LOCUS       NM_001042655            2601 bp    mRNA    linear   ROD 20-DEC-2022
DEFINITION  Mus musculus TBC1 domain family, member 17 (Tbc1d17), mRNA.
ACCESSION   NM_001042655
VERSION     NM_001042655.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2601)
  AUTHORS   Chu CC and Paul WE.
  TITLE     Expressed genes in interleukin-4 treated B cells identified by cDNA
            representational difference analysis
  JOURNAL   Mol Immunol 35 (8), 487-502 (1998)
   PUBMED   9798653
REFERENCE   2  (bases 1 to 2601)
  AUTHORS   Chu CC and Paul WE.
  TITLE     Fig1, an interleukin 4-induced mouse B cell gene isolated by cDNA
            representational difference analysis
  JOURNAL   Proc Natl Acad Sci U S A 94 (6), 2507-2512 (1997)
   PUBMED   9122225
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC017607.1, AK136705.1 and AC158231.2.
            
            [WARNING] On May 2, 2023 this sequence was replaced by
            NM_001042655.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC035449.1, AK083153.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1752              BC017607.1         1-1752
            1753-2344           AK136705.1         1578-2169
            2345-2601           AC158231.2         113475-113731       c
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7"
     gene            1..2601
                     /gene="Tbc1d17"
                     /note="TBC1 domain family, member 17"
                     /db_xref="GeneID:233204"
                     /db_xref="MGI:MGI:2449973"
     exon            1..231
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     CDS             211..2148
                     /gene="Tbc1d17"
                     /codon_start=1
                     /product="TBC1 domain family member 17"
                     /protein_id="NP_001036120.1"
                     /db_xref="CCDS:CCDS39944.1"
                     /db_xref="GeneID:233204"
                     /db_xref="MGI:MGI:2449973"
                     /translation="MEGSSYRVVFEKGGVYLHTSARKHQDPDSLIAGVIRVVEKDSDV
                     FLHWAPVEEAGDPTQILFKKDPSRGEPSTSEEEPTFDPGYEPDWAVISTVRPQPHLAE
                     PRKGAEPSSSRSSWAFSVSLGELKSIRRSKPGLSWAYLVLVTQAGGSLPALHFHRGGT
                     RALLRVLSRYLLLASSPQDSRLYLVFPQDPSALSDSFHHLQLFDQDSSNVVSRFLQDP
                     YSTTFSSFSRVTNFFRGALQPHPEGASSPNLPPLPDDEPEPGFEVISCVELGQRPTVE
                     RAPPVTEEEWNRYVGPEGRLQNVPELKNRIFSGGLSPGLRREAWKFLLGYLSWESSAE
                     EHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGP
                     ENPGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHG
                     NFEESQETMKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPD
                     VLRLWEVLWTGLPGPNLHLLVACAILDMERDTLMLSGFGSNEILKHINELTMKLSVED
                     VLTRAEALYRQLTACPELPHNVQEILGLAQPEEPSSPSPPVSPMPLSPTRAPLPPPLP
                     EEVIPQPDSSLEILPEDEDGA"
     exon            232..330
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            331..402
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            403..526
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            527..734
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            735..846
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            847..1008
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1009..1137
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1138..1241
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1242..1336
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1337..1453
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1454..1554
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1555..1654
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1655..1752
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1753..1869
