LOCUS       NM_001034860            1810 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus TD and POZ domain containing 8 (Tdpoz8), transcript
            variant 2, mRNA.
ACCESSION   NM_001034860 XM_143394 XM_884316 XM_904136 XM_918690
VERSION     NM_001034860.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK139723.1.
            
            On Apr 5, 2007 this sequence version replaced NM_001034860.1.
            
            Transcript Variant: This variant (2) uses an alternate splice
            pattern and begins translation at a downstream start codon. The
            resulting isoform (2) has a shorter and distinct N-terminus,
            compared to isoform 1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK139723.1, BY725651.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1810              AK139723.1         2-1811
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.14 cM"
     gene            1..1810
                     /gene="Tdpoz8"
                     /gene_synonym="EG229571; Gm4858"
                     /note="TD and POZ domain containing 8"
                     /db_xref="GeneID:229571"
                     /db_xref="MGI:MGI:3645677"
     exon            1..122
                     /gene="Tdpoz8"
                     /gene_synonym="EG229571; Gm4858"
                     /inference="alignment:Splign:2.1.0"
     exon            123..225
                     /gene="Tdpoz8"
                     /gene_synonym="EG229571; Gm4858"
                     /inference="alignment:Splign:2.1.0"
     CDS             204..938
                     /gene="Tdpoz8"
                     /gene_synonym="EG229571; Gm4858"
                     /note="isoform 2 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="TD and POZ domain containing-like isoform 2"
                     /protein_id="NP_001030032.1"
                     /db_xref="CCDS:CCDS38523.1"
                     /db_xref="GeneID:229571"
                     /db_xref="MGI:MGI:3645677"
                     /translation="MNRNCATAQVLTPDDKFTVLCKVSVLQDSFSISGQNPRPAIKVT
                     RCALEDDVGELWENSLFTDCCLLVAGHEFRAHKVILAARSPVFRAMFEHEMKVRLTNR
                     VEIHDLDPQVFKEMMGFIYTGKASHLHSYSMASDVLAAADRCGLKGLKVMCEDALCRN
                     LSVENAAHTLILADLHSIEHLKIQALDFITVYASEVSKTSGWMSMRESHPHLVAQAFH
                     SLASTHRIFGALPFKQLKWSLRPTQL"
     exon            226..1810
                     /gene="Tdpoz8"
                     /gene_synonym="EG229571; Gm4858"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1789..1794
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tdpoz8"
                     /gene_synonym="EG229571; Gm4858"
                     /note="putative"
     polyA_site      1810
                     /gene="Tdpoz8"
                     /gene_synonym="EG229571; Gm4858"
                     /note="putative"
ORIGIN      
        1 gtctttgcct gcttgctctc ttcttactag caagcccaat tctttcctgg tactggagtc
       61 tatttcttca gaattccagc atatactgaa gaacacctga gacttcaaaa agtgtggact
      121 gagttccagt tttaaatcca aagtacctca agcagaaatg tcaggggaac tggaagccaa
      181 gagcagggac gacacacaga gccatgaaca gaaattgtgc tacagcccaa gtgctaacac
      241 cagatgacaa atttaccgtc ctctgcaagg tgagcgtact ccaagactcc ttcagcattt
      301 ctggacagaa cccaagacct gcaatcaagg ttacaaggtg cgcattggaa gatgacgtag
      361 gggagctgtg ggagaattcc ctcttcacag actgctgcct gttggtagct ggccatgaat
      421 tcagggctca caaggtcatc ctggcagctc gctctccagt tttcagagcc atgtttgaac
      481 atgaaatgaa ggtgagacta acaaaccgtg ttgagatcca tgacctggat ccccaagtct
      541 tcaaagagat gatgggcttc atctacactg ggaaggcatc acacctccac agctactcta
      601 tggccagtga tgtgctggca gctgctgaca ggtgtggact gaagggcttg aaggtcatgt
      661 gtgaggatgc cctctgcagg aacctctctg tggagaatgc tgcacacact ctcatcctgg
      721 ctgatctcca cagcatagag catctgaaga ttcaggccct ggatttcatt acagtttatg
      781 cttccgaggt ctctaagact tcagggtgga tgtcaatgag ggagtcacat ccccacttgg
      841 tggctcaagc attccactct ctggcttcta cacatcgtat tttcggggcc ctccctttca
      901 aacaacttaa gtggtcttta agacctactc agctatgacc tacacctgtc ttccaacagc
      961 aactgggaaa tattcttccc agtgactcct ccttagacaa tggtattgct ggaacattta
     1021 cactgaattt gggggagggc agcatggtgg cccaggattt gcaatagttc taaatatgtt
     1081 ggaatggtgg ttgggaaaat ggacagcatt ggaatctgga acagtctacc tgacatctat
     1141 tctgttgatc ttctcattta atttttgtct gatgtcttgg aatctgggat tgaacttagg
     1201 tattggcctg aagcacagac caaaagggtt tcttcagaga aatgtgtctg cattgggcta
     1261 acagaaaaga tgaccagggg ctcagagcaa aggagaaatc aaacatgaat gtttattctt
     1321 aagagaagta aaggggaaag aaagctttgt ttttttttta aactcagttt ggggtggggg
     1381 ttggaggtgg ggacatcctt gtgcagttgg gggcagggag gaagtgtggg aagtggtatg
     1441 gggatggatt gagagaggaa taaaatctgg agcttaaagt aaaataaaat aaaataaaat
     1501 aactcagttt ggttgtttga ataagcatgg cccatgaaaa ttgacactac taggaactgt
     1561 ggccatgttg gaggaagtgt gctcttgtta taggaagttt gtcctcactg tggaggcatg
     1621 gctttgaggt aatatatgtg gtcaagctct agccagtgtc agtttcttcc tgactgcctt
     1681 tatatcaagg tgctcagttc ctcctccaac atcatgtcag cttggacact gtcatgtttc
     1741 ttgtgatgat gataatagac tgtacctctg aaatctaagc cagccccaat taaatgtcct
     1801 ttttaaaagt
//
