LOCUS       XM_006501350            5013 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus synaptotagmin XI (Syt11), transcript
            variant X3, mRNA.
ACCESSION   XM_006501350
VERSION     XM_006501350.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000069.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006501350.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5013
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="3"
     gene            1..5013
                     /gene="Syt11"
                     /gene_synonym="1500004A13Rik; 3632445O20Rik;
                     5430404N14Rik; 6530420C11Rik"
                     /note="synaptotagmin XI; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     mRNAs, 26 ESTs, 17186 long SRA reads, 4 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 20 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:229521"
                     /db_xref="MGI:MGI:1859547"
     CDS             723..2012
                     /gene="Syt11"
                     /gene_synonym="1500004A13Rik; 3632445O20Rik;
                     5430404N14Rik; 6530420C11Rik"
                     /codon_start=1
                     /product="synaptotagmin-11 isoform X2"
                     /protein_id="XP_006501413.1"
                     /db_xref="GeneID:229521"
                     /db_xref="MGI:MGI:1859547"
                     /translation="MAEITNIRPSFDVSPVAAGLIGASVLVVCVSVTVFVWTCCHQQA
                     EKKHKTPPYKFIHMLKGISIYPETLSNKKKIIKVRRDKDGPRRESGRGNLLINAESGL
                     LSHDKDPRGPSPASCMDQLPIKRDYGEELRSPMTSLTPGESKATSPSSPEEDVMLGSL
                     TFSVDYNFPKKALVVTIQEAHGLPVMDDQTQGSDPYIKMTILPDKRHRVKTRVLRKTL
                     DPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQL
                     TRDIIKRNIQKCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSDPYVKVNV
                     YYGRKRIAKKKTHVKKCTLNPVFNESFIYDIPTDLLPDISIEFLVIDFDRTTKNEVVG
                     RLILGAHSVTTSGAEHWREVCESPRKPIAKWHSLSEY"
ORIGIN      
        1 atgcgccaga tgatcggcgc catcatgttt tagggcctgg tgaagccaca gccctggagt
       61 gcgctaaaat aatagccatc aatactgaaa cagtatagaa ttttgctttt ctcaactcct
      121 cggacccaga aggttcagct tctagctata taaactcagg caactagaat tacagcttca
      181 gaagacgcta aagcgactat cttcctgccc ttctgtattt ggagacctat ccaagactgt
      241 ccttgactct ccttcctcac ccacttgagt gctatagtca caaggatgtg cgactgagct
      301 agctaaacac ctacacttct taatgggctt tgaaatttag ccacaaacgc ccacagcctg
      361 tgaatgggcg gagactcatc ctcggaaaaa ctcggcagtg ggcggggtct tctctcgaag
      421 agcttccgga atctttcggg cagaggcgga gtcttctgcc gagggccgtt cgggaagagg
      481 cggagcctat ctctcatcag gaccagtctg actgcacctg catccttagc tcagagcatc
      541 cctggagcat ctaagaggaa agcgcagcta gcaaccaggg atcgtactgc aggggcaatc
      601 ggccatgcac cttcccctcc cctgatctgg aggtctacag ccgcggcctc ggtactgacc
      661 gagattccca aagttgtctg acctctgcaa aagtgtttct atcaacagcc tctgattaca
      721 acatggctga gatcacaaat atacgcccca gctttgatgt gtcaccggta gcggctggcc
      781 tcatcggggc ctccgtgctg gtggtgtgtg tttcagtgac tgtctttgtg tggacgtgct
      841 gccaccagca ggcagagaag aagcacaaga ccccgccata caagttcatt catatgctga
      901 aaggcattag catctaccca gagaccctca gcaacaagaa gaaaatcatc aaagttcgga
      961 gagacaaaga tggccctcgg agggaaagtg gacgagggaa cctgttaata aacgcggagt
     1021 ctggcctgct gagccacgac aaggatccca gagggcctag ccctgcatct tgtatggacc
     1081 agttacccat caaaagagac tatggggaag aactgaggag ccccatgaca agcctgaccc
     1141 ctggtgagag caaagccacc tccccatcct cgccagagga agacgtgatg ttaggctctc
     1201 ttaccttctc cgtggactac aactttccca agaaagctct ggtggtgaca atccaagagg
     1261 ctcacgggct gccagtgatg gatgaccaga cccagggctc cgatccctac atcaaaatga
     1321 ccattctccc ggacaagcgg catcgagtga agacccgagt gcttcgcaag acgctggacc
     1381 cggtgttcga tgagaccttc accttctacg gcatcccgta cagccagctg caggacctgg
     1441 tgctgcattt cctggtgctc agctttgatc gattctctcg ggatgacgtc atcggagagg
     1501 tcatggtgcc attggctgga gtggacccca gcacaggcaa ggttcagctg accagggaca
     1561 tcatcaagag gaacattcag aagtgcatta gcagagggga actccaggta tctctgtcat
     1621 accagcccgt cgcacagaga atgacagtgg tggtcctcaa agccagacac ttgccgaaga
     1681 tggatatcac cggtctctca gatccttatg tcaaggtgaa cgtctactac ggcagaaaac
