LOCUS       NM_011712               1018 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus transcription elongation factor A like 9 (Tceal9),
            mRNA.
ACCESSION   NM_011712
VERSION     NM_011712.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1018)
  AUTHORS   Navas-Perez,E., Vicente-Garcia,C., Mirra,S., Burguera,D.,
            Fernandez-Castillo,N., Ferran,J.L., Lopez-Mayorga,M.,
            Alaiz-Noya,M., Suarez-Pereira,I., Anton-Galindo,E., Ulloa,F.,
            Herrera-Ubeda,C., Cusco,P., Falcon-Moya,R., Rodriguez-Moreno,A.,
            D'Aniello,S., Cormand,B., Marfany,G., Soriano,E., Carrion,A.M.,
            Carvajal,J.J. and Garcia-Fernandez,J.
  TITLE     Characterization of an eutherian gene cluster generated after
            transposon domestication identifies Bex3 as relevant for advanced
            neurological functions
  JOURNAL   Genome Biol 21 (1), 267 (2020)
   PUBMED   33100228
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1018)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1018)
  AUTHORS   Bedford,M.T., Chan,D.C. and Leder,P.
  TITLE     FBP WW domains and the Abl SH3 domain bind to a specific class of
            proline-rich ligands
  JOURNAL   EMBO J 16 (9), 2376-2383 (1997)
   PUBMED   9171351
REFERENCE   5  (bases 1 to 1018)
  AUTHORS   Chan,D.C., Bedford,M.T. and Leder,P.
  TITLE     Formin binding proteins bear WWP/WW domains that bind proline-rich
            peptides and functionally resemble SH3 domains
  JOURNAL   EMBO J 15 (5), 1045-1054 (1996)
   PUBMED   8605874
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BU511227.1 and AL671493.12.
            
            On Aug 29, 2006 this sequence version replaced NM_011712.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY085948.1, AK017717.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-776               BU511227.1         32-807
            777-1018            AL671493.12        40243-40484
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 57.53 cM"
     gene            1..1018
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /note="transcription elongation factor A like 9"
                     /db_xref="GeneID:22381"
                     /db_xref="MGI:MGI:109567"
     exon            1..148
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /inference="alignment:Splign:2.1.0"
     exon            149..214
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /inference="alignment:Splign:2.1.0"
     exon            215..1018
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /inference="alignment:Splign:2.1.0"
     CDS             245..559
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /note="WBP-5; schlafen 8-interacting protein; TCEA-like
                     protein 9; WW domain binding protein 5; transcription
                     elongation factor S-II protein-like 9"
                     /codon_start=1
                     /product="transcription elongation factor A protein-like
                     9"
                     /protein_id="NP_035842.1"
                     /db_xref="CCDS:CCDS30418.1"
                     /db_xref="GeneID:22381"
                     /db_xref="MGI:MGI:109567"
                     /translation="MKPCQKMEGNLEKEDEPKPEEEPKPEEKPEEGQEPEEEEKSEET
                     FRERLIRSLQDFQEDIHNRHLSSDDLFRDVEELDEIRKVRNKLIVTRWKANRSHPYPY
                     LM"
     regulatory      900..905
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /note="hexamer: TATAAA"
     polyA_site      920
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /note="major polyA site"
     regulatory      990..995
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /note="hexamer: AATAAA"
     polyA_site      1015
                     /gene="Tceal9"
                     /gene_synonym="Wbp5"
                     /note="major polyA site"
ORIGIN      
        1 gtagatctca tgtgaccagg agtcgacgtg tgcagaaatc ctgctagtct ggtccttgtt
       61 tccatctggg taccagctcc ctttagcctt gcagacggtg gtgcgagagg ccagcggcca
      121 gaagagacag cttgcttcaa ttcatcaggt ttgttctttg taccgcacca ggctaaaata
      181 agtaggaaaa agaaatcgac cagatctgta cctggaagca gcaaagaaga gaagcagaca
      241 caagatgaaa ccctgccaaa aaatggaagg aaacctagaa aaggaggatg agccaaagcc
      301 tgaggaagag ccaaagccgg aggaaaagcc cgaggagggg caggaacccg aggaggagga
      361 gaaatccgaa gaaacttttc gggagaggct gatccggtct ctgcaggatt ttcaggagga
      421 tatacacaac aggcacctga gcagtgatga tctgtttaga gatgtggagg agctagatga
      481 gatcaggaaa gtgagaaaca aacttatagt gacgcgttgg aaggctaacc gaagccatcc
      541 ttacccctat ttaatgtagc ttggcttgct ttccctttta tctgatgtta ccattgcgat
      601 ctagctttct tttcattagc attttcctga taagaccttt gcccatcttc ctactttgaa
      661 tctgttgctg ttagtggctt tagctgtatc tcttgttgtc tgtatcttac tgttgattat
      721 atttgaacca atctataagt ctctggcttt aagctttact gatttgtaaa aaaaaaagaa
      781 aaaaaagaat aacaaaatga gcttctgatg ggatacaaaa tgagaaaagg ttacaaaata
      841 atatgggaat atcatatttt gaaagacagg agtacctttg tatgttacat atatgcacat
      901 ataaacttgt gaaagatgaa tgatttttct tctgcttatt tgtatttgcc atattcctaa
      961 aatgaacacg cattattctt gctaaaaata ataaaggttt tataactaaa aataagaa
//
