LOCUS       NM_011553               2314 bp    mRNA    linear   ROD 16-OCT-2021
DEFINITION  Mus musculus t-complex protein 10a (Tcp10a), transcript variant 1,
            mRNA.
ACCESSION   NM_011553 NM_009340 XM_918481
VERSION     NM_011553.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Herrmann BG, Koschorz B, Wertz K, McLaughlin KJ and Kispert A.
  TITLE     A protein kinase encoded by the t complex responder gene causes
            non-mendelian inheritance
  JOURNAL   Nature 402 (6758), 141-146 (1999)
   PUBMED   10647005
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Schimenti JC.
  TITLE     ORFless, intronless, and mutant transcription units in the mouse t
            complex responder (Tcr) locus
  JOURNAL   Mamm Genome 10 (10), 969-976 (1999)
   PUBMED   10501965
REFERENCE   3  (bases 1 to 2314)
  AUTHORS   Gao JL, Chen H, Filie JD, Kozak CA and Murphy PM.
  TITLE     Differential expansion of the N-formylpeptide receptor gene cluster
            in human and mouse
  JOURNAL   Genomics 51 (2), 270-276 (1998)
   PUBMED   9722950
REFERENCE   4  (bases 1 to 2314)
  AUTHORS   Ewulonu UK, Schimenti K, Kuemerle B, Magnuson T and Schimenti J.
  TITLE     Targeted mutagenesis of a candidate t complex responder gene in
            mouse t haplotypes does not eliminate transmission ratio distortion
  JOURNAL   Genetics 144 (2), 785-792 (1996)
   PUBMED   8889539
REFERENCE   5  (bases 1 to 2314)
  AUTHORS   Ardlie KG and Silver LM.
  TITLE     Recent evolution of mouse t haplotypes at polymorphic
            microsatellites associated with the t complex responder (Tcr) locus
  JOURNAL   Genet Res 67 (1), 1-10 (1996)
   PUBMED   8919885
REFERENCE   6  (bases 1 to 2314)
  AUTHORS   Forejt J and Gregorova S.
  TITLE     Genetic analysis of genomic imprinting: an Imprintor-1 gene
            controls inactivation of the paternal copy of the mouse Tme locus
  JOURNAL   Cell 70 (3), 443-450 (1992)
   PUBMED   1322799
REFERENCE   7  (bases 1 to 2314)
  AUTHORS   Ebersole T, Lai F and Artzt K.
  TITLE     New molecular markers for the distal end of the t-complex and their
            relationships to mutations affecting mouse development
  JOURNAL   Genetics 131 (1), 175-182 (1992)
   PUBMED   1350556
REFERENCE   8  (bases 1 to 2314)
  AUTHORS   Laherty CD, O'Rourke K, Wolf FW, Katz R, Seldin MF and Dixit VM.
  TITLE     Characterization of mouse thrombospondin 2 sequence and expression
            during cell growth and development
  JOURNAL   J Biol Chem 267 (5), 3274-3281 (1992)
   PUBMED   1371115
REFERENCE   9  (bases 1 to 2314)
  AUTHORS   Pilder SH, Decker CL, Islam S, Buck C, Cebra-Thomas JA and Silver
            LM.
  TITLE     Concerted evolution of the mouse Tcp-10 gene family: implications
            for the functional basis of t haplotype transmission ratio
            distortion
  JOURNAL   Genomics 12 (1), 35-41 (1992)
   PUBMED   1339385
REFERENCE   10 (bases 1 to 2314)
  AUTHORS   Johnson KR, Cook SA, Bustin M and Davisson MT.
  TITLE     Genetic mapping of the murine gene and 14 related sequences
            encoding chromosomal protein HMG-14
  JOURNAL   Mamm Genome 3 (11), 625-632 (1992)
   PUBMED   1360278
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC117241.4 and AK161455.1.
            
            On or before Feb 6, 2012 this sequence version replaced
            NM_009340.1, NM_011553.3.
