LOCUS       XM_006521196            2309 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus trafficking regulator and scaffold protein
            tamalin (Tamalin), transcript variant X1, mRNA.
ACCESSION   XM_006521196
VERSION     XM_006521196.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000081.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006521196.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="15"
     gene            1..2309
                     /gene="Tamalin"
                     /gene_synonym="Grasp"
                     /note="trafficking regulator and scaffold protein tamalin;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 112 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 28 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:56149"
                     /db_xref="MGI:MGI:1860303"
     CDS             649..1569
                     /gene="Tamalin"
                     /gene_synonym="Grasp"
                     /codon_start=1
                     /product="general receptor for phosphoinositides
                     1-associated scaffold protein isoform X1"
                     /protein_id="XP_006521259.1"
                     /db_xref="GeneID:56149"
                     /db_xref="MGI:MGI:1860303"
                     /translation="MLQPGGPNWGLRKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEM
                     VTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYG
                     TSIRKAELEARLQYLKQTLYEKWGEYRSLMVQEQRLVHGLVVKDPSIYDTLESVRSCL
                     YGAGLLPGSLPFGPLLAAPGSARGGARRAKGDTDDAVYHTCFFGGAEPQALPPPPPPA
                     RALGPSSAETPASVLFPAPRSTLSRSASVRCAGPGGGGGAPGALWTEAREQALCGAGL
                     RKTKYRSFRRRLLKFIPGLNRSLEEEESQL"
ORIGIN      
        1 tgctttccag gtgctgggct taaaaaaagg catgcaccac cgtgcccagc ttatttcaat
       61 atcttaaagg gttataaaaa caaagaataa tatatgacag aggccataca gggcccacaa
      121 aacctaaaat attcgctatc tggctcttgc cagtaaaagt tcgcagaccc ttccaggaac
      181 ccagaaagca ctgggacaga cagagaactt ccactgctcc tgccccacaa catacggggc
      241 tcccaaggaa gagaagtatc ttgcacagcc ttaggtggca ggggctgtga ctcaggatag
      301 aagctagagg cctcgtctcc agggcctttc tgaggctgcc agactcaaag aggctttcgc
      361 agccacttta ttctgcctct ggctggtgga aaggaagggg aaggggtggg caaaggaaac
      421 tctgggctcc cccatcagcc taggatctgg agcagttcca gaccattgtg tccagcaggc
      481 tgccttcagt tcgggaaggg gtggccccag gctcccctcc cccagccctc acatctggtg
      541 ggctggccgc accacagctg ggaggagcag ctgtggtgtg gtctgcgccc agcctcgtga
      601 ctgctcccgg ggctggagct ctgttttctc caaagcatca gagccaggat gctccagcct
      661 ggggggccaa attggggcct tcggaaggtt ctaactttgg agaaagggga caaccagacc
      721 tttggcttcg agatccagac atatggcctt caccaccgag aggagcagcg tgtagagatg
      781 gtgaccttcg tctgccgagt tcatgaatcc agccctgccc agctggctgg gctcacgcca
      841 ggggacacta ttgccagcgt caacggtctc aacgtggaag gcatccggca ccgggagatt
      901 gtcgatatca tcaaggcgtc tggcaacgtt ctcaggctgg aaactctgta cgggacgtcc
      961 attcggaagg cagaactgga ggcgcgcctg cagtacctta agcaaaccct gtacgagaag
     1021 tggggagaat acaggtcact tatggtacag gagcagcggc tagtacatgg cctggtggtg
     1081 aaagacccaa gcatctatga cacactggag tccgtgcgct cctgcctcta cggcgcaggc
     1141 ttgcttcccg ggtcgctgcc ctttgggcct ctgctcgccg cgcctgggag tgcccgcggg
     1201 ggtgcgcggc gggccaaagg ggacacagac gacgccgtgt accacacgtg cttctttggg
     1261 ggcgccgagc cgcaggcact gccacccccg ccaccccccg cgcgcgcgtt aggcccgagc
     1321 tccgcggaga cccccgcgtc cgtgctgttt cccgcacctc gctccacgct cagccgcagc
     1381 gccagtgtgc ggtgcgcggg cccgggcggc ggcgggggcg cgccgggcgc actctggact
     1441 gaggcccgcg agcaggccct gtgtggcgcc ggcctacgca agaccaagta ccgcagcttc
     1501 cgcagacggc tgctcaagtt catccccgga ctcaaccgct ccctggagga agaggagagc
     1561 cagctgtagg ggcgcgggtg ggcaggtggg aagtatttat ttatttattc atcgtaacag
     1621 cctgtgcaaa aagtaggggc ggtagtgtcg gtccaaggac cccgggagcc caaagctgcg
     1681 ggagagggtc cttgctagct ctggtctttc tggtcggttc attggcttgt ctgctgaaca
     1741 aaaaaaaaag gggggggggg ctagttgctt tctgccctcc cctaaaccac agcaggagct
     1801 ctacaggggg agaatagaca ctgggaattg ggagaaatct gggggaccaa agagggctgt
     1861 accaggctaa agtctgggtc agtcgtgcct tgtgggggtc ctgtcccaag aaaccctctc
     1921 ctcagatata ctggctcccc agcccttcct tagccttggg gagaggagat ccacgatgga
     1981 tcattcccca ccctacagag acagacagac agatacacac acacacacac acacacacac
     2041 acacacacac acatcaatgg accagtgggc cccaaggggg caaggtgctg gtcccctccc
     2101 tccaaccttg acccctaagg gcttaacccc tgtccagggg cctataacta agtggggtcc
     2161 tgccaggccg gggtcctggg ttctgtgctc cttggggaac aagaatgagt tcattcaggt
     2221 ggggtggggc agcctggact gttccaccgt tttctgcata tgttgcttct gaaccacaaa
     2281 ctgtataaaa ttgatgggtt ttttttgca
//
