LOCUS       NM_001014836             695 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Mus musculus tektin bundle interacting protein 1 (Tektip1), mRNA.
ACCESSION   NM_001014836 XM_483925
VERSION     NM_001014836.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 695)
  AUTHORS   Tai,L., Yin,G., Huang,X., Sun,F. and Zhu,Y.
  TITLE     In-cell structural insight into the stability of sperm microtubule
            doublet
  JOURNAL   Cell Discov 9 (1), 116 (2023)
   PUBMED   37989994
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 695)
  AUTHORS   Chen,Z., Shiozaki,M., Haas,K.M., Skinner,W.M., Zhao,S., Guo,C.,
            Polacco,B.J., Yu,Z., Krogan,N.J., Lishko,P.V., Kaake,R.M.,
            Vale,R.D. and Agard,D.A.
  TITLE     De novo protein identification in mammalian sperm using in situ
            cryoelectron tomography and AlphaFold2 docking
  JOURNAL   Cell 186 (23), 5041-5053 (2023)
   PUBMED   37865089
REFERENCE   3  (bases 1 to 695)
  AUTHORS   Zhou,L., Liu,H., Liu,S., Yang,X., Dong,Y., Pan,Y., Xiao,Z.,
            Zheng,B., Sun,Y., Huang,P., Zhang,X., Hu,J., Sun,R., Feng,S.,
            Zhu,Y., Liu,M., Gui,M. and Wu,J.
  TITLE     Structures of sperm flagellar doublet microtubules expand the
            genetic spectrum of male infertility
  JOURNAL   Cell 186 (13), 2897-2910 (2023)
   PUBMED   37295417
REFERENCE   4  (bases 1 to 695)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   5  (bases 1 to 695)
  AUTHORS   Bleul,C.C. and Boehm,T.
  TITLE     Laser capture microdissection-based expression profiling identifies
            PD1-ligand as a target of the nude locus gene product
  JOURNAL   Eur J Immunol 31 (8), 2497-2503 (2001)
   PUBMED   11500834
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU945663.1 and BC145960.1.
            
            On Oct 6, 2007 this sequence version replaced NM_001014836.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC139256.1, BU945663.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4                 BU945663.1         4-7
            5-695               BC145960.1         1-691
FEATURES             Location/Qualifiers
     source          1..695
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 39.72 cM"
     gene            1..695
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /note="tektin bundle interacting protein 1"
                     /db_xref="GeneID:432479"
                     /db_xref="MGI:MGI:1921072"
     exon            1..117
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..655
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /note="uncharacterized protein C19orf71 homolog"
                     /codon_start=1
                     /product="tektin bundle-interacting protein 1"
                     /protein_id="NP_001014836.2"
                     /db_xref="CCDS:CCDS24056.1"
                     /db_xref="GeneID:432479"
                     /db_xref="MGI:MGI:1921072"
                     /translation="MENVRREATRPSVPSGTLELYFPDHLYRNDYVSLEGPRWAPAIK
                     QAVRWKFTPMGRDAAGQVWFTGLTNSEPGDAWYKLPRALDTPYREAHTRWHGCFQSRQ
                     RGLPPAYTQHLREMAFWDPAITAQYLNSGPRWGCMQWRDRQIRGKEFVVTRNQFGAKL
                     PWRSDYVPLLSLPQRPRFTAQDFRQRGLQRPCPAIGQPPPAFTPAL"
     exon            118..356
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            357..482
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            483..695
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      654..659
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /note="hexamer: GATAAA"
     polyA_site      672
                     /gene="Tektip1"
                     /gene_synonym="2210409H10Rik; 4930404N11Rik;
                     5730551K18Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggtgactaga gcctctgggc aggcagggcc agacatggaa aacgtgaggc gggaggctac
       61 tcggccctct gttccctcag gcacccttga actctacttc cccgaccatc tctaccgcaa
      121 tgactacgtg tccctggagg ggccccgttg ggcgccggcc atcaaacaag ccgtgcgctg
      181 gaaattcacg cccatgggac gggatgcggc cggccaggtg tggttcaccg gcctgaccaa
      241 ctcagaacct ggtgatgcct ggtacaagct gccccgtgct cttgacactc cgtaccgcga
      301 ggcccacacg cgttggcacg gctgctttca gagtcgccag cgtggcctgc cgcccgccta
      361 cacacagcac ttgcgggaga tggccttctg ggaccccgcg ataaccgcgc agtatctcaa
      421 ctcaggcccg cgctgggggt gcatgcagtg gagggacagg caaatccgtg gcaaggagtt
      481 cgtggtcacc aggaaccagt tcggggcaaa gctgccctgg cggtccgact atgtgccgct
      541 cctgtcgctg ccacagcggc cgcgcttcac cgcgcaggac ttcagacagc ggggcctgca
      601 gcggccctgc ccggccatcg gccagcctcc tccggctttc acacccgcgc tctgataaag
      661 ccgtgctacc gacccgtgtg tccgtgtccc cgtaa
//