     1741 gcattgccaa gaagaaaacc catgtaaaga agtgcacttt gaaccccgtc ttcaatgagt
     1801 cgttcatcta tgacatcccc accgaccttc tgcctgatat cagcatcgag ttccttgtca
     1861 ttgacttcga tcgcactact aagaatgagg tggtagggag gctgatcttg ggggcacaca
     1921 gtgtcacaac cagtggtgcg gaacactgga gagaggtctg cgagagtccc cgcaagccca
     1981 tagccaagtg gcacagtctg agcgagtact aaccctgggg ccaggtgggg aggcacatgg
     2041 cggggagagg tgacagagaa gctgactcaa aacctcattt tagtcgtaga agaagatttc
     2101 ttacagaaca aaccacacga agaacctcac actccacaca gctgcagatt ggttcttagc
     2161 gtgaggattg ctttcttctt tgcaaggcac tagacgatct tttgttttta aaaatgaggg
     2221 gggaagagaa ggaaagaccc caagtctata tataacaatg taaccttata cttgcatgtc
     2281 taatacaaac aagaaattag cctaaccaat atcaagttgc agattttaat ccatgaaaat
     2341 tgtgttttgt gccgaattgt atttgctgat cccctgaaat tggcctctct ttatcaggct
     2401 tctctgggtt attccagtcc cccatcactg caggagaaaa gtctgccctt gtaaagcccc
     2461 gcgttcccgt catccagtcc ttttttctgt cacctctcac atctctgctc tttggctgag
     2521 ttccaaatcc tgaggtctgt agtaagcaaa gaaaagagtt gggtttccag gaaaaagagt
     2581 aattgagaat ggggtgtgtg ctgtaaaagg ctaacaggca gccagtgact agagatatcc
     2641 ccgtgagcac aggagaggtg gggctggact taggactcac tagctgattt ctctagttgc
     2701 tatggagata tcacctgggg agggacctgt gagcacagca tatcctgaat gcgacttgca
     2761 ggtcagggga cagaggagga aataagatgc ccacgtggcc ctctgtggta ggctcttcat
     2821 cggtggtcag cagtgctagg tttgaaaggt tacactggct tttacttttc cagagctgct
     2881 tctgaagctc tggtgtctcc acattatgta gctgccaaca caggttgctt tctgtctctt
     2941 aaggaaatgg gccccagaaa ggactctttc tccctgagtt ttacagtaat ggctcttaag
     3001 aaagccacgt gggccgggcg gtggtggcac acgcctttaa tcccagcact cgggaggcag
     3061 aggcaggcgg atttctgagt tcgaggccag cctggtctac aaagtgagtt ccaggacagc
     3121 cagggctaca cagagaaacc ctgtctcaaa aaaccaaaaa aaaaaaaaaa aaaaaaaaaa
     3181 aaaaaaaaaa agaagaaagc cacgtggggc tgagtagtaa gatcatgtga atgccttgag
     3241 agccccactc tcctcagcag aagcgcacgg ctggagaact gggagtctcc ccacacggtg
     3301 aagggtggaa accaaagttt caccatctct ctgccactgc acaacacagt gcagagcttg
     3361 cacactgtgc tgcagttcag atccaggtct ccacatggag gctttgggaa cgaggggtga
     3421 gagtggatgg gcagtgccga ctttgacagc ctgaagagga tctcagtcag atgagaaaca
     3481 gcttgatcca gggcctgaaa gattagctgt aactgaagtg cccacgtccc taaagaccgt
     3541 cactttctag cttgcttctg agaaggggtg gaccagctga ctttccatgg agagggttgg
     3601 tgacaatgcc tttggtggtt cccctcgtgc ttgtagatct gaatccactc tgcccccctg
     3661 caacctttca tttgcttttt gtttggttgg ttttgctttt gcttctgttt ttgtttgttt
     3721 ttgttttctg ccgactcttg gcaaggcaga gcagtgctgt acaggcaggc agccccactg
     3781 tgctcttgct actgatagct cttccatccc atcatctgac tcagtgtctc gccatcagct
     3841 gggatcacac cactagtccc tgtcctttaa cccatggaat gtaaatattg tatcatacgt
     3901 agaagaaaat actttttgtt ttctaaaaag gcattttgac atagtttaat gaaaacccgg
     3961 caggagcatt ctaagcccca ttagggaaaa aaaaaaaaaa aaaaaaaaaa ggaaatggtt
     4021 cctcttcgtc gccttaatgt gtaaagatca gaagtcactg agcagctcct cggagaagat
     4081 gcgaagtgac aggtggagcc tggcctctgt cccgctgtgt gtgcctctgt tgctccccct
     4141 gagaagtctg ggaaacagcg ctcctccctt ccccatcccg ctgcagctca atcccttgca
     4201 tcctctgggt ctgcagagca gagggtgctg gtggaggagc cagtacttct acaggctcgg
     4261 ggctgcctcg gtgtctgtcg gggtgggcag tacaggattc ctccctccta cctcaggcct
     4321 gatccatcat gccctggacg cggtacccta gagcttctta gctgactctg gctgtcacat
     4381 ctgttcttca cagagctcgc tgatgtgggt agaggcagaa tgcctctccc tgtccaatga
     4441 aagacaagag agtcgcttcc tagcttttgc acaaggctct tgtggttagg aataggttag
     4501 ggaaaggtca ctcctgattt cccagcagcc aatctgtcta tggagatttc ttgactcttt
     4561 gggaactctg agagctattc acaatatcag aagttccctc ttgagttctt ccttcttttg
     4621 gttctcagca cggccacagt gtacatgttt atggacaatg ctgtgctgga gagcagacag
     4681 aaggctgtgt gggaccaggg ggccctactt aggaggggga taggaagaca aaattttaac
     4741 actggtcata gtgacattgc cctcaccacg atccctctcc aaagtggtcg tctttcttta
     4801 ccttgtgtct tctcttgtaa aaataaaact caagaaaaaa aaaatacaag tgtcaaacta
     4861 aaaagaaaaa aaaatggaaa aagctaacat gaactgtgtg aaattgcata ctgctgtgac
     4921 gctaacctgc aatatgtaat gctatcttgt atgtggacct tgttaatgcg ccacacacgt
     4981 gcagaataaa gactgattct gattaaatag gca
//
