LOCUS       NM_001037878            2178 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus transcription factor 25 (basic helix-loop-helix)
            (Tcf25), transcript variant 3, mRNA.
ACCESSION   NM_001037878
VERSION     NM_001037878.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Zhang,X., Lei,F., Wang,X.M., Deng,K.Q., Ji,Y.X., Zhang,Y., Li,H.,
            Zhang,X.D., Lu,Z. and Zhang,P.
  TITLE     NULP1 Alleviates Cardiac Hypertrophy by Suppressing NFAT3
            Transcriptional Activity
  JOURNAL   J Am Heart Assoc 9 (16), e016419 (2020)
   PUBMED   32805187
REFERENCE   3  (bases 1 to 2178)
  AUTHORS   Memic,F., Knoflach,V., Morarach,K., Sadler,R., Laranjeira,C.,
            Hjerling-Leffler,J., Sundstrom,E., Pachnis,V. and Marklund,U.
  TITLE     Transcription and Signaling Regulators in Developing Neuronal
            Subtypes of Mouse and Human Enteric Nervous System
  JOURNAL   Gastroenterology 154 (3), 624-636 (2018)
   PUBMED   29031500
REFERENCE   4  (bases 1 to 2178)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   5  (bases 1 to 2178)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Aizawa,H., Yuasa,S.,
            Nakajima,D., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: II. The complete nucleotide sequences of 400 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (1), 35-48 (2003)
   PUBMED   12693553
REFERENCE   6  (bases 1 to 2178)
  AUTHORS   Olsson,M., Durbeej,M., Ekblom,P. and Hjalt,T.
  TITLE     Nulp1, a novel basic helix-loop-helix protein expressed broadly
            during early embryonic organogenesis and prominently in developing
            dorsal root ganglia
  JOURNAL   Cell Tissue Res 308 (3), 361-370 (2002)
   PUBMED   12107429
  REMARK    GeneRIF: The complex expression pattern and unique protein
            sequence, including an acidic amino terminal and putative
            transcription activation domain, suggests that Nulp1 may have a
            distinct role in embryonic development of many organs, including
            the adult brain.
REFERENCE   7  (bases 1 to 2178)
  AUTHORS   Kremmidiotis,G., Gardner,A.E., Settasatian,C., Savoia,A.,
            Sutherland,G.R. and Callen,D.F.
  TITLE     Molecular and functional analyses of the human and mouse genes
            encoding AFG3L1, a mitochondrial metalloprotease homologous to the
            human spastic paraplegia protein
  JOURNAL   Genomics 76 (1-3), 58-65 (2001)
   PUBMED   11549317
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122266.2.
            
            On Jan 31, 2022 this sequence version replaced NM_001037878.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC025071.1, AK088360.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-242               AC122266.2         92725-92966
            243-404             AC122266.2         100302-100463
            405-479             AC122266.2         101429-101503
            480-598             AC122266.2         102227-102345
            599-664             AC122266.2         103251-103316
            665-747             AC122266.2         107467-107549
            748-878             AC122266.2         108567-108697
            879-978             AC122266.2         109681-109780
            979-1072            AC122266.2         110483-110576
            1073-1165           AC122266.2         111824-111916
            1166-1271           AC122266.2         112034-112139
            1272-1431           AC122266.2         114453-114612
            1432-1519           AC122266.2         115909-115996
            1520-1678           AC122266.2         116885-117043
            1679-1769           AC122266.2         117418-117508
            1770-1849           AC122266.2         118167-118246
            1850-1922           AC122266.2         119527-119599
            1923-2178           AC122266.2         119978-120233
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 72.1 cM"
     gene            1..2178
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /note="transcription factor 25 (basic helix-loop-helix)"
                     /db_xref="GeneID:66855"
                     /db_xref="MGI:MGI:1914105"
     exon            1..242
