LOCUS       NM_001167578            2528 bp    mRNA    linear   ROD 16-OCT-2021
DEFINITION  Mus musculus t-complex protein 10c (Tcp10c), mRNA.
ACCESSION   NM_001167578 XM_001477276 XM_001477299 XM_001477320 XM_001477339
            XM_001477351
VERSION     NM_001167578.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Schimenti JC.
  TITLE     ORFless, intronless, and mutant transcription units in the mouse t
            complex responder (Tcr) locus
  JOURNAL   Mamm Genome 10 (10), 969-976 (1999)
   PUBMED   10501965
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Ardlie KG and Silver LM.
  TITLE     Recent evolution of mouse t haplotypes at polymorphic
            microsatellites associated with the t complex responder (Tcr) locus
  JOURNAL   Genet Res 67 (1), 1-10 (1996)
   PUBMED   8919885
REFERENCE   3  (bases 1 to 2528)
  AUTHORS   Davies PO and Willison KR.
  TITLE     Sequence of the t complex Tcp-10at gene and examination of the
            Tcp-10t gene family
  JOURNAL   Mamm Genome 1 (4), 235-241 (1991)
   PUBMED   1794052
REFERENCE   4  (bases 1 to 2528)
  AUTHORS   Bullard DC and Schimenti JC.
  TITLE     Molecular structure of Tcp-10 genes from the t complex responder
            locus
  JOURNAL   Mamm Genome 1 (4), 228-234 (1991)
   PUBMED   1794051
REFERENCE   5  (bases 1 to 2528)
  AUTHORS   King TR, Dove WF, Guenet JL, Herrmann BG and Shedlovsky A.
  TITLE     Meiotic mapping of murine chromosome 17: the string of loci around
            l(17)-2Pas
  JOURNAL   Mamm Genome 1 (1), 37-46 (1991)
   PUBMED   1794044
REFERENCE   6  (bases 1 to 2528)
  AUTHORS   Bullard DC and Schimenti JC.
  TITLE     Molecular cloning and genetic mapping of the t complex responder
            candidate gene family
  JOURNAL   Genetics 124 (4), 957-966 (1990)
   PUBMED   2323558
REFERENCE   7  (bases 1 to 2528)
  AUTHORS   Hammer MF, Schimenti J and Silver LM.
  TITLE     Evolution of mouse chromosome 17 and the origin of inversions
            associated with t haplotypes
  JOURNAL   Proc Natl Acad Sci U S A 86 (9), 3261-3265 (1989)
   PUBMED   2717616
REFERENCE   8  (bases 1 to 2528)
  AUTHORS   Schimenti J, Cebra-Thomas JA, Decker CL, Islam SD, Pilder SH and
            Silver LM.
  TITLE     A candidate gene family for the mouse t complex responder (Tcr)
            locus responsible for haploid effects on sperm function
  JOURNAL   Cell 55 (1), 71-78 (1988)
   PUBMED   3167978
REFERENCE   9  (bases 1 to 2528)
  AUTHORS   Schimenti J, Vold L, Socolow D and Silver LM.
  TITLE     An unstable family of large DNA elements in the center of the mouse
            t complex
  JOURNAL   J Mol Biol 194 (4), 583-594 (1987)
   PUBMED   2821263
REFERENCE   10 (bases 1 to 2528)
  AUTHORS   Rohme,D., Fox,H., Herrmann,B., Frischauf,A.M., Edstrom,J.E.,
            Mains,P., Silver,L.M. and Lehrach,H.
  TITLE     Molecular clones of the mouse t complex derived from microdissected
            metaphase chromosomes
  JOURNAL   Cell 36 (3), 783-788 (1984)
   PUBMED   6697397
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ046593.1, AK076614.1 and AC166110.3.
            
            On or before Nov 10, 2009 this sequence version replaced
            XM_001477276.1, XM_001477299.1, XM_001477320.1, XM_001477339.1,
            XM_001477351.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK076614.1, BC061173.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-56                CJ046593.1         2-57
            57-111              AK076614.1         2-56
            112-130             AC166110.3         48737-48755
            131-2528            AK076614.1         77-2474
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 8.86 cM"
     gene            1..2528
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /note="t-complex protein 10c"
                     /db_xref="GeneID:100041352"
                     /db_xref="MGI:MGI:98543"
     exon            1..104
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            105..231
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            232..412
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     CDS             233..1681
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /codon_start=1
                     /product="t-complex protein 10c"
                     /protein_id="NP_001161050.1"
                     /db_xref="CCDS:CCDS49953.1"
                     /db_xref="GeneID:100041352"
                     /db_xref="MGI:MGI:98543"
                     /translation="MHEPSLLQPESLLVTWRLNSQQRQAMLEDLSQGKGSNHKKRKME
                     STAQITEEDSKLDEVVGLQKQICDLGTELTRQSSWWCVAHKDLQSQIDALIKENQEIR
