LOCUS       XM_006524004            2379 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus transcription factor EB (Tfeb), transcript
            variant X2, mRNA.
ACCESSION   XM_006524004
VERSION     XM_006524004.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000083.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="17"
     gene            1..2379
                     /gene="Tfeb"
                     /gene_synonym="bHLHe35; Tcfeb"
                     /note="transcription factor EB; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 23
                     mRNAs, 34 ESTs, 168 long SRA reads, 38 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 13 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:21425"
                     /db_xref="MGI:MGI:103270"
     CDS             245..1777
                     /gene="Tfeb"
                     /gene_synonym="bHLHe35; Tcfeb"
                     /codon_start=1
                     /product="transcription factor EB isoform X2"
                     /protein_id="XP_006524067.1"
                     /db_xref="GeneID:21425"
                     /db_xref="MGI:MGI:103270"
                     /translation="MLLTLSGLSPLLSLQRAGLAASGYPFHREPEPTAAMASRIGLRM
                     QLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQLGGPPTPAINTPVHFQSPPPVPGE
                     VLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHVSPAQGSPKPAPAASPGVR
                     AGHVLSTSAGNSAPNSPMAMLHISSNPEKEFDDVIDNIMRLDSVLGYINPEMQMPNTL
                     PLSSSHLNVYSGDPQVTASMVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNL
                     IERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELEN
                     HSRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGVNMAELAQQVVKQELPSEDGPGE
                     ALMLGPEVPEPEQMPALPPQAPLPSAAQPQSPFHHLDFSHGLSFGGGGDEGPTGYPDT
                     LGTEHGSPFPNLSKKDLDLMLLDDSLLPLASDPLFSTMSPEASKASSRRSSFSMEEGD
                     VL"
ORIGIN      
        1 cactctgttc tctgggcctg ggctccccct ctgtaataaa gtccccaccc aggcttgctg
       61 ctggagacga gttccttctg gagagtgggt gttctgtgta gttcacaaat cccagataca
      121 gattgaacaa atgaaacaaa tggaatttct gggggcagtc agtacgtgga gggagacccc
      181 aggcgtgggt ccggttggtt gaggcgtctc tggattcact gctgggtgac atcagtcctc
      241 tagtatgctg ctgaccctct ctggtctctc cccactgctg agtctgcaga gagctggtct
      301 ggctgcctct ggatacccat ttcacaggga gcccgaacca acagctgcca tggcgtcacg
      361 catcgggctg cgcatgcagc tcatgcggga gcaggcccag caggaggagc agcgagagcg
      421 catgcagcag caggctgtca tgcattatat gcaacagcag cagcagcagc agcagcagct
      481 gggtgggccc cccaccccag ccatcaacac ccctgtccac ttccagtcgc ccccgcctgt
      541 gcccggggag gtgctgaagg tgcagtccta cctggagaac cccacctcct accacctgca
      601 acagtcccag catcagaagg ttcgggagta tctgtctgag acctatggga acaagtttgc
      661 tgcccacgtg agcccagccc aaggttcccc gaagcctgcc ccagcagcat ccccaggggt
      721 gcgggctgga cacgtactgt ccacctcggc cggcaacagt gctcccaaca gtcccatggc
      781 catgctacat atcagctcca accccgagaa agagtttgat gatgtcattg acaacattat
      841 gcgcctggac agcgtgctgg gctacatcaa ccctgagatg cagatgccta acacgctgcc
      901 cctgtctagc agccacctga acgtgtacag cggtgacccc caggtcacag cctccatggt
      961 gggtgtcacc agcagctcct gccctgccga cctgactcag aagcgagagc taacagatgc
     1021 tgagagcaga gccctggcca aggagcggca gaagaaagac aatcacaacc taattgagag
     1081 aagacgcagg ttcaacatca atgaccggat caaggagctg ggaatgctga tccccaaggc
     1141 caacgacctg gacgtgcgct ggaacaaagg caccatcctc aaggcctctg tggattacat
     1201 ccggaggatg cagaaggacc tgcagaagtc ccgggagctg gagaaccact cccggcgcct
     1261 ggagatgact aacaagcagc tctggctccg catccaggag ctggagatgc aggcacgcgt
     1321 gcacggcctc cccaccacct cgccgtcggg tgtgaatatg gccgagctgg cccagcaggt
     1381 ggtgaagcaa gagttgccca gtgaggatgg cccaggggag gcgctgatgc tggggcctga
     1441 ggtccctgag cctgagcaaa tgccggctct tcctccccag gctccgctgc cctcggccgc
     1501 ccagccacag tctccgttcc atcacctgga cttcagccat ggcctgagct ttgggggtgg
     1561 gggcgacgag gggcccacag gttaccccga taccctgggg acagagcacg gctccccatt
     1621 ccccaacctg tccaagaagg atctggactt aatgctccta gatgactccc tgctccccct
     1681 ggcctctgac cccctctttt ctaccatgtc tcctgaggcc tccaaggcca gcagccgccg
     1741 gagcagcttc agcatggagg agggtgatgt tctgtgacgc tggctgcccc tgtgccaagg
     1801 agcaggggat gcctggaggc tgggaggacc gagcagagcc ctcccatcct tcaggctgca
     1861 cttggtgtga agtagccgcc taccctgcct ctctccttcc ccttggctgc tacccccacc
     1921 ctgtttggac ttagtgcctg cctggcagct gatggggctg gaggagccct ccccctcggc
     1981 ttcgggcccc ctcctctggc ggcagtacta tgactatgat ggggaagaac aggggtgagg
     2041 cagaagagaa ataagaagaa atcctgctag gggagcccct ctcctgagcc tgggctctcc
     2101 tgtggaggac attttggaga aggaggtaca agtacctctg aggcagcagc tggtctgggg
     2161 gtgcccgggc ctgccttcct gggactagat ggcacccagc ctgtcgccct cagcctgaac
     2221 tcccccacaa gtggggcatc cacccccatt tggtgctaac agctctcccc tggtggtatg
     2281 agggtggggt ggccagaaga ggagtctggg ttcagggtgg cgagcacccc cacccccaga
     2341 cctcccactt tgtgccttta gtaaacactg tgctttgta
//
