LOCUS       NM_178244               1329 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus transmembrane epididymal protein 1A (Teddm1a), mRNA.
ACCESSION   NM_178244
VERSION     NM_178244.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1329)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC099702.12.
            
            On Jul 6, 2022 this sequence version replaced NM_178244.3.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AJ554212.1, BC141345.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1329              AC099702.12        135165-136493       c
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="1"
                     /map="1 65.43 cM"
     gene            1..1329
                     /gene="Teddm1a"
                     /gene_synonym="e9-1; Epdd1; Teddm1"
                     /note="transmembrane epididymal protein 1A"
                     /db_xref="GeneID:240819"
                     /db_xref="MGI:MGI:2668439"
     exon            1..1329
                     /gene="Teddm1a"
                     /gene_synonym="e9-1; Epdd1; Teddm1"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..975
                     /gene="Teddm1a"
                     /gene_synonym="e9-1; Epdd1; Teddm1"
                     /note="epididymal protein e9-1; transmembrane epididymal
                     protein 1-1"
                     /codon_start=1
                     /product="transmembrane epididymal protein 1A"
                     /protein_id="NP_839975.2"
                     /db_xref="CCDS:CCDS15380.1"
                     /db_xref="GeneID:240819"
                     /db_xref="MGI:MGI:2668439"
                     /translation="MGDFIGHISPGLFLVFYGLYQAVIVSRAVIFNDSLLYPSYLSKN
                     KGKWARLWKIAHAGWLKVVIGSLLIVYEISCVKEGLTLMTKGVPPRFMYPKEWQHLTM
                     FFLLTLDGCVEMVSKNMLRQRCVLLERGATVLGVYVLLLLLVSHVKESSGVELQVHSL
                     LILVVFLLMLVLTAELWAPEMFHLWMIETFLILIMGSWLIQAAFILFRPVSGFPWEDD
                     DISDIMFVTTFFCWHVMINALCMLGIYGVSSFWHRCYSPSLRLMGSKEALYQESSSGT
                     FYKLLQEAEQQDKDDQAPLLSKISPCDRA"
     regulatory      1306..1311
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Teddm1a"
                     /gene_synonym="e9-1; Epdd1; Teddm1"
                     /note="hexamer: AATAAA"
     polyA_site      1329
                     /gene="Teddm1a"
                     /gene_synonym="e9-1; Epdd1; Teddm1"
                     /note="major polyA site"
ORIGIN      
        1 gcccagacct tgcagcctgt gtatccgagt tttacacctt gttagactca tagctcaatg
       61 ggagacttta ttggccatat atctccaggc ttgtttctgg tcttctatgg tctgtatcaa
      121 gcagtaatag tctccagagc tgtgatattc aatgactctc ttctgtatcc ttcctacctt
      181 tccaagaata aggggaaatg ggcccggctg tggaaaatag cccatgcagg ctggttgaag
      241 gttgtgatcg gctccctctt gatcgtttat gagatcagtt gtgttaaaga agggctgaca
      301 ttaatgacca aaggggtgcc accaaggttt atgtacccca aggagtggca gcacctcacc
      361 atgttcttcc ttctcaccct tgatggctgt gtagaaatgg tgagcaagaa catgctacgg
      421 cagaggtgtg tgctcctaga aagaggtgcc acggtcctgg gtgtctacgt gctgctcctg
      481 ctgctagtgt ctcacgttaa agaatcatct ggggtggagc tgcaggttca ctctctcctc
      541 atcttggtgg tgttcctgct gatgctggtg ttgacggcag agctctgggc tcctgagatg
      601 tttcacctct ggatgataga gaccttcctg atcctgataa tgggctcgtg gctgattcag
      661 gcagccttca ttctctttag accagtctct ggcttcccat gggaggatga tgacatcagt
      721 gacatcatgt ttgtcaccac cttcttctgc tggcatgtga tgatcaatgc cttatgcatg
      781 ttgggaatct atggtgtctc ttccttttgg caccgttgtt acagtcccag cttgaggctg
      841 atggggtcca aggaagcgct gtatcaggag agctcttcag gaaccttcta caagctgctg
      901 caggaggcag agcagcagga caaagatgac caggctcctc tcctttcaaa gatctctccc
      961 tgtgaccggg cctagaatac ctgggcatat acaccgcccc atcttcctcc tgtgggctct
     1021 cctgggcact tgcagtgcaa cctttgctcc ttggtgaagg caatggccct ggaggatggc
     1081 agtttgtgct ccttgtctct gagcctgcag ttaatgctga ggagaagaga cccaagcgtg
     1141 atgggacttg agaagaggga gggaagaaga gtgggggaca gttctacatg caggcaaaga
     1201 gagagagtga aacaatggcg ttaaagagag gaatctctgc tcaagcccag aattctgcac
     1261 tcagcgctgt ttctctgagg caccaccgaa tgcttcacct gagggaataa agattcctca
     1321 cagctcaaa
//
