LOCUS       NM_009304               1524 bp    mRNA    linear   ROD 10-FEB-2025
DEFINITION  Mus musculus synaptogyrin 2 (Syngr2), mRNA.
ACCESSION   NM_009304 XM_916620 XM_924339
VERSION     NM_009304.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Beaton,N., Rudigier,C., Moest,H., Muller,S., Mrosek,N., Roder,E.,
            Rudofsky,G., Rulicke,T., Ukropec,J., Ukropcova,B., Augustin,R.,
            Neubauer,H. and Wolfrum,C.
  TITLE     TUSC5 regulates insulin-mediated adipose tissue glucose uptake by
            modulation of GLUT4 recycling
  JOURNAL   Mol Metab 4 (11), 795-810 (2015)
   PUBMED   26629404
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1524)
  AUTHORS   Li,L.V., Bakirtzi,K., Watson,R.T., Pessin,J.E. and Kandror,K.V.
  TITLE     The C-terminus of GLUT4 targets the transporter to the perinuclear
            compartment but not to the insulin-responsive vesicles
  JOURNAL   Biochem J 419 (1), 105-112 (2009)
   PUBMED   19076072
REFERENCE   4  (bases 1 to 1524)
  AUTHORS   Belfort,G.M. and Kandror,K.V.
  TITLE     Cellugyrin and synaptogyrin facilitate targeting of synaptophysin
            to a ubiquitous synaptic vesicle-sized compartment in PC12 cells
  JOURNAL   J Biol Chem 278 (48), 47971-47978 (2003)
   PUBMED   12928441
  REMARK    GeneRIF: Cellugyrin and synaptogyrin have roles in facilitating
            targeting of synaptophysin to a ubiquitous synaptic vesicle-sized
            compartment
REFERENCE   5  (bases 1 to 1524)
  AUTHORS   Kedra,D., Pan,H.Q., Seroussi,E., Fransson,I., Guilbaud,C.,
            Collins,J.E., Dunham,I., Blennow,E., Roe,B.A., Piehl,F. and
            Dumanski,J.P.
  TITLE     Characterization of the human synaptogyrin gene family
  JOURNAL   Hum Genet 103 (2), 131-141 (1998)
   PUBMED   9760194
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY146297.1, AK150234.1, AK089424.1 and BB368123.1.
            
            On Aug 12, 2009 this sequence version replaced NM_009304.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK150234.1, AK170681.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1                 BY146297.1         2-2
            2-679               AK150234.1         2-679
            680-1179            AK089424.1         680-1179
            1180-1519           AK150234.1         1180-1519
            1520-1524           BB368123.1         315-319
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 82.96 cM"
     gene            1..1524
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /note="synaptogyrin 2"
                     /db_xref="GeneID:20973"
                     /db_xref="MGI:MGI:1328324"
     exon            1..137
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..713
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /codon_start=1
                     /product="synaptogyrin-2"
                     /protein_id="NP_033330.1"
                     /db_xref="CCDS:CCDS25691.1"
                     /db_xref="GeneID:20973"
                     /db_xref="MGI:MGI:1328324"
                     /translation="MESGAYGAANAGGSFDLRRFLSQPQVVTRLVSMVLALIVFSCIF
                     GEGYTNIHTSDQLYCVFNQNEDACRYGSAIGVLAFLASAFFLVVDAFFSQISNATDRK
                     YLVIGDLLFSALWTFLWFVGFCFLTNQWAATKPQDVRVGADSARAAITFSFFSIFSWG
                     VLASLAYQRYKAGVDAFIQNYVDPTPDPNTAYASYPSASVENYQQPPFTQNVETTEGY
                     QPPPVY"
     exon            138..375
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /inference="alignment:Splign:2.1.0"
     exon            376..515
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /inference="alignment:Splign:2.1.0"
     exon            516..1524
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1503..1508
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /note="hexamer: AATAAA"
     polyA_site      1520
                     /gene="Syngr2"
                     /gene_synonym="cellugyrin; Clast2"
                     /note="major polyA site"
ORIGIN      
        1 tagttcccgg ccatccgcgg ctcggtggcg aaagcgacat ggagagcggg gcctatggcg
       61 cggccaacgc gggcggctcc ttcgacctgc ggcgcttcct gtctcagcct caggtggtga
      121 cgcgcctcgt gagcatggtc ttggccttga tcgtgttctc ctgcatcttc ggcgagggct
      181 acaccaacat tcacacatct gatcaactat actgtgtgtt caaccagaat gaggatgcct
      241 gccgctacgg cagcgccatc ggggtgctgg ccttcctggc ctcagccttc ttccttgtgg
      301 tcgatgcctt cttctcccag ataagcaatg ccactgaccg aaagtacctg gtcattggcg
      361 acctgctctt ctcagctctc tggaccttcc tgtggtttgt tggtttctgc ttcctgacca
      421 accagtgggc agccaccaaa cctcaagatg tccgggtggg tgcggactca gctcgggcag
      481 ccatcacctt cagcttcttc tccatctttt cctggggtgt gctggcttcc ctggcctacc
      541 agcgctacaa ggctggagtg gatgccttca ttcagaacta cgtggatccc accccggatc
      601 ccaacacagc ctatgcctcc taccctagtg cctccgtgga aaactaccag cagccgccct
      661 tcacccagaa tgtggagact actgagggct accagcctcc ccctgtgtac tgagcagcca
      721 gggacaagaa ggcagggaag gggtggttgg gagagggccg cccctctacc ctggacttct
      781 ctcaagggtt gctactcaca atgtagtccc ttgcctgtta cagttgacag ccaaagagtc
      841 cacgcctttc tgcctcccag ctgcagacag agcacacctg aagtgcccat gcccagctgg
      901 gcttcgccgc cgcccaccca atcctcaagg gcatttttga gatggttttg actagatctt
      961 tttatccccc accatagtac tgtagatagg acccagggct tggatttgct taaccagcgc
     1021 agccatccag ctgtgtgccc agctccttgt tgcttttagt aaccccgatc cccttctcag
     1081 agagccagaa gcaggtgcct gttagtgcta ccatgttttt gacccatgct agtttctcca
     1141 ctgggagccc caactctttc cccaaagcca agcttgggga tcctcgtgcc tgtctcccca
     1201 cgtcctcact caggttcagg agccagctct ctgctgtgtc ttctggggtc accactgtgc
     1261 caattgtccc caggctgcct gccaaccgtg ggacaggcag agggacaaga tgccacttcc
     1321 ttctttctcc cgctcctggc aggagggaca ggatttgcct ggagataaca cccagcttta
     1381 tgtaaatact accaagcagc ggttagatac tagtggggag ggcaggaacc cctgcactga
     1441 atgtattgga gactggtggg gatggccctg ccctcagatt ctatagacta gtttggagat
     1501 ggaataaacg gtttttctca gcgt
//
