LOCUS       XM_006534512            2922 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TEPSIN, adaptor related protein complex 4
            accessory protein (Tepsin), transcript variant X1, mRNA.
ACCESSION   XM_006534512
VERSION     XM_006534512.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006534512.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2922
                     /gene="Tepsin"
                     /gene_synonym="2410002I01Rik; Enthd2"
                     /note="TEPSIN, adaptor related protein complex 4 accessory
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 13 mRNAs, 12 ESTs, 354 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 29 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:78777"
                     /db_xref="MGI:MGI:1926027"
     CDS             253..1923
                     /gene="Tepsin"
                     /gene_synonym="2410002I01Rik; Enthd2"
                     /codon_start=1
                     /product="AP-4 complex accessory subunit tepsin isoform
                     X1"
                     /protein_id="XP_006534575.1"
                     /db_xref="GeneID:78777"
                     /db_xref="MGI:MGI:1926027"
                     /translation="MIASHVQATCLKRSPVSFCTVPIEISHESLGSSQCLLEYLLNRL
                     DSSSGHVKLKVLKILLYLCGHGSSSFLLILRRNSALIQEATAFSGPPDPLHGNSLYQK
                     VRAAAQDLGSTLFSDAVPQPPSQPPQIPPPAGMGAQARPLSALQGFGYTKESSRTGSA
                     GETFLSTIQRAAEVVANAVRPGPDNPCTKGPLPYGDSYQPAVTPSASHTHPNPGNLLP
                     GAILGARAVRHQPGQAGGGWDELDSSPSSQNSSCTSNLSRASDSGSRSGSDSHSGTSR
                     EPGDLAERAEATPPNDCQQELNLVRTVTQGPRVFLSREETQHFIKECGLLNCEAVLEL
                     LLRQLVGTSECEQMRALCAIASFGSADLLPQEHVLLLCRQQLQELGAGSPGPVTNKAT
                     KILRHFEASCGQQLPTLRLCAQPNSAAAPVGPADLLTSPVPAPGSQVFLQPLSSATVV
                     PRSPVLFPSPNTLPPSALEEPSEVRTQLVCSSEQGTESEQRLENTDTPEDSSSPLPWS
                     PNSLFAGMELVACPRLPCHSSQDLQTDLQKVTTEAPVSEPSAFAFLNM"
ORIGIN      
        1 taattggtcg ccgttcttgt ccgtctcttg ctgagacttt ggattggctg agacgcagat
       61 gttcccgcct tcgtgcccgc cccttgcgag cgattggtcg ggggagcgag aggagcgcga
      121 cgattggagg atcgaagcct ggcggaagcg gggcagtttg ggaggttacc tggaccatgg
      181 cagctgtgcc gcccctgcgg gaccgcttga gcttcttgca taggctcccc atcctgttga
      241 aggggacctc agatgatagc atcccatgtc caggctacct gtttgaagag atcgccagta
      301 tccttctgca ctgttcccat tgagatttcc cacgagtcac taggcagcag ccagtgcctg
      361 ctggagtacc tcctgaaccg tctggacagc agctccggcc acgtgaagct caaggtgcta
      421 aagatcttgc tttacctgtg tggtcatggc tcttcctcct tcctcctcat cctcaggaga
      481 aactctgctc tcatccaaga agccacggct ttctcagggc ctccagatcc tcttcacgga
      541 aatagcttgt accagaaggt gcgggcggct gcccaggacc tgggtagcac cctgttctca
      601 gatgccgtgc cacagcctcc atcgcagcca cctcagatcc cgcctcccgc aggcatgggc
