagcc gggacctcgg
      661 gccagacggc cggcacaggg aagctgagcc tgagcaagct ctgggatgtg ggggtggtgg
      721 caacacctta gcaggaagtg gtgttctggc ctgctatggg cgtttctacc cgctgctgat
      781 gctgcaggtg ccttgagagt gggatgggat gctgcgacag gcagttgtcg ggtgggggcc
      841 caagtactgc ggaggcaccg tcccaggttt cttgggctga ggctgtcagc tgtggggaag
      901 cagcagtgac caaatgtgag ccgtcacaac cccctcaaga gatgctccca gagggagagc
      961 tggtcattct tacagccggt ggggtcctta ctgtctcccc ataggagcca ttctgatggc
     1021 aggcagggca agggtccccg tcagcctgta tttctgagtg actctttttc tgcctggttc
     1081 gtgtagatgt ggaataaatc ttttgaagtc tccaaaaaaa aaaaaaaaaa aaa
//
