LOCUS       XM_030255465            2351 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus TAFA chemokine like family member 4
            (Tafa4), transcript variant X1, mRNA.
ACCESSION   XM_030255465
VERSION     XM_030255465.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..2351
                     /gene="Tafa4"
                     /gene_synonym="C130034I18Rik; Fam19a4; Fam19a4 Tafa-4;
                     Tafa-4"
                     /note="TAFA chemokine like family member 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 26 long SRA reads, and 76% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     1 sample with support for all annotated introns"
                     /db_xref="GeneID:320701"
                     /db_xref="MGI:MGI:2444563"
     CDS             496..996
                     /gene="Tafa4"
                     /gene_synonym="C130034I18Rik; Fam19a4; Fam19a4 Tafa-4;
                     Tafa-4"
                     /codon_start=1
                     /product="chemokine-like protein TAFA-4 isoform X1"
                     /protein_id="XP_030111325.1"
                     /db_xref="GeneID:320701"
                     /db_xref="MGI:MGI:2444563"
                     /translation="MSVQGTLSRVPELRCLLPILRQSAPAPGRSLSSDRENDHLPVQD
                     TLGGIPERRCLLLMLRCFSAIRYSSGHHLIKPGTCEVVAVHRCCNKNRIEERSQTVKC
                     SCFPGQVAGTTRAQPSCVEAAIVIEKWWCHMNPCLEGEDCKVLPDSSGWSCSSGNKVK
                     TTKVTR"
ORIGIN      
        1 gtattctgtt gctaatgctc gcgtctatgg ttccagattt ctttcctagg gtttctatct
       61 ccagcgttgc ctcgctttgg gttttcttta ttgtgtctac ttcccttttt aggtctagta
      121 tggttttgtt catttccatc acctgtttgg atatgttttc ctgtttttct ataaggactt
      181 ctacctgttt gtttgtgttt tcctgctttt ctttaaggac ttgtaactct ttagcagtgt
      241 tctcctgtat ttctttaagt gagttattaa agttcttctt gatgtcctct accatcatca
      301 tgagatatac ttttaaatcc gggtctagct ttttggttgt gttggggtgc ccaggactag
      361 gtggcgtggg agtgctgcgt tctgatgatg gtgagtggtc ttgatttctg ttagtaggat
      421 tcttacgttt gcctttcgcc atctggtatt ctctggagct gtgcaggata tacttggcgg
      481 ggtcctggaa ccaagatgtc tgtgcagggt acactcagca gggtcccgga actaagatgt
      541 ctgctgccaa ttctcaggca aagcgctcct gcgccaggca ggtccctatc ctctgatcgg
      601 gaaaatgatc acctgcccgt gcaggataca ctaggcggga tcccggaacg gagatgtctg
      661 ctgttgatgc tcaggtgctt ctcagccatt cggtattcct caggtcacca cctgatcaag
      721 ccaggtacct gcgaggtggt cgccgtgcac cgctgctgca ataagaaccg catagaggag
      781 cgctctcaga cggtcaaatg ttcctgcttc ccaggccagg tggctggcac aactcgggca
      841 cagccttctt gtgttgaagc tgccattgtg attgagaagt ggtggtgcca catgaatcct
      901 tgcttggaag gagaggactg taaagtgctt ccagactctt cgggttggtc ctgtagcagt
      961 ggcaataaag tcaaaaccac caaggtgacc cggtagcaga cacaaaagtg ttttgacccc
     1021 gaggggcatc gggacgcaga gctgtgctgt gtggattacc agactagtga gaactcactc
     1081 accttggaac ttgctcagaa gttcatagcc aaaatatgtg cagtgtggaa ggtggcattt
     1141 acgtggctgt tcccgtttgt ctgctttgtg atctcatcac actgaactac agcttaggtg
     1201 gccactcaac tgaggtgtta cctggatctc aaaaggagcc tgcctagcac aagaaatgct
     1261 ggagaggaca tcggaggtgc taatgtggat ggagcagcgc tgggagaacc tggatcttct
     1321 tgttctcctt ttcccaagga acatggacag aagtacaaaa ggacccaggc cgatcctctt
     1381 ttaaatgtgt cccttagcca ttatacagaa ggcatgaaag cagtctaagt gacagaagat
     1441 ttggctcata tacgtgtgtt ctagattaaa gaatttgaat tatctggtgc aagaaattaa
     1501 ctttatgaac cttggagaat ggaaggactc attgggttac tatgtgcaca tttgtatttt
     1561 ttacttttga taatttgaca tgtttatctt cttagttcca ttcctacgtt agcagagatg
     1621 tagcagaagc tttgtaatcc tggtacactg gtggctgagt tctatggaaa gcagagtagc
     1681 accagaggtt tacaaccaaa gctttctcat ggcatattca caaaagatca tgtacctgtt
     1741 gggactttta tggcttgggg ttaatgagat aggagaatca tttaagacag aggacagtct
     1801 ctgtttagag gaagggtgat ttcttagatc tactttatgg gaatattttt attatctccg
     1861 agaagaagtc tttaaatgct aactattcac atgacagttg acgcaagcct aacagagtcc
     1921 cttctgtacc cgtttgttcg gtttcttact tctttaaatg ttaagtaaaa cctcagtcat
     1981 cttgcctcca atttcagtga tttcacagac actgccatgc agaaacataa gaaacaaaga
     2041 gacactggcc caggtttgaa atgatgttat tcatgtacac acatctgtaa tgtgggattg
     2101 attgtatgta ttaagaaatg ttgacagtat acttgctgcg ccaactgtct gtccttttgc
     2161 aattacaaag aaacataggt tctattatgt tgtctacagt gctatcaatt atttgatttt
     2221 cttgcagaag aagtgggaat gggtgctacc tgtttatagg ttaaactttg gtttgaactt
     2281 ggctgactgg gtgtctactg gaatagttat tctcatatga ctaagtaaaa tatcactctg
     2341 ttgatgacat a
//
