LOCUS       NM_001355740            3119 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus testis expressed gene 10 (Tex10), transcript variant
            2, mRNA.
ACCESSION   NM_001355740 XM_006537955
VERSION     NM_001355740.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3119)
  AUTHORS   Xiang,X., Kuang,W., Yu,C., Li,Y., Su,Q., Tian,Y. and Li,J.
  TITLE     Tex10 interacts with STAT3 to regulate hepatocellular carcinoma
            growth and metastasis
  JOURNAL   Mol Carcinog 62 (12), 1974-1989 (2023)
   PUBMED   37792308
  REMARK    GeneRIF: Tex10 interacts with STAT3 to regulate hepatocellular
            carcinoma growth and metastasis.
REFERENCE   2  (bases 1 to 3119)
  AUTHORS   Ding,J., Huang,X., Shao,N., Zhou,H., Lee,D.F., Faiola,F.,
            Fidalgo,M., Guallar,D., Saunders,A., Shliaha,P.V., Wang,H.,
            Waghray,A., Papatsenko,D., Sanchez-Priego,C., Li,D., Yuan,Y.,
            Lemischka,I.R., Shen,L., Kelley,K., Deng,H., Shen,X. and Wang,J.
  TITLE     Tex10 Coordinates Epigenetic Control of Super-Enhancer Activity in
            Pluripotency and Reprogramming
  JOURNAL   Cell Stem Cell 16 (6), 653-668 (2015)
   PUBMED   25936917
  REMARK    GeneRIF: Tex10 is a core component of the pluripotency network.
REFERENCE   3  (bases 1 to 3119)
  AUTHORS   Fanis,P., Gillemans,N., Aghajanirefah,A., Pourfarzad,F.,
            Demmers,J., Esteghamat,F., Vadlamudi,R.K., Grosveld,F.,
            Philipsen,S. and van Dijk,T.B.
  TITLE     Five friends of methylated chromatin target of
            protein-arginine-methyltransferase[prmt]-1 (chtop), a complex
            linking arginine methylation to desumoylation
  JOURNAL   Mol Cell Proteomics 11 (11), 1263-1273 (2012)
   PUBMED   22872859
  REMARK    GeneRIF: Recruitment of the protein complex 5FMC to Zbp-89, a
            zinc-finger transcription factor, affects its sumoylation status
            and transactivation potential.[5FMC]
REFERENCE   4  (bases 1 to 3119)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   5  (bases 1 to 3119)
  AUTHORS   Morgan,D., Turnpenny,L., Goodship,J., Dai,W., Majumder,K.,
            Matthews,L., Gardner,A., Schuster,G., Vien,L., Harrison,W.,
            Elder,F.F., Penman-Splitt,M., Overbeek,P. and Strachan,T.
  TITLE     Inversin, a novel gene in the vertebrate left-right axis pathway,
            is partially deleted in the inv mouse
  JOURNAL   Nat Genet 20 (2), 149-156 (1998)
   PUBMED   9771707
  REMARK    Erratum:[Nat Genet 1998 Nov;20(3):312]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ082426.1, AK141288.1, CA539714.1 and DV645036.1.
