LOCUS       NM_009328                949 bp    mRNA    linear   ROD 29-OCT-2024
DEFINITION  Mus musculus transcription factor 15 (Tcf15), mRNA.
ACCESSION   NM_009328
VERSION     NM_009328.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Oikonomakos,I., Tedesco,M., Motamedi,F.J., Peitzsch,M., Nef,S.,
            Bornstein,S.R., Schedl,A., Steenblock,C. and Neirijnck,Y.
  TITLE     In vitro differentiation of mouse pluripotent stem cells into
            corticosteroid-producing adrenocortical cells
  JOURNAL   Stem Cell Reports 19 (9), 1289-1303 (2024)
   PUBMED   39178848
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Dumas,C.E., Rousset,C., De Bono,C., Cortes,C., Jullian,E.,
            Lescroart,F., Zaffran,S., Adachi,N. and Kelly,R.G.
  TITLE     Retinoic acid signalling regulates branchiomeric neck muscle
            development at the head/trunk interface
  JOURNAL   Development 151 (16) (2024)
   PUBMED   39082789
REFERENCE   3  (bases 1 to 949)
  AUTHORS   Pappas,M.P., Kawakami,H., Corcoran,D., Chen,K.Q., Scott,E.P.,
            Wong,J., Gearhart,M.D., Nishinakamura,R., Nakagawa,Y. and
            Kawakami,Y.
  TITLE     Sall4 regulates posterior trunk mesoderm development by promoting
            mesodermal gene expression and repressing neural genes in the
            mesoderm
  JOURNAL   Development 151 (5) (2024)
   PUBMED   38345319
REFERENCE   4  (bases 1 to 949)
  AUTHORS   Tekko,T., Lozovska,A., Novoa,A. and Mallo,M.
  TITLE     Assessing Myf5 and Lbx1 contribution to carapace development by
            reproducing their turtle-specific signatures in mouse embryos
  JOURNAL   Dev Dyn 251 (10), 1698-1710 (2022)
   PUBMED   35618666
REFERENCE   5  (bases 1 to 949)
  AUTHORS   Rodriguez-Fraticelli,A.E., Weinreb,C., Wang,S.W., Migueles,R.P.,
            Jankovic,M., Usart,M., Klein,A.M., Lowell,S. and Camargo,F.D.
  TITLE     Single-cell lineage tracing unveils a role for TCF15 in
            haematopoiesis
  JOURNAL   Nature 583 (7817), 585-589 (2020)
   PUBMED   32669716
  REMARK    GeneRIF: Single-cell lineage tracing unveils a role for TCF15 in
            haematopoiesis.
REFERENCE   6  (bases 1 to 949)
  AUTHORS   Hidai,H., Quertermous,E.E., Espinosa,R. 3rd, LeBeau,M.M. and
            Quertermous,T.
  TITLE     Genomic organization and chromosomal localization of the gene TCF15
            encoding the early mesodermal basic helix-loop-helix factor
            bHLH-EC2
  JOURNAL   Genomics 30 (3), 598-601 (1995)
   PUBMED   8825648
REFERENCE   7  (bases 1 to 949)
  AUTHORS   Zhang,L.Y., Levitt,R.C. and Kleeberger,S.R.
  TITLE     Differential susceptibility to ozone-induced airways
            hyperreactivity in inbred strains of mice
  JOURNAL   Exp Lung Res 21 (4), 503-518 (1995)
   PUBMED   7588439
REFERENCE   8  (bases 1 to 949)
  AUTHORS   Blanar,M.A., Crossley,P.H., Peters,K.G., Steingrimsson,E.,
            Copeland,N.G., Jenkins,N.A., Martin,G.R. and Rutter,W.J.
  TITLE     Meso1, a basic-helix-loop-helix protein involved in mammalian
            presomitic mesoderm development
  JOURNAL   Proc Natl Acad Sci U S A 92 (13), 5870-5874 (1995)
   PUBMED   7597044
REFERENCE   9  (bases 1 to 949)
  AUTHORS   Burgess,R., Cserjesi,P., Ligon,K.L. and Olson,E.N.
