LOCUS       NM_013688               3074 bp    mRNA    linear   ROD 01-AUG-2024
DEFINITION  Mus musculus t-complex-associated testis expressed 1 (Tcte1), mRNA.
ACCESSION   NM_013688
VERSION     NM_013688.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3074)
  AUTHORS   Olszewska,M., Malcher,A., Stokowy,T., Pollock,N., Berman,A.J.,
            Budkiewicz,S., Kamieniczna,M., Jackowiak,H., Suszynska-Zajczyk,J.,
            Jedrzejczak,P., Yatsenko,A.N. and Kurpisz,M.
  TITLE     Effects of Tcte1 knockout on energy chain transportation and
            spermatogenesis: implications for male infertility
  JOURNAL   Hum Reprod Open 2024 (2), hoae020 (2024)
   PUBMED   38650655
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3074)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   3  (bases 1 to 3074)
  AUTHORS   Miyata,H., Morohoshi,A. and Ikawa,M.
  TITLE     Analysis of the sperm flagellar axoneme using gene-modified mice
  JOURNAL   Exp Anim 69 (4), 374-381 (2020)
   PUBMED   32554934
  REMARK    Review article
REFERENCE   4  (bases 1 to 3074)
  AUTHORS   Morohoshi,A., Miyata,H., Shimada,K., Nozawa,K., Matsumura,T.,
            Yanase,R., Shiba,K., Inaba,K. and Ikawa,M.
  TITLE     Nexin-Dynein regulatory complex component DRC7 but not FBXL13 is
            required for sperm flagellum formation and male fertility in mice
  JOURNAL   PLoS Genet 16 (1), e1008585 (2020)
   PUBMED   31961863
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 3074)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 3074)
  AUTHORS   Mancoll,R.E., Snyder,L.C. and Silver,L.M.
  TITLE     Delineation of the t complex on mouse chromosome 17 by in situ
            hybridization
  JOURNAL   Mamm Genome 2 (3), 201-205 (1992)
   PUBMED   1543913
REFERENCE   7  (bases 1 to 3074)
  AUTHORS   Nadeau,J.H., Herrmann,B., Bucan,M., Burkart,D., Crosby,J.L.,
            Erhart,M.A., Kosowsky,M., Kraus,J.P., Michiels,F., Schnattinger,A.
            et al.
  TITLE     Genetic maps of mouse chromosome 17 including 12 new anonymous DNA
            loci and 25 anchor loci
  JOURNAL   Genomics 9 (1), 78-89 (1991)
   PUBMED   1672293
REFERENCE   8  (bases 1 to 3074)
  AUTHORS   Bibbins,K.B., Tsai,J.Y., Schimenti,J., Sarvetnick,N., Zoghbi,H.Y.,
            Goodfellow,P. and Silver,L.M.
  TITLE     Human homologs of two testes-expressed loci on mouse chromosome 17
            map to opposite arms of chromosome 6
  JOURNAL   Genomics 5 (1), 139-143 (1989)
   PUBMED   2767684
REFERENCE   9  (bases 1 to 3074)
  AUTHORS   Sarvetnick,N., Tsai,J.Y., Fox,H., Pilder,S.H. and Silver,L.M.
  TITLE     A mouse chromosome 17 gene encodes a testes-specific transcript
            with unusual properties
  JOURNAL   Immunogenetics 30 (1), 34-41 (1989)
   PUBMED   2568335
  REMARK    Erratum:[Immunogenetics 1990;31(4):283-4]
REFERENCE   10 (bases 1 to 3074)
  AUTHORS   Rappold,G.A., Stubbs,L., Labeit,S., Crkvenjakov,R.B. and Lehrach,H.
  TITLE     Identification of a testis-specific gene from the mouse t-complex
            next to a CpG-rich island
  JOURNAL   EMBO J 6 (7), 1975-1980 (1987)
   PUBMED   3653077
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ047574.1, M28821.1, CX237405.1 and AC163677.2.
            
            [WARNING] On Aug 1, 2024 this sequence was replaced by NM_013688.3.