            
            On Sep 26, 2017 this sequence version replaced XM_006537955.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK141288.1, BC151176.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-220               CJ082426.1         10-229
            221-497             AK141288.1         195-471
            498-498             CA539714.1         476-476
            499-3098            AK141288.1         473-3072
            3099-3119           DV645036.1         152-172
FEATURES             Location/Qualifiers
     source          1..3119
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 26.13 cM"
     gene            1..3119
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /note="testis expressed gene 10"
                     /db_xref="GeneID:269536"
                     /db_xref="MGI:MGI:1344413"
     exon            1..198
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            199..387
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             208..2994
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /note="isoform 1 is encoded by transcript variant 2; clone
                     18330; testis-expressed sequence 10 protein;
                     testis-expressed protein 10"
                     /codon_start=1
                     /product="testis-expressed protein 10 isoform 1"
                     /protein_id="NP_001342669.1"
                     /db_xref="CCDS:CCDS38760.1"
                     /db_xref="GeneID:269536"
                     /db_xref="MGI:MGI:1344413"
                     /translation="MTKKRKRQDDFQKVKLKVGKKKPKLENATATNFKTKAIHLPEQL
                     KEDRTLPTNNRKLNIKDLLSQMHHYSGGVKQSALLGLKDLLSQYPFIIDAHLSNILSE
                     VTAVFTDRDANVRLAAVQLLQFLAPKIRTEHISPFFPLVSAHLSSAMTHITEGIQEDS
                     LKVLDILLEHYPALITGRSSILLKNFVELISHQQLSKGLVNRDRSQSWILSVNPNRRV
                     TSQQWRLKVLARLSKFLQALADGSSRLRESEGLQEQKETPHATSNSIFINWKDHANDQ
                     QQIQVYENGGSQPNVSSQFRLRCLGTLGTVDEDLSSPENLKGFIEIIIPLLIECWIEA
                     LPPQLAASVGSGVEREPLQVMQQVLNVISLLWKLSKQQDETHTLESWLRKNYLTDFKH
                     HFMSHFPYALKEITKQRKKDTNKSIKHCTVLSNNVDHLLLNLTLSDIMVSLANASTLQ
                     NDSSWIETIRKFVTETLKGGTRLNSKQLNRLLGVSWRLIQMQPNRDATENLIKAVYTL
                     YQQRGLLLPVRTLLIKFFSKIYQKEELRSYRLRYRSKVLSRWLAGLPLQLSYLGSRNP
                     ELSTQLIDIIHTAASQANKDLLKNLQAAALRIYDPQEGAVVVLPAESQQRLVQLLYFL
                     PTLPADLLSQLSRCCIMGRLGSSLAVTLIGILYMRSSFSGWSHSVNDCLMTDVDYLSF
                     LFSTLTGFSKEELTWLQNLRGVPHVVQTSLSPVLLYLTDLDQFLHHWDITEAVCHSLL
                     VIPARSQSFDIMQSAISKHLVGLTVIPDSTAGCIFGVMCKLLDHTCVVNEALLPFLAS
                     CCYSLLYFLLTLEKGDAEHLKKRDKLWEVCVSILALLPRVLRLMLQSLRVNRASPEEL
                     PVVGQLLRLLLQHVPLRSHMLTNAILVQQIIKNITTLKSGSVQEQWLTDLHYCFSVYI
                     SGHPQGPSILNALY"
     exon            388..1100
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1101..1341
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1342..1454
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1455..1693
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1694..1829
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1830..2005
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2006..2183
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2184..2272
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2273..2406
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2407..2487
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2488..2669
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2670..2880
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            2881..3106
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3084..3089
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      3106
                     /gene="Tex10"
                     /gene_synonym="2610206N19Rik; 2810462N03Rik"
                     /note="major polyA site"
ORIGIN      
