LOCUS       XM_006514612            2013 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus transcobalamin 2 (Tcn2), transcript variant
            X3, mRNA.
ACCESSION   XM_006514612
VERSION     XM_006514612.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000077.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Aug 8, 2019 this sequence version replaced XM_006514612.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="11"
     gene            1..2013
                     /gene="Tcn2"
                     /gene_synonym="Tcn-2"
                     /note="transcobalamin 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 14
                     mRNAs, 100 ESTs, 1110 long SRA reads, 10 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 44 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:21452"
                     /db_xref="MGI:MGI:98534"
     CDS             259..1551
                     /gene="Tcn2"
                     /gene_synonym="Tcn-2"
                     /codon_start=1
                     /product="transcobalamin-2 isoform X1"
                     /protein_id="XP_006514675.1"
                     /db_xref="GeneID:21452"
                     /db_xref="MGI:MGI:98534"
                     /translation="MELLKALLLLSGVFGALAEFCVIPRIDSQLVEKLGQRLLPWMDR
                     LSSEQLNPSVFVGLRLSSMQAGTKEDLYLHSLKIHYQQCLLRSTSSDDNSSCQPKLSG
                     GSLALYLLALRANCEFFGSRKGDRLISQLKWFLEDEKKAIGHNHEGHPNTNYYQYGLS
                     ILALCVHQKRLHDSVVGKLLYAVEHDYFTYQGHVSVDTEAMAGLALTCLERFNFNSDL
                     RPRITMAIETVREKILKSQAPEGYFGNIYSTPLALQMLMTSPASGVGLGTACIKAGTS
                     LLLSLQDGAFQNPLMISQLLPILNHKTYLDLIFPDCQASRVMLVPAVEDPVHISEVIS
                     VTLKVASALSPYEQTFFVFAGSSLEDVLKLAQDGGGFTYGTQASLSGPYLTSVLGKDA
                     GDREYWQLLRAPDTPLLQGIADYKPQDGETIELRLVRW"
ORIGIN      
        1 gcggggcggg tgtgcaagcc ggggcagggc ggaccccggc gagcactgtc agatagactt
       61 gggacagatt aggcaccagg ctttctgtgc tgcttccggg gtctttaaag cgttcgggac
      121 agataagcag cgtgcttccg gctgttggaa ggacaattaa tcagtgaagc tgcctcttcc
      181 taagcaagac aacagttgca gtcagacaag ccctcaaggt gagacccagg agtctcccac
      241 ctcccacctg tgcctgccat ggagctcctg aaggcgctgc tgctcctttc tggagtcttt
      301 ggggctcttg ctgaattctg tgtaatacca cggatagaca gccagctggt agagaagttg
      361 ggtcaacgtc ttttaccttg gatggatcgg ctttcctcag agcagttgaa ccccagcgtc
      421 ttcgttggcc tgcgactttc cagcatgcag gctgggacca aagaggacct ctaccttcac
      481 agcctcaaga tccattacca gcagtgcctc ctgcggtcca cctccagcga tgataacagt
      541 agttgccagc ccaaactttc cgggggcagc ctggcgctct acctgcttgc tctcagggcc
      601 aactgcgaat tcttcgggag ccgaaagggt gacaggttga tctcacagct caagtggttc
      661 ttggaggatg agaagaaggc cattgggcac aatcatgaag gccaccccaa caccaactat
      721 taccagtatg gcctcagcat cctggcactg tgtgtccacc agaagcggct ccatgacagc
      781 gtggtgggca agctcctgta tgctgttgaa catgactact ttacctacca gggccacgtc
      841 tctgtggaca cagaagccat ggccggcttg gccctcacct gtttggagcg attcaatttc
      901 aactctgatc tgagaccacg aatcaccatg gctatcgaga cagtgcgaga gaaaatcctg
      961 aagtcccagg cccctgaggg ctactttggg aatatctata gcaccccact ggcactacag
     1021 atgctcatga catctcctgc atccggggta gggctgggca cagcgtgcat caaggcaggg
     1081 acatccctgc tgctcagcct acaggatggg gccttccaaa atcctctgat gatttcccag
     1141 ctgctaccca tcctgaacca caagacctac ttggatctta tcttcccaga ctgccaggca
     1201 tccagggtca tgttggtgcc agctgttgag gaccctgtcc acatctcaga agtcatcagc
     1261 gtcacgctga aggtcgccag tgccctgtca ccatacgaac agacattttt tgtctttgct
     1321 ggatcttcct tggaagatgt cctgaagttg gcacaagatg gcggaggatt cacgtatggg
     1381 acccaggcct ccttgtcagg cccctacctg acatctgtac tagggaaaga tgctggggac
     1441 cgagaatatt ggcagctcct ccgagcccct gacacacccc tgctgcaagg cattgctgac
     1501 tacaaacccc aggacgggga aaccattgag ctgcggctag ttagatggta gtcctacgat
     1561 ccctcctgat gtcttcacac cctgctgcca cctcaagtgc acttggaaca atgcccccca
     1621 gatcacctca gctaccttcc caaagaggat ctaagccact ccccacctgg gagcaggaag
     1681 ggaaaaaaaa cctcccctag ggaggctgct agtttgagtt tggccctgcc tgatcccaca
     1741 ggtctttcat gaagactgcc ccatagcctg aggaacaggc tgctcttgac ttcctctaca
     1801 taaagaagtc tgctggctat gggtgttgtg agtaccactg ctctgggacc agggtcccac
     1861 aagaaggacc tccatggcct gctgtggctc tgacctgcac acccaacccc tgctctctgt
     1921 tatgagagtg gtggtcccag tggtcataag gcagcctttg gtcatcggca gggccatcca
     1981 atacaattaa agccttgatt tacctgacat gga
//