            
            On Feb 3, 2007 this sequence version replaced NM_013688.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            CDS exon combination :: M28821.1, BC145741.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMN00849374, SAMN00849381 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-440               CJ047574.1         2-441
            441-806             M28821.1           248-613
            807-807             CX237405.1         699-699
            808-1729            M28821.1           615-1536
            1730-3074           AC163677.2         61820-63164         c
FEATURES             Location/Qualifiers
     source          1..3074
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 22.54 cM"
     gene            1..3074
                     /gene="Tcte1"
                     /gene_synonym="D17Sil1; Tcte-1"
                     /note="t-complex-associated testis expressed 1"
                     /db_xref="GeneID:21645"
                     /db_xref="MGI:MGI:98640"
     exon            1..138
                     /gene="Tcte1"
                     /gene_synonym="D17Sil1; Tcte-1"
                     /inference="alignment:Splign:2.1.0"
     exon            139..508
                     /gene="Tcte1"
                     /gene_synonym="D17Sil1; Tcte-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             238..1734
                     /gene="Tcte1"
                     /gene_synonym="D17Sil1; Tcte-1"
                     /note="T-complex-associated testis-expressed protein 1"
                     /codon_start=1
                     /product="dynein regulatory complex subunit 5"
                     /protein_id="NP_038716.2"
                     /db_xref="CCDS:CCDS37629.1"
                     /db_xref="GeneID:21645"
                     /db_xref="MGI:MGI:98640"
                     /translation="MQETPSVPSNSSSHSQSVLTIQRQVSALGSSSTGPTSLKTSSTP
                     TPGQLKTKVPNVRRMRRIISEDAEWSLAIVPLLTELCIQHIVKNFQNNPILKQLPLEH
                     QKKVLSNLPPELPLTVTANLIDDENYWHRCCIKRWSVCHVSRHGGSWKRMFFERHLEN
                     LLKLFIPGTTDPNVILDLLPLCRNYVRRIHVDQFLPPVRMPTPLQGEEQSDSGSEGEG
                     SEPEKDHYQLQTLVGGLKHLEELDLVYGVKDCGMNFEWNLFLFTYRDCYSLAATIKAC
                     HTLKIFKLTRSKVDDDKARILIRSLLDHPALEELDLSHNLIGDRGARAAAKLLSHSRL
                     RVLNLANNQLQAPGAQSLAHALAHNTNLVFLNLRLNCIEDEGGQAIAHALETNKCLSV
                     LHLGGNKLSEPTATLLSQMLTVNTTLVSLNLSCNHIGQDGGKQLLEGISDNKTILEFD
                     LRLSDVSQESEYLIGQVLHANREAARQRTLNPGHFSSPTNNCTENSVV"
     exon            509..1077
                     /gene="Tcte1"
                     /gene_synonym="D17Sil1; Tcte-1"
                     /inference="alignment:Splign:2.1.0"
     exon            1078..1527
                     /gene="Tcte1"
                     /gene_synonym="D17Sil1; Tcte-1"
                     /inference="alignment:Splign:2.1.0"
     exon            1528..3074
                     /gene="Tcte1"
                     /gene_synonym="D17Sil1; Tcte-1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggggcaacc gaggaggagg gcgccaacgc ccagggcgga gggctcaggg tccgccccct
       61 ggcgactcag gcgtccctaa caaccaactg cgccaagcca accgcctcag agagcagtct
      121 cctgggtccc cagagcagct acgaccccgc ccccatcctg tatcctgcct gctgtaagaa
      181 gcttcctact gcaaggctgc caggattccg acccctgcct ccccgctggc cggcaacatg
      241 caggaaaccc catcagtacc gtccaactct tcgtctcaca gccagtcggt tctcaccatc