        1 gtgagcgcgg cgagggaggg cccccacttc cgggcggcgg aaggagacgc gtccgcgtga
       61 ggacgaggcg atttgaaaac acgctctggg agcgagcgga aagcctgcgg ccggcggttc
      121 acggcgtgct cctgcggggc ttgacggtcg ctcgctctcc gccgcgtctc cgcgttccgg
      181 gtccgtccgg gctctcagca ttaaagaatg accaaaaaaa ggaaacgcca agatgatttt
      241 cagaaagtaa aactaaaagt tggtaaaaag aagcccaagt tagaaaatgc tacagctaca
      301 aactttaaga caaaggctat acatttgcct gaacaactta aagaggatag aacacttccg
      361 acaaacaata gaaagcttaa cataaaggat ttgctgtcac agatgcatca ctatagtggt
      421 ggtgttaaac aaagtgctct tcttggactt aaagaccttt tgtctcaata cccatttata
      481 attgatgcac acctctcaaa catattaagt gaagtgactg ctgtgtttac agatagagat
      541 gctaatgtac ggttagcagc agttcaactt cttcaattcc tggcccccaa aatacgaact
      601 gaacacattt ctccattttt tcctttggta agtgcccatc tctctagtgc catgactcac
      661 attactgaag gaattcagga ggactcttta aaagttctgg acattctgct ggagcattat
      721 ccagctctca ttactggccg tagcagtata ttgcttaaga actttgtaga actcatttct
      781 catcagcagc tgtccaaagg actggtaaat agagacagat cccagtcttg gatactttct
      841 gtaaatccta atcggagagt cacttctcag caatggaggc tgaaagtctt agcaagactc
      901 agtaaattcc ttcaggcctt ggcagatgga tccagtaggt tgagagaaag tgaaggactt
      961 caggaacaaa aagaaactcc ccatgccact agcaactcca tttttatcaa ctggaaggat
     1021 catgccaacg accagcaaca gatccaggtt tatgaaaatg ggggttcaca gccaaatgtc
     1081 agttcacagt tcaggctacg gtgcttggga acactaggca ctgtggatga agacctgtca
     1141 tcccctgaaa acctgaaagg attcattgag ataataattc cattgttaat tgaatgctgg
     1201 attgaagctt tacctccaca actagcagct tctgttggga gtggggttga gcgagagcct
     1261 ctgcaggtta tgcagcaagt cctgaatgtc atttcactgt tgtggaaact ctcgaagcag
     1321 caggatgaaa cccatacgtt ggagtcatgg cttcgaaaaa attatcttac tgatttcaaa
     1381 catcatttta tgagtcattt tccatatgcc ttaaaagaaa taaccaagca acggaagaaa
     1441 gatacaaata aaagcatcaa gcattgcaca gttctctcca ataatgtaga tcatctttta
     1501 ctgaacttaa cactgtctga tatcatggtc tcgctggcaa atgcttcaac cttacagaat
     1561 gattccagtt ggatagaaac aataaggaag tttgtgacgg agacccttaa aggtggcact
     1621 agattgaaca gtaagcagct gaacaggctg cttggagtct cttggaggct aatccagatg
     1681 caaccaaaca gagatgctac agagaatctc attaaggcag tttatacact gtatcaacag
     1741 aggggcctgc ttcttccagt taggactttg ttaatcaaat ttttcagtaa gatctatcag
     1801 aaagaagaat tgaggtctta cagattgaga taccgaagca aagtgctctc ccgttggctg
     1861 gccggcttgc cattgcagct ctcttacctt ggctcccgaa accctgagct ctccacacag
     1921 ctgattgata ttattcacac tgctgcatca caagcaaata aggacttatt gaaaaactta
     1981 caagctgccg ctctacgaat ttatgatcct caagaaggcg ctgtggtagt tcttcctgca
     2041 gagtctcagc aacgtctagt tcagctgttg tattttctcc ccactctgcc tgctgatttg
     2101 ctttctcagc taagtcggtg ctgcataatg ggaagactcg gctcaagttt ggctgtcacg
     2161 cttattggga tactgtacat gagatcatct ttttctggat ggagtcactc ggttaatgac
     2221 tgcttaatga ctgatgtgga ttatctcagc ttcttatttt ctacacttac agggttttca
     2281 aaagaggagt tgacctggct tcagaacctt cgaggcgttc ctcatgtcgt ccagacatca
     2341 ctttcccctg tgcttctcta ccttacagat ttagaccagt tcttgcacca ctgggacata
     2401 acagaggcag tttgtcacag cttattggtt attcctgccc gaagccagag ctttgacatc
     2461 atgcagagtg ccatcagtaa gcatttggtt gggttgactg taattcctga cagcacagct
     2521 ggctgtatat ttggagtgat gtgtaagctc ctggatcata catgtgtagt taatgaagct
     2581 ctcctgccat tcctggcttc ttgttgctac agccttcttt attttctgct tactctagag
     2641 aaaggagatg cagaacatct gaaaaagagg gacaaactgt gggaggtctg tgtctccatc
     2701 ctggctctcc tgcctagagt cctcaggttg atgctgcaga gtctacgggt gaacagagct
     2761 tctcctgagg agctgcctgt tgtaggccag ctgcttcgcc tgctgcttca gcatgtgcct
     2821 cttaggtcgc acatgctgac taatgccatc ctagtgcagc agatcatcaa gaatatcacg
     2881 actttaaaga gtggcagtgt tcaggagcag tggcttacag acttacatta ctgcttcagc
     2941 gtgtacatca gtggccatcc ccaagggcct agtatattga atgcattgta ttaaagaagc
     3001 accatggtac ctcctgtttg aagttaattg ttcatgcaca ttcattttat tttgaagaaa
     3061 gactgatgta acagatgttt gccattaaac ctcaactttt aaagaaaaaa aaaaaaaaa
//