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1870..1956
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     exon            1957..2601
                     /gene="Tbc1d17"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2326..2331
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Tbc1d17"
                     /note="putative"
     polyA_site      2344
                     /gene="Tbc1d17"
                     /note="putative"
ORIGIN      
        1 cccttgccaa ctttgcgttc tacacctcgt gacctatgtc ttcgagtttc tactaccctg
       61 ttcaaacaga tggtctcacc cactgcagcc ttaacaacct cggggacgct accactatct
      121 agcctggaag ggagcgttat ttttccggat atgacaccaa gttgacccgg aaaaggagga
      181 gataggggca gtggaacctc cgcggcggca atggaaggat ccagctacag ggtggtgttt
      241 gaaaagggag gcgtgtacct gcacaccagc gcccggaaac accaggatcc agactcgctc
      301 atcgccggcg tcatacgagt ggtggaaaag gacagcgacg tctttctgca ctgggctccg
      361 gtggaggagg ctggagaccc aacccagatt ctcttcaaga aggacccgag tcggggtgag
      421 cccagcacct cagaggagga acctaccttt gacccaggct atgaacctga ctgggctgtc
      481 attagcacgg tgcggccaca gccccacctg gcagagccca ggaaaggtgc agagcccagt
      541 tcctcccgga gctcctgggc cttctccgtg agcctggggg agctcaagtc catccgcaga
      601 tccaagccag gcctcagctg ggcctacctg gtcctggtga cccaggctgg aggctccctg
      661 cctgccttac actttcacag agggggtacc cgagccctgc tccgagtcct tagccgatac
      721 ctgctgttgg ccagctctcc acaggactcc cgcctctact tggtcttccc ccaggacccc
      781 tctgccctgt ccgactcctt ccaccacctg cagctctttg accaggacag ctccaatgtg
      841 gtgtctcgtt tccttcagga cccctactcc accaccttca gtagcttctc tcgagtgacc
      901 aacttcttcc ggggagccct acagccgcac cctgagggcg cctcctcccc taacctaccc
      961 ccgctgccag atgatgaacc agagcctggc tttgaggtca tttcttgcgt ggagctgggg
     1021 cagcgtccca cagtggagcg tgctcctcca gtcacagagg aagagtggaa ccgctacgtg
     1081 ggccccgagg gtcgcctgca gaatgtccct gagttgaaaa accggatctt ctcaggcggt
     1141 ctcagccctg gcctacgtcg agaggcttgg aagttccttc tggggtacct tagctgggag
     1201 agctcagctg aagagcacaa ggcgcatgtg cggaagaaaa cggatgagta cttccgaatg
     1261 aagctgcagt ggaagtctgt gagtgctgag caggagcgga ggaactcact gctgcatgga
     1321 taccgaagcc tcattgagag agatgtaagc cgcacggaca ggactaacaa gttctatgaa
     1381 ggccctgaga accctgggct gagcctgctc catgatatcc ttcttaccta ctgcatgtac
     1441 cacttcgact tgggctacgt tcagggtatg agtgacctcc tgtccccgat cctcttcgtt
     1501 gttcagaacg aagtagatgc cttctggtgt ttctgcggct tcatggaact tgtgcatggg
     1561 aactttgaag agagtcagga gactatgaag cggcagcttg ggcagctcct gctgcttctg
     1621 cgggtgctgg atcagccact ctgtgatttc ctggattctc aggactcggg ctcgctgtgc
     1681 ttctgtttcc ggtggctgct catctggttc aagagggaat tcccctttcc tgatgtcctc
     1741 cggctgtggg aggtgctgtg gacagggctt cctggcccca atttgcacct gctggtggcc
     1801 tgtgccatct tggatatgga acgggacacc ctgatgctgt ctggctttgg ctccaatgag
     1861 atccttaagc acatcaatga actgaccatg aagctgagtg tggaggatgt gctgacacgg
     1921 gcagaggctc tgtacaggca gctgacggcc tgcccagagc tgccacacaa tgtgcaggag
     1981 atcctggggc tggcacagcc agaagagcct agtagcccat ctcctccggt atctccgatg
     2041 cccttgtcac ctactcgggc cccgttgccc ccgccgctgc ctgaggaagt gatcccgcag
     2101 cctgacagca gtcttgagat tctgcctgag gacgaggatg gcgcctgact cctagcccgg
     2161 tgcatctgac cgggttcctg cagattgaca ggtcctgagc tccatgtcca tggaggaggc
     2221 ctggagcgaa gtgagaccat gagccggcca atgaaatgga ggaaggtcct cctagaggtc
     2281 cgggattccc gagtgcccgc ccaccagctg ctgccattgt gaggcaataa accgttcttg
     2341 gttgactgcg ctggctggca tcaggacact ttgcttttcc catcttgctc atagcccatg
     2401 ctggcctcaa ggttgctggg tttttgttcc agtcaggatc tgtcagcacc ccagcatcca
     2461 atggcttctg atctcttcac cacggtgtag tgttcattca ctcaagtgtc gccccaccta
     2521 gggcagttat attctggaaa ccagtgcatt gtggagggaa gtgagcctgt ggtttaacaa
     2581 aaataacttt attgtgggct a
//