            
            Transcript Variant: This variant (1) represents the shorter
            transcript.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK161455.1, SRR5189685.174215.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-29                AC117241.4         66832-66860         c
            30-2021             AK161455.1         1-1992
            2022-2022           AC117241.4         45952-45952         c
            2023-2314           AK161455.1         1994-2285
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 4.72 cM"
     gene            1..2314
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /note="t-complex protein 10a"
                     /db_xref="GeneID:21461"
                     /db_xref="MGI:MGI:98541"
     exon            1..90
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            91..217
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            218..369
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     CDS             265..1581
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /codon_start=1
                     /product="t-complex protein 10a"
                     /protein_id="NP_035683.2"
                     /db_xref="CCDS:CCDS28377.1"
                     /db_xref="GeneID:21461"
                     /db_xref="MGI:MGI:98541"
                     /translation="MLEDLSQGKGSNHEKRKMESTAQITEEDSKLDEVVGLQKQICDL
                     GTELTRQSSWWCIAHKDLQSQIDALIKENQEIRAELKTLKKQDAEATKACIGSPTPAR
                     ASNTLPVYIKIEGTDSERTTSWDERDELSGSPPNRSTMATGGTDSQDEMLSFTSVDEK
                     VIHMSSKFLQRSLGRMSPEPLSDSTFLDTESLADIWSSNPETSDGELLLHAQASRVIP
                     CFSPNALWVQNIPTKSRAPKEIQQTSDTTKTDETKEKQHPNGKVERMLSDGRTIITFP
                     NGTRKEISADKKTTLIRFFNGDMKKIKSNQKVIYYYADAQTMHTTYPDGVEVVQFPNK
                     WTEKFYPDGSKETVFPDGTVKRLKDGCEETVFPDGTFVTVKRNGDKTIMFSNGEKEIH
                     TARFKRKEFPDGTTKTVYCNGCQETKYASGRVRVKDEKGTVILDWK"
     exon            370..585
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            586..744
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            745..844
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            845..948
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            949..1047
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            1048..1188
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            1189..1273
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..1391
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
     exon            1392..2314
                     /gene="Tcp10a"
                     /gene_synonym="D17Leh66A; D17Leh66aa; Gm10326; T66A-a;
                     Tcp-10a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcttaagcta gctgtgtagc gggcacagag agctgttggg atatggccta gatgaggaat
       61 gtcctggtag aagtcaccat cttaggctag gttatggagt tgtaggttgg ggacgagggg
      121 tttgtcctga tgagaggcag cgaaaccttc cacagcaaag gtctgacgaa ggactaagac
      181 ctcccaggcg ccctctcaag gccctgttca cctcaagaat gcttactggt cacctcgagg
      241 ctaaatagtc agcagagaca agccatgttg gaggatctga gtcaaggaaa agggtccaac
      301 catgagaaga ggaagatgga gagcacagcc cagatcactg aggaagacag caagcttgat
      361 gaggttgtgg ggctgcagaa gcagatctgt gaccttggga cagagctcac aagacaatca
      421 tcttggtggt gcatagctca caaagacctc caaagccaga tcgatgctct gataaaggag
      481 aaccaggaga tccgtgcgga gctgaagacc ttgaagaagc aggatgcgga ggccaccaaa
      541 gcctgtatag gctcgcccac cccggcaaga gcaagcaaca ctctgccagt gtacataaag
      601 atagagggaa ctgattccga gaggacaacc tcatgggatg aaagagatga gctttctgga
      661 agtcctccaa acagaagcac aatggccacc ggaggaacag actcccagga tgaaatgctg
      721 tcttttacat ctgtggatga aaaggttata cacatgtctt ccaaatttct gcaaagaagc
      781 ttgggcagaa tgtcaccaga accactgtct gacagcacat tcctggacac agagtcactg
      841 gctgacatct ggtcctcaaa tccagagact tcggacggtg aacttctcct gcatgctcaa
      901 gcaagcaggg tcatcccttg tttttcccca aatgcactgt gggtgcagaa tattccaaca
      961 aagtcaagag ctcctaaaga aatacagcaa acctcggaca ctacaaagac tgatgagaca
     1021 aaggaaaagc aacacccaaa tggcaaggtg gagcggatgc tcagcgacgg gcgaaccatc
     1081 atcaccttcc ccaatggaac caggaaggag atcagtgctg acaagaagac caccctcatc
     1141 aggtttttta acggtgacat gaagaagatc aagtccaatc agaaagtgat ttattattat
     1201 gcggatgcac aaacaatgca cacaacctac ccagatggtg ttgaagtggt gcagtttcct
     1261 aacaagtgga ctgaaaaatt ctacccggat ggctccaagg aaaccgtgtt tcctgatggg
     1321 acagtgaaac ggcttaagga tggatgtgaa gagacggtgt tccctgatgg gacatttgtg
     1381 acagtgaaga ggaacggaga caaaaccatc atgttcagca acggagagaa agaaatccac
     1441 acggccaggt tcaagcggaa ggaattccca gatggcacca ccaagactgt gtattgcaat
     1501 ggctgccagg agactaagta tgcctcaggg agggtcaggg tcaaagatga gaagggaact
     1561 gtcatcctgg actggaagta gtgcatccaa cagactcaag gccaggcagt aggctccaat
     1621 ctccaaatat agttttgacc aaaacagaca aagcgactca cgattccctt gacaatcctg
     1681 gagatcccct gcacatgagg agtaaagaga catccaaaaa ttgtaaagaa agagaccatg
     1741 tagccaccac catcttggga gagaggtcag agaagcagta gccagaaatg aggtcctgga
     1801 catggcttct gtggccttgt ccagaccatg ccttctgtcg gagtctggcc ctagagcaga
     1861 gggtacaatg ggagcaacgt gaccactgcc agctagttcc tgggagcagc cgttaacaac
     1921 agctggctcc gtgtttttgc ttggccaaca cctgcctgca tctacttcta tcccctttta
     1981 gagtcctcat caatgggatc cagggggatg tatcttcact ggtgcctgat gtatgaatag
     2041 acttgattta accatcctga agtgtctaga cagaacctca tgtggcattc tatcccataa
     2101 attcacacaa ttttgatctg tcaatcaaca aggagatgag taaaagcaca gatgaaaaca
     2161 aagacagaaa catagtgggc cacacctcct acctgttcct gtgagtctgc cctgctgccc
     2221 cctcatttcc tgggagcact ctgccatgct gtaggagaga ttcctcccta gctactaggc
     2281 agccaccaat ctcaatcttc cagtccttac actg
//