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            243..404
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            405..479
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            480..598
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            599..664
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            665..747
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            748..878
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            879..978
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            979..1072
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1073..1165
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1166..1271
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1272..1431
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1432..1519
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1520..1678
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1679..1769
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1770..1849
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1850..1922
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     exon            1923..2178
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      2178
                     /gene="Tcf25"
                     /gene_synonym="1100001J13Rik; 1810041K11Rik; D8Ertd325e;
                     mKIAA1049; Nulp1"
                     /note="major polyA site"
ORIGIN      
        1 acactgctgc tcttcctcgt ccctctgccc acatcaggct gtcgggtcct atgtcgcgcc
       61 gggccctccg gagactgagg ggggaacagc gcggccagga acccctaggg cccgacgcct
      121 tgaagtttgt cctccttgat gacgatgacg cagaggaaga gggaccaaaa ccggggctgg
      181 gtggccggcg ccccgggggt gcagggaagg aaggagtccg tgtcaacaac cggtttgagc
      241 tgataaacac ggaggatctt gaggatgacc ttgtggtaaa tggggagaga tctgactgta
      301 ccctgccgga ctctgtgtca tcagggaaca aaggaagggc taaacatgga aacgcagaga
      361 ccaagcaaga tggaggggcc accaaagcag ggtcctcgga acagtctaat gcaagtggca
      421 aactccgaaa gaagaaaaag aagcagaaaa ataagaaaag ctgcacagga gaatcctcgg
      481 agaatggact agaagacatc gatcgcatct tagagcggat tgaggacagc agtgggttca
      541 gccaccccgg cccccctcca ctgagctcca ggaagcacgt cctatatgtg gagcacagac
      601 acctgaatcc agacacggaa ctgaagaggt attttggtgc tcgagcggtc ctgggcgagc
      661 aaaggcctcg acagaggcag cgtgtgtatc ccaagtgtac atggctgacg acccctaaga
      721 gcacctggcc ccggtacagc aaaccaggtc tatcaatgcg gctgctggag tccaagaaag
      781 gcctttcttt ctttgcattt gaccataatg aagaatacca acaagcacag cacaagttcc
      841 tggtggctgt ggagtccatg gagccaaata acattgtggt tctgctccag acaagcccct
      901 atcatgtgga ctccctgctg cagctcagtg atgcctgccg ctttcaagag gatcaagaga
      961 tggctcgaga ccttatagag agagccctgt acagcatgga gtgtgcattc caccccttgt
     1021 tcagtctcac cagtggaact tgcaggctgg attatcgcag acctgagaat aggagcttct
     1081 acctgaccct ctacaagcag atgagtttct tggagaaacg tggatgccca cgtactgcgc
     1141 tggagtactg caagctcatc ctgagccttg agccagatga ggaccccctg tgcatgttgc
     1201 tgcttattga ccacctggcc ttacgggccc ggaactatga atacctgatt cgcctcttcc
     1261 aggaatggga ggctcatcgg aacctgtccc agctcccaaa ttttgccttc tcagttccac
     1321 tggcctattt ccttctgagt cagcaaacag acttacctga gcatgagctc agctctgcca
     1381 ggcaacaggc ttccctcctg atacagcagg cactcaccat gttccctgga gttcttatgc
     1441 cactgctgga gtattgcagt gtgcgacctg atgccacggt ctcaaaccac cgcttctttg
     1501 ggccggatgc tgagatcagc cagcctcccg ccttgggcca gctggtgagt ctgtacctgg
     1561 ggaggtcaca ctttctttgg aaagaacccg ccattatgag ctggctagag gaaaatgtcc
     1621 atgaggttct gcaagcggtg gatgctggag accctgctgt ggaggcctgt gagaacaggc
     1681 ggaaagtgtt gtaccagcgt gcgcccagaa acatccaccg ccacgtgata ctgtctgaga
     1741 tcaaggaggc tgttgctgcc ctaccctcgg atgtgaccac acagtctgtg atggggttcg
     1801 accctctgcc tcccctggac accatctact cttacgtcag accagagagg ctgagtccag
     1861 tcagccacgg aaacacaatc gccctcttct tccggtcctt gttgccaaat tacaccacag
     1921 agggggagag gctggaggaa ggagtggccg ggggtccgaa ccgcaatcaa ggcttgaaca
     1981 ggctgatgtt ggccgtacgt gacatgatgg ccaacttcca cttcaacgac ctggaggtgc
     2041 ctcgggagga caatcctgag ggcgaggggg actgggactg aactgtccag atgctgtgcc
     2101 cagagccgtg cagtcacgtt cccgaattca tttctggttg gagttaacca gttccgagta
     2161 gaaatgctga ccatgcca
//