      661 gcccaggcca gacctcttag tgccctgcaa ggcttcggct acacgaagga gagcagccgg
      721 acaggctccg caggtgaaac cttcctctcc accatccaga gggccgcaga ggtagtggct
      781 aatgctgtgc gtcctggacc tgataatcct tgtaccaagg gacccttgcc gtatggtgat
      841 tcctaccagc ctgcagtgac accttcagct agccacacac atcccaaccc tgggaatcta
      901 ctccctgggg ccatcctggg ggccagagct gtgagacacc agcccgggca ggctgggggc
      961 ggctgggatg agctggacag cagtcctagt tcccagaatt cctcctgcac cagcaacctg
     1021 agcagggcct cggactcggg cagtcggtct ggcagtgaca gccactctgg caccagccgg
     1081 gagccaggcg acctggcaga aagggctgag gccacgcccc caaatgactg ccagcaagaa
     1141 ctgaatctag tgaggactgt gacacagggg ccacgtgtct tcctgagccg tgaggagacg
     1201 cagcacttca tcaaagagtg tggcctgctc aactgtgagg cagtgctgga gctgctcctg
     1261 cgccagctgg tcgggaccag tgagtgcgag cagatgaggg cgctgtgtgc catcgcgtcc
     1321 tttgggagtg ctgacctcct gcctcaggag cacgtcctcc tcctgtgccg acagcagctg
     1381 caggaacttg gcgcgggcag ccctggacct gtgaccaaca aagccaccaa gatcctgaga
     1441 cattttgaag cctcctgtgg acaacagctc cctaccctaa ggctctgtgc ccagcccaac
     1501 tctgcagctg cccctgtggg cccagctgac ctgctgacca gccccgtgcc tgcccctggg
     1561 agccaggtct tcctccagcc tctcagctcc gccacagtgg tacccaggag tcctgtgctc
     1621 tttccatccc ccaatacctt acctccgtct gctctggagg agcccagcga ggtccgaacc
     1681 caattggtgt gttctagtga acaggggaca gaatctgagc agaggctgga gaacacagac
     1741 accccagagg atagctccag tccgctcccg tggagtccca actctttgtt tgctggcatg
     1801 gagctggtgg cttgcccccg cctgccttgc cacagctcgc aggacctcca gacagattta
     1861 cagaaggtga ccacagaagc tccggtttca gagccatcag cttttgcatt tttaaacatg
     1921 tgactttctg ggcccagctg tacagcgtcc cctctggtcc tcatataaaa ggccccagga
     1981 ccttatggtc tcctgtcctc gtgttcacca aggagccatc ctttggtgtc ctctggctgt
     2041 cccttcgccc tctggcccct tcctttcaac taggaaactg gtacagcggc ctttgagcca
     2101 ggtgagccct ggatgggcct cccagtgctc agaacagtca ctgaagaagg gatctgggcc
     2161 cttagtgctg accagccaac atggaggtgt ggaaaataca gtcaactggt gcctcagaag
     2221 atgtccgcac acccattgct tcttgggaat tgactctgag actggcttct ctcttcctcc
     2281 cagcaagacc cacacagacc ttcttagcgg tctgtccata gctggagacc accttgtaca
     2341 tctgcagggc aggacgtccc cagggctgtc gaccacagcc cctccgcccc atgctgctct
     2401 gtccctagga ggctgaacac tgactacaac tcccaccccc aactcccagg ctacctcagt
     2461 cccagttgga cctgtcccat tgctaggtgc tggcaatgat tgtatggact tgaattccta
     2521 tggtgacagc tggccagtag caaggctgcc gggctgacct tgggtaccct gggcaagccc
     2581 tgtgggcctg accctcagaa atgagcactt gagagggttg gaaacaccaa cttggctcac
     2641 agttaggttc tgatctctgg tccttcctct gggaggtcaa agtagctggg agccacagcc
     2701 ttgaggatag gggggctggg cgggtacctt tggttctcag agtttcctca gacaagtgcc
     2761 ctgtggccgt ttccagtgtc agtcactgta gggcccagcg ctggatgcca gcttgccaca
     2821 gttttctgta ggacacggga gagagtcgtc ccatctcaga agaacctgtg gagatgcaat
     2881 gtgcactttc tcaataaaca catgtttaca ctgcttgtgc ca
//