                     AELKTLKKQDAEATKACIGSPTSARASNTLPVYIKIEGIDSERTTSWDERDELSGSPP
                     NRSTMATGGTDSQDERLSFTSVDEKPVYIKIEGIDSERTTSWDERDELSGSPPNRSTM
                     ATGGTDSQDERLSFTSVDEKVIHMSSKFLQRSFGRMSPEPLSDSTFLDTESLADIWSS
                     NSETSDGELLLHAQASRVIPCFSPNALWVQVERMLSDGRTIITFPNGTRKEISADKKT
                     TLIRFFNGDMKIKSDQKAIYYYADAQTMHTTYPDGVEVVQFPNKWTEKFYPDGSKETV
                     FPDGTVKQLKDGCEETVFPDGTFVTVKRNGDKTIMFSNGEKEIHTARFKRKEFPDGTT
                     KTVYCNGCQETKYASGRVRVKDEKGTVILDWK"
     exon            413..628
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            629..787
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            788..946
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            947..1046
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            1047..1150
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            1151..1288
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            1289..1373
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            1374..1491
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
     exon            1492..2528
                     /gene="Tcp10c"
                     /gene_synonym="D17Leh66C; D17Leh66ca; Gm9880; T66C-a;
                     Tcp-10c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggtttcctg gcgttcttaa gctagctgtg tagagggcac agagagctgt tgggatatgg
       61 cctagatgag gaatgtcctg gtagaagtca ccatcttagg ctaggttatg gagttgtagg
      121 ttggggacga ggggtttgtc ctgatgagag gcagcgaaac cttccacagc aaaggtctga
      181 cgaaggacta agacctccca ggcgccctct caaggccctg ttcacctcaa gaatgcacga
      241 gccttccctt ttacaaccag aaagcttact ggtcacctgg aggctaaata gtcagcagag
      301 acaagccatg ttggaggatc tgagtcaagg aaaagggtcc aaccataaga agaggaagat
      361 ggagagcaca gcccagatca ctgaggaaga cagcaagctt gatgaggttg tggggctgca
      421 gaagcagatc tgtgaccttg ggacagagct cacaagacaa tcatcttggt ggtgcgtagc
      481 tcacaaagac ctccaaagcc agatcgatgc tctgataaag gagaaccagg agatccgtgc
      541 ggagctgaag accttgaaga agcaggatgc ggaggccacc aaagcctgta taggctcgcc
      601 cacctcggca agagcaagca acactctgcc agtgtacata aagatagagg gaattgattc
      661 cgagaggaca acctcatggg atgaaagaga tgagctttct ggaagtcctc caaacagaag
      721 cacaatggcc accggaggaa cagactccca ggatgaaagg ctgtctttta catctgtgga
      781 tgaaaagcca gtgtacataa agatagaggg aattgattcc gagaggacaa cctcatggga
      841 tgaaagagat gagctttctg gaagtcctcc aaacagaagc acaatggcca ccggaggaac
      901 agactcccag gatgaaaggc tgtcttttac atctgtggat gaaaaggtta tacacatgtc
      961 ttccaaattt ctgcaaagaa gcttcggcag aatgtcacca gaaccactgt ctgacagcac
     1021 attcctggac acagagtcac tggctgacat ctggtcctca aattcagaga cttcggacgg
     1081 tgaacttctc ctgcatgctc aagcaagcag ggtcatccct tgtttttccc caaatgcact
     1141 gtgggtgcag gtggagcgga tgctcagcga cgggcgaacc atcatcacct tcccaaatgg
     1201 aaccaggaag gagatcagtg ctgacaagaa gaccaccctc atcaggtttt ttaacggtga
     1261 catgaagatc aagtccgatc agaaagcgat ttattattat gcggacgcac aaacaatgca
     1321 cacaacctac ccagatggtg ttgaagttgt gcagtttcct aacaagtgga ctgaaaaatt
     1381 ctacccggat ggctccaagg aaaccgtgtt tcctgatggg acagtgaaac agcttaagga
     1441 tggatgtgaa gagacggtgt tccccgatgg gacatttgtg acagtgaaga ggaacggaga
     1501 caaaaccatc atgttcagca acggagagaa agaaatccac acggccaggt tcaagcggaa
     1561 ggaattccca gatggcacca ccaagactgt gtattgcaat ggctgccagg agaccaagta
     1621 tgcctcaggg agggtcaggg tcaaagatga gaagggaact gtcatcctgg actggaagta
     1681 gtgcatccaa cagactcaag gccaggcagt aggctccaat ctccaaatat agttttgacc
     1741 aaaacagaca aagcgactca cgattccctt gacaatcctg gagatcccct gcacatgagg
     1801 agtaaagaga catccaaaaa ttgtaaagaa agagaccatg tagccaccac catcttggga
     1861 gagaggtcag agaagcagta gccagaaatg aggtcctgga catggcttcc atggccttgt
     1921 ccagaccatg ccttctgtcg gagtttggcc ctagagcaga gggtacaatg ggagcaacgt
     1981 gaccactgcc agctagttcc tgggagcagc cgttaacaac agctggctcc gtgtttttgc
     2041 ttggccaaca cctgcctgca tctacttcta tcccctttta gagtcctcat caatgggatc
     2101 cagggggatg tatcttcact ggtgcctgat gtatgaatag acttgattta accatcctga
     2161 agtgtctaga cagaacctca tgtggcattc tatcccataa attcacacaa ttttgatctg
     2221 tcaatcaaca aggagatgag taaaagcaca gatgaaaaca aagacagaaa catagtgggc
     2281 cacacctcct acctgttcct gtgagtctgc cctgctgccc cctcatttcc tgggagcgct
     2341 ctgccatgct gtaggagaga ttcctcccta gctactaggc agccaccaat ctcaatcttc
     2401 cagtccctac accgatgagg agttctgaga atgtgggtgt ttgtttgttt gtttgttttg
     2461 tgtttttgtt ttgcttttgt tttctgtgtc ctccatattg ctaaagtgag tagattcggg
     2521 aagaactc
//
