LOCUS       NM_027762               2066 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus trichohyalin-like 1 (Tchhl1), mRNA.
ACCESSION   NM_027762
VERSION     NM_027762.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2066)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2066)
  AUTHORS   Wurm,S., Zhang,J., Guinea-Viniegra,J., Garcia,F., Munoz,J.,
            Bakiri,L., Ezhkova,E. and Wagner,E.F.
  TITLE     Terminal epidermal differentiation is regulated by the interaction
            of Fra-2/AP-1 with Ezh2 and ERK1/2
  JOURNAL   Genes Dev 29 (2), 144-156 (2015)
   PUBMED   25547114
REFERENCE   3  (bases 1 to 2066)
  AUTHORS   Bailey,P.J., Klos,J.M., Andersson,E., Karlen,M., Kallstrom,M.,
            Ponjavic,J., Muhr,J., Lenhard,B., Sandelin,A. and Ericson,J.
  TITLE     A global genomic transcriptional code associated with CNS-expressed
            genes
  JOURNAL   Exp Cell Res 312 (16), 3108-3119 (2006)
   PUBMED   16919269
REFERENCE   4  (bases 1 to 2066)
  AUTHORS   Ravasi,T., Hsu,K., Goyette,J., Schroder,K., Yang,Z., Rahimi,F.,
            Miranda,L.P., Alewood,P.F., Hume,D.A. and Geczy,C.
  TITLE     Probing the S100 protein family through genomic and functional
            analysis
  JOURNAL   Genomics 84 (1), 10-22 (2004)
   PUBMED   15203200
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK017244.1, AA856087.1 and AA500450.1.
            
            On Jul 25, 2007 this sequence version replaced NM_027762.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK017244.1, BY717055.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-146               AK017244.1         2-147
            147-147             AA856087.1         17-17
            148-1036            AK017244.1         149-1037
            1037-1037           AA500450.1         267-267
            1038-2066           AK017244.1         1039-2067
FEATURES             Location/Qualifiers
     source          1..2066
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 40.51 cM"
     gene            1..2066
                     /gene="Tchhl1"
                     /gene_synonym="5430400H23Rik; S100a17; Thhl1"
                     /note="trichohyalin-like 1"
                     /db_xref="GeneID:71325"
                     /db_xref="MGI:MGI:1918575"
     exon            1..55
                     /gene="Tchhl1"
                     /gene_synonym="5430400H23Rik; S100a17; Thhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            56..217
                     /gene="Tchhl1"
                     /gene_synonym="5430400H23Rik; S100a17; Thhl1"
                     /inference="alignment:Splign:2.1.0"
     exon            218..2066
                     /gene="Tchhl1"
                     /gene_synonym="5430400H23Rik; S100a17; Thhl1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2048..2053
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tchhl1"
                     /gene_synonym="5430400H23Rik; S100a17; Thhl1"
                     /note="putative"
     polyA_site      2066
                     /gene="Tchhl1"
                     /gene_synonym="5430400H23Rik; S100a17; Thhl1"
                     /note="putative"
ORIGIN      
        1 acagcccgct gccccacatt gccccacatt ccgcttgctc tcactcctga acgagcccct
       61 ttctgagttt gcaaagatgc caaggctcct gagaggtgtc ttctgtgtcg ttgagatatt
      121 ccacaagtac gccattgagg atggcggcaa ccaggcaaca ctgacccgca cagagctgag
      181 acagctcctt gagggagaaa ttggggactt ccttcagcca catgtctttc atgctgtgga
      241 gagaaagttg aaccttctga attttgacag agatggtacc atcagttttg aggaatttgt
      301 tcttgcaatc ttcagcttat tgaatccctc ttattttgac atatcattac taaattcaga
      361 accaagactg atgtctaaat cagagaagat agatgctgtg gatttggggg caattggtgg
      421 aaacattcag caggtagtag gggttgggcc aactcaagaa aggctcatat ttccatcaga
      481 aatggcatca tcaggtcagc ccagcaatga agaaggtgag gtaggtgatg agcctatggt
      541 gagcccatgt gaagacatta agacccacag cctgccaaga aatgtgtctg agccaaatga
      601 ccctgagaac caacagccaa aagaagatgc tcaggaagtc gcacaaaatg taccagcaac
      661 tgaatatgat ggagtccaat ttaagagaaa tacagtagtc gaagtaccca aacagagcac
      721 cagtccaaca caggagatcc caagagaaag aagtaaacca tccaggaggc taagtgacac
      781 caagataagt gaccatatga ttcagaggcc aactgaagat gaggaacata cttctacaac
      841 acaagatcca ttcctgcaaa aaagagacaa agccaccggg tcagagaaca ctgatttgtc
      901 agtagtagct gctaccagga aatcatctca aacacaggaa atttttgagc ctatggatga
      961 tactaaacta tctgaggctc aagaaactgg aaaggatgct ggcagaatac cacctgaaac
     1021 aaatttagag gagcccaaag ctgatgctaa agtagctgag agccacggat tgccagcaca
     1081 agaaagagaa cacaatacaa gggaccagtc tgttcaaagc cggagcagaa atgtttcaga
     1141 aacatctagt agaggagaac aggaggggga gtggaaagaa catgaaagaa taactctatc
     1201 cccaacagca gatgctgaaa cacaggatga gaagtgtcaa gaatttccag gatcatggag
     1261 ggaaaacgat gccaaaaagg actctgctgc aaaagatcca agttctgaag aaggaaatca
     1321 gaatctccct gaaattaagg aagattctgt ctcaggaaaa gaagcaagac acagtgagga
     1381 agacacagta tatgcatttg aaatcaacaa aaacagccct gcagctgaag agacattgga
     1441 aacaagagaa aggtcccagg agctggcacc acttgagaag caatctcaaa gaaaaaagca
     1501 cagggccacc aggattcagg acaagccggt caggaaggag gaccacaatg agggagaaga
     1561 ttctgagtta tcacttacac agagtgatga gggcttttgt gaaattccca acagcctggc
     1621 tccagaggta ggtaagagca gctcagagat agctgaacca catgtaccag aggattcaca
     1681 gagtcagata gaccaccatg gagatgctaa gcaagaaagt cacactaaca acccagatcc
     1741 ccagaagcag ggagcaccag gtgagagcag cagagagcag gaggcagtag tgctgtcaat
     1801 ccaagaagat gggcagctcc cagagggaca ggaacagtct gccagagatg gtctgcatga
     1861 tggtctgagc tcaaggacca aaggaggccc aggggcagct gtggagccca gtgagggaga
     1921 ggaggtacag gaggccacag cagggagaga aaacaggaaa gccctagagg cagagagttt
     1981 ggaggcccag tgagtctact gaatgttgat ctgtttggct tgatggatac ttggattaaa
     2041 ctcgataatt aaataacttg atgatc
//