      301 cagcgccagg tctctgcctt gggcagctcc agcacaggac ccacgtcctt gaagaccagc
      361 agcaccccta ccccaggcca gctgaagacc aaggtcccaa atgtccgtcg catgcgcagg
      421 atcatctccg aggatgcaga gtggtcactg gccatcgtac ctctccttac agaactctgc
      481 attcaacata tcgtcaagaa cttccagaac aaccctatcc tgaagcagct gccgctagag
      541 caccaaaaga aggtcttgag caacctgccc cccgagctgc ctttgacggt gaccgctaac
      601 ttgattgacg atgagaatta ctggcaccgc tgctgcatca agcgctggtc cgtgtgccac
      661 gtgtccaggc acggcggcag ctggaagcgt atgttcttcg agagacacct ggagaacctg
      721 ctgaagctat tcatcccggg gaccacggac cccaacgtga tcctggacct gctgcccctc
      781 tgcaggaact acgtgcgccg cattcatgtg gaccagttcc tcccacctgt gcggatgccg
      841 accccgctcc agggagagga acagtcggac tctggcagtg agggcgaggg gagcgagcca
      901 gagaaggacc actaccagct gcagacgctg gtgggtggcc tcaaacacct ggaggagctg
      961 gacctggtgt acggcgtcaa agactgtggc atgaattttg agtggaacct ctttctcttc
     1021 acctaccgag actgctactc tctggcagcc accatcaaag cttgccacac cctcaagatc
     1081 ttcaagctga cccgaagtaa ggtggacgac gataaggcgc gcatcctaat ccgtagcctg
     1141 ctggaccacc cagccctgga ggagctggac ttatcccaca acctcatcgg agaccgtggt
     1201 gcacgagcag cggctaagct gctgagccac agtcgcctga gagtgctcaa cctggccaac
     1261 aatcaactgc aggcgcctgg cgcacagtca ctggctcacg cactggcaca caacaccaac
     1321 ctggtcttcc tcaacctccg cctcaactgt atcgaggacg agggtggcca agcaatcgcc
     1381 cacgccctgg agaccaacaa gtgcctctcc gtgctgcacc ttggtggcaa caagctgtct
     1441 gagcccacag ccacactcct ctcccagatg ctcactgtca acactacgct cgtcagcctc
     1501 aacctatcct gcaaccacat tgggcaggat ggtgggaagc aactcctgga aggcatatca
     1561 gacaacaaga ccattctaga gttcgacctg cgactgtcag atgtatccca ggagagcgag
     1621 tacctcattg gccaggttct gcatgccaac cgagaggctg cccgccagcg gaccctgaat
     1681 cctggccact tctcctcacc cactaacaac tgtactgaga attctgtagt ctaagatgtg
     1741 gaacagggat agacggtgat ctgatgggtt accccggcaa ccacaccttc atttcacacc
     1801 cttgatatgt ctgcccctgg ttctgaggta tcgagaagaa gggatcacga atctccttgg
     1861 aatgagcagc cagatttgta tatatgaaga tgccaaggta cagaaggggc acctaaggat
     1921 gaaatgtgtg cactagctcc cacacctaga aaatggccat tactagaccc ataacaggaa
     1981 cagggaaggc aaaggactct aaaagaccat ccctgctcaa actcttcatg agcaccatct
     2041 acctcttgac tcaccccacc cctttccctt tttactaagc agatagctga gccctgacct
     2101 cagtctacac acacacacac acacatacac acacatgcat gagcacacat gcatacacac
     2161 acacatatgc gtgtacacac acagagcaga actatgcctg tctccctcac cctcccaccc
     2221 tccctggaga tgctacttgc ctgacgttgt ctgcttgtac agatcgcgcc ctcactaacc
     2281 ctcaaaccgg gaatgggggg ggcggggggc agaaggatgg ggaacaagtg tcactgaggg
     2341 agcagaccag tgagtcatcc acacttttat tatccatcag tgtgatttgt acaatctttg
     2401 cgcttggaat tccatgacag aaaggccaca gtgtgatgca cccaatttga cagaggcctg
     2461 tcttctcccg agccaggcct agcccacccc acaagccctt atcctcagga catacagtct
     2521 tccaggtacc ctctccttga gtccctggca cgctgtgact gcccaccatg gggccacacc
     2581 cataggaatc acagactatg gattcatgag aggatcttgg ctgactaatt caaactctta
     2641 tctcccaact ctcctcgggc tgagtgaccc agtgcccgtc tacctcaaag atgggcgact
     2701 gcagctgcaa tccaagaggg cctgcactcc agggactctt tgcaagaagc aggcgctgag
     2761 tagagcacca gagggggctt gggagtgact gtgtgtgtgc ctgtcggggg cagcctagag
     2821 tcctctgtgc ctgacaccct ctgacagttc cagagtgcaa acatgtaggt gtgagggtgt
     2881 gtgtgtgtgt gtgtgtatct gtatctctct ctgtgtttgt gtgtgtgtgt gtgtgtgtgt
     2941 gtgtgtgtag ccacagctgc tagcagaggt tctaattaga gaaacaagaa cattcagtgt
     3001 aaagtttaat tttagagatt aattaatttt ctggttttca ttttccctgg caatcaataa
     3061 agctaccaag aaaa
//