  TITLE     Paraxis: a basic helix-loop-helix protein expressed in paraxial
            mesoderm and developing somites
  JOURNAL   Dev Biol 168 (2), 296-306 (1995)
   PUBMED   7729571
REFERENCE   10 (bases 1 to 949)
  AUTHORS   Quertermous,E.E., Hidai,H., Blanar,M.A. and Quertermous,T.
  TITLE     Cloning and characterization of a basic helix-loop-helix protein
            expressed in early mesoderm and the developing somites
  JOURNAL   Proc Natl Acad Sci U S A 91 (15), 7066-7070 (1994)
   PUBMED   8041747
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC027533.1.
            
            On Aug 5, 2006 this sequence version replaced NM_009328.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC027533.1, BI415438.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..949
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="CZECHII"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 74.83 cM"
     gene            1..949
                     /gene="Tcf15"
                     /gene_synonym="bHLH-EC2; Meso1"
                     /note="transcription factor 15"
                     /db_xref="GeneID:21407"
                     /db_xref="MGI:MGI:104664"
     exon            1..530
                     /gene="Tcf15"
                     /gene_synonym="bHLH-EC2; Meso1"
                     /inference="alignment:Splign:2.1.0"
     CDS             18..605
                     /gene="Tcf15"
                     /gene_synonym="bHLH-EC2; Meso1"
                     /note="paraxis; TCF-15; protein bHLH-EC2"
                     /codon_start=1
                     /product="transcription factor 15"
                     /protein_id="NP_033354.2"
                     /db_xref="CCDS:CCDS16878.1"
                     /db_xref="GeneID:21407"
                     /db_xref="MGI:MGI:104664"
                     /translation="MAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGL
                     EAARRGPGPGSGRRASNGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPV
                     DRKLSKIETLRLASSYIAHLANVLLLGDAADDGQPCFRAAGGGKSAVPAADGRQPRSI
                     CTFCLSNQRKGGSRRDLGGSCLKVRGVAPLRGPRR"
     exon            531..932
                     /gene="Tcf15"
                     /gene_synonym="bHLH-EC2; Meso1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      911..916
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tcf15"
                     /gene_synonym="bHLH-EC2; Meso1"
                     /note="hexamer: AATAAA"
     polyA_site      932
                     /gene="Tcf15"
                     /gene_synonym="bHLH-EC2; Meso1"
                     /note="major polyA site"
ORIGIN      
        1 cccgcggccg ggcgcccatg gcgttcgcgc tgctgcgccc ggtcggcgcg cacgtgctgt
       61 acccggacgt gaggctgctg agcgaggacg aggagaaccg cagcgagagc gacgcgtcgg
      121 accagtcgtt cggctgctgc gaagggctgg aggcggcacg gcgtggcccg ggtcccggga
      181 gcgggcggcg ggcgagcaac ggcgcgggcc ccgtggtggt ggtgcggcag cgacaggcgg
      241 ccaacgcgcg cgagcgagac cgcacgcaga gcgtgaacac ggccttcacc gccctgcgca
      301 cgctcatccc caccgagccc gtggaccgaa agctgtctaa gatcgagacg ctgcgtctgg
      361 cgtccagcta catcgcccac ctggccaacg tgctgctgct gggcgacgcg gccgacgacg
      421 ggcagccgtg tttccgcgcg gcgggcggtg gcaagagcgc ggtccccgcc gccgacggcc
      481 gtcagccgcg ctccatctgc accttctgtc tcagcaacca gcgcaagggg ggcagccgtc
      541 gtgacctggg gggcagctgc ttgaaagtga ggggtgtagc cccgctccga gggcctcggc
      601 gatgaacctg gatccctggt tttctccaag aaggactcca gagaaagagg ccatgagcca
      661 gcccctagct ggacagagga gaagattcca gaagcccaaa ccactcctgc gttgtgtaag
      721 gaccggagga caatggcctg ggcacagggc tcaccctgga gagccacaag gacccatcta
      781 gccatccagg cctagctggc cagggacaag gcagaaattt tagaaaacca aagactattt
      841 ttgaaagtgt gtgtgtgtgt ctgtgtgtct gtgtgaatgt agtatgtgag caaatcgggg
      901 agggggtcaa aataaaggta tttttaaata aaaaaaaaaa aaaaaaaaa
//
