LOCUS       NM_001177347             380 bp    mRNA    linear   ROD 04-OCT-2024
DEFINITION  Mus musculus testis expressed 54 (Tex54), mRNA.
ACCESSION   NM_001177347 XM_897786 XM_920535
VERSION     NM_001177347.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Hong,S., Choi,I., Woo,J.M., Oh,J., Kim,T., Choi,E., Kim,T.W.,
            Jung,Y.K., Kim,D.H., Sun,C.H., Yi,G.S., Eddy,E.M. and Cho,C.
  TITLE     Identification and integrative analysis of 28 novel genes
            specifically expressed and developmentally regulated in murine
            spermatogenic cells
  JOURNAL   J Biol Chem 280 (9), 7685-7693 (2005)
   PUBMED   15613475
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC025794.9.
            
            On or before Apr 7, 2010 this sequence version replaced
            XM_920535.2, XM_897786.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB273815.1, BY086649.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-129               AC025794.9         203489-203617
            130-380             AC025794.9         203746-203996
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 5.44 cM"
     gene            1..380
                     /gene="Tex54"
                     /gene_synonym="1700092M07Rik"
                     /note="testis expressed 54"
                     /db_xref="GeneID:74307"
                     /db_xref="MGI:MGI:1921557"
     exon            1..129
                     /gene="Tex54"
                     /gene_synonym="1700092M07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..311
                     /gene="Tex54"
                     /gene_synonym="1700092M07Rik"
                     /codon_start=1
                     /product="testis-expressed protein 54"
                     /protein_id="NP_001170818.1"
                     /db_xref="CCDS:CCDS50382.1"
                     /db_xref="GeneID:74307"
                     /db_xref="MGI:MGI:1921557"
                     /translation="MGCCQDKNRWASDEQARDEVTEDGREGNEVDNSGRRKQRSNESL
                     LITVLWRRLSMFSRRESSRSGKQDNQMQERKHEGSHKEPEKG"
     exon            130..380
                     /gene="Tex54"
                     /gene_synonym="1700092M07Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      348..353
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tex54"
                     /gene_synonym="1700092M07Rik"
                     /note="hexamer: AATAAA"
     polyA_site      380
                     /gene="Tex54"
                     /gene_synonym="1700092M07Rik"
                     /note="major polyA site"
ORIGIN      
        1 agagctaggc tggctgggga gggtgacaga gtcctgcgcc tttcggggcc atgggctgct
       61 gtcaggacaa gaaccgttgg gcctcggatg agcaagcaag ggatgaagta acagaggatg
      121 gcagggaagg caacgaagtg gacaactcag gccgccgtaa acaaagatct aacgaaagtc
      181 tcctgatcac cgtgctgtgg cgcaggctat ccatgttcag ccgtcgggag tcctcgcggt
      241 caggcaagca ggacaatcag atgcaggaac gcaaacatga gggaagccac aaggaaccag
      301 aaaaaggctg actacaaccc tggtcttagt cctccccaac accagagaat aaagttaata
      361 ttgcgaatct gctgaaaaca
//
