LOCUS       XM_017318454            2899 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus transcription factor E3 (Tfe3), transcript
            variant X2, mRNA.
ACCESSION   XM_017318454
VERSION     XM_017318454.3
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017318454.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2899
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..2899
                     /gene="Tfe3"
                     /gene_synonym="bHLHe33; F830016E06Rik; mTFE3; Tcfe3;
                     Tfe-3"
                     /note="transcription factor E3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     mRNAs, 31 ESTs, 549 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 40 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:209446"
                     /db_xref="MGI:MGI:98511"
     CDS             330..1628
                     /gene="Tfe3"
                     /gene_synonym="bHLHe33; F830016E06Rik; mTFE3; Tcfe3;
                     Tfe-3"
                     /codon_start=1
                     /product="transcription factor E3 isoform X2"
                     /protein_id="XP_017173943.1"
                     /db_xref="GeneID:209446"
                     /db_xref="MGI:MGI:98511"
                     /translation="MSSSSSRVLLRQQLMRAQAQEQERRERREQAAAAPFPSPAPASP
                     AISVIGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYLSTTLG
                     PKLASQALTPPPGPSSAQPLPAPETAHATGPTGSAPNSPMALLTIGSSSEKELPVSGN
                     LLDVYSSQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRR
                     FNINDRIKELGTLIPKSNDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLE
                     QANRSLQLRIQELELQAQIHGLPVPPNPGLLSLTTSSVSDSLKPEQLDIEEEGRPSTT
                     FHVSGGPAQNAPPQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEGMVGG
                     LSGGALSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES"
ORIGIN      
        1 tcgccctagc cttgcagcca agccggccct gcccactccc tacccacaca ccccctcttc
       61 cttttatttc gccctcccag ccggtctctc agttcccggg tgtaatcttg aatcagtctc
      121 tagagctgga cctgaattct ttgcttccgg aatccgggat tgttgctgat atcgagttag
      181 aaaacatcct cgatcctgac agcttctacg agctcaaaag ccaaccccta tccctccgct
      241 ccagcctccc aatatcactg caggccacac cgaccacccc agctacactc tctgcgtcgt
      301 cttctgcagg gggctcccgg acccctgcca tgtcatcttc ttcatcacgg gtcttgctgc
      361 gtcagcagct tatgagggcc caggctcagg aacaggagag gcgtgagcgg cgggaacagg
      421 cagcggccgc tcccttcccc agccctgcgc ccgcctcacc agccatctct gtgattggcg
      481 tgtctgctgg tggccacaca ctgagtcgtc cacctcctgc tcaggtgccc agggaggtac
      541 tcaaggttca gacccacctc gagaacccta cacgctacca cctgcagcaa gctcgccggc
      601 agcaggtcaa acagtacttg tctaccacac ttgggcccaa gctggcttcc caggctctca
      661 ccccaccacc agggccttcc agtgcccagc cacttcctgc ccctgaaact gctcatgcca
      721 ccggtcctac aggcagtgct cctaacagcc ccatggcgct gctcaccatt gggtccagct
      781 cagaaaagga gctgccggtg tctggaaatc tacttgatgt gtacagcagt cagggagtgg
      841 ctaccccagc tatcaccgtc agcaattcct gtccagctga gctgcctaac atcaaacgcg
      901 agatctccga aaccgaggca aaggcccttt tgaaggagcg acagaagaaa gacaatcaca
      961 acctaattga acgacgcagg cgattcaaca ttaacgatag gatcaaagag ctgggcaccc
     1021 tcatccccaa gtccaatgat ccggagatgc gctggaacaa gggcaccatc ctgaaggcat
     1081 ctgtggatta catccgcaaa ttacagaagg aacagcaacg ctccaaagac ctggagagcc
     1141 ggcagcggtc cctggaacaa gccaaccgaa gcctgcagct ccggattcag gagctagaac
     1201 tgcaggccca gatccatggt ctgccagtcc ctcccaaccc aggactgctc tccctaacca
     1261 cgagttcggt ctctgacagc ctcaagccag aacagctgga cattgaggag gagggcaggc
     1321 ctagcacaac gttccatgta tcgggaggac ctgcccagaa cgctcctcca caacagcctc
     1381 cagcaccacc ttcggatgcc cttctggacc tacactttcc cagcgaccac ttgggagacc
     1441 tgggggaccc cttccaccta gggctagagg acattctgat ggaggaggag gggatggtgg
     1501 gaggactgtc agggggtgcc ctgtccccac tgcgggctgc ttctgacccc ctgctttctt
     1561 cagtatcccc ggctgtttcc aaggccagca gccgccgtag cagcttcagc atggaagagg
     1621 agtcctgatc aggcctcact cctccccctg gatgagaccc tgcctttttt ccctaccctc
     1681 ctgtgagact gtcctgtcca ggaaatctgg gggaagagga gttgcaatca ggccccaacc
     1741 ctgtaatagg caaggaggag gaatcaggtg aggccctgcc ccctttccat tcgtggggaa
     1801 gaaggcagga gagagctggg aaatcacagt tcatcacttg agcatcatag ccttacccct
     1861 cgcccctggt cctactcctg cctcggtgat agaaggaggc agggtaaggg tatgcccctg
     1921 gccactagag atccttagaa acaggtctct gaaggaaagg agatgccagg atgctactcc
     1981 attccttctc tgggaattgc cagtccaact tttcctggca ctggaagaaa aaaaataagt
     2041 gtcccacccc tggagggtta atccctatct cttccttttg acccctgact tgttctggca
     2101 aggaacagaa gtaagggtgt gatccagccc gtccccctgg gacccatccc ttctctatag
     2161 gaaaagctca gcgcaggtat tacaggtatg gaggaattac taggctctga tctcccatgt
     2221 agaggcccca gtcctaaccc tgacccttag caggacaccg tgcaagcatt ccattcggca
     2281 gggaggatca gttccttagc tccctgcctt aacctaggac caacctggga cctgacctgt
     2341 gaggactctg tgctgacctt attcttgggg aagggaacag attttgacct agatcaagtg
     2401 taacttaggt cctcaccctt gggacgacct tgccttttct gccttgaggg gcagttttgg
     2461 gagatgaaag ggattagtgt ggacccagtc taggcacccc agtacttccc ttcaccttgt
     2521 agaaaatggt aatgaaaggg catgcccagg ctctttagca gcccagggaa acagagaagt
     2581 ctcccttaaa ggcagggcct gggaggaatg gtggcaaagg tataatgtat ccgtgttttg
     2641 tttgtgaatt ttttattgaa cccacccact cagatgctaa gtcaaccctg acctctgccc
     2701 catccacacc attctccatt cgagagacta cccctgtttc agagccagtc cccacctagt
     2761 cccgtccctg ccacctacac ccaaggtctt cagctttaag ttgctggggc caggccccga
     2821 ggagggttta ctgaggggtc tgtaggtttg actaaaataa taaatgctag gcgtgtttga
     2881 tgcgctttta actttggca
//
